RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 A0A0G2JPF8 293 aa4.24□□□□□ -1.73
CLK3-219ENST00000567805 CDHR4A6H8M9 788 aa4.24□□□□□ -1.73
CLK3-219ENST00000567805 TMEM247A6NEH6 219 aa4.24□□□□□ -1.73
CLK3-219ENST00000567805 CFAP73A6NFT4 308 aa4.24□□□□□ -1.73
CLK3-219ENST00000567805 ZNF716A6NP11 495 aa4.24□□□□□ -1.73
CLK3-219ENST00000567805 HNRNPCL2B2RXH8 293 aa4.24□□□□□ -1.73
CLK3-219ENST00000567805 ZNF814B7Z6K7 855 aa4.24□□□□□ -1.73
CLK3-219ENST00000567805 HNRNPCL3B7ZW38 293 aa4.24□□□□□ -1.73
CLK3-219ENST00000567805 AP3D1O14617 1153 aa4.24□□□□□ -1.73
CLK3-219ENST00000567805 GPR171O14626 319 aa4.24□□□□□ -1.73
CLK3-219ENST00000567805 POLR3GO15318 223 aaPredicted RBP4.24□□□□□ -1.73
CLK3-219ENST00000567805 ARHGEF9O43307 516 aa4.24□□□□□ -1.73
CLK3-219ENST00000567805 ZNF208O43345 1280 aa4.24□□□□□ -1.73
CLK3-219ENST00000567805 EIF1BO60739 113 aaKnown RBP4.24□□□□□ -1.73
CLK3-219ENST00000567805 HNRNPCL1O60812 293 aaKnown RBP4.24□□□□□ -1.73
CLK3-219ENST00000567805 SMPD2O60906 423 aa4.24□□□□□ -1.73
CLK3-219ENST00000567805 TMCC2O75069 709 aa4.24□□□□□ -1.73
CLK3-219ENST00000567805 ADAM11O75078 769 aa4.24□□□□□ -1.73
CLK3-219ENST00000567805 BCHEP06276 602 aa4.24□□□□□ -1.73
CLK3-219ENST00000567805 THBS1P07996 1170 aa4.24□□□□□ -1.73
CLK3-219ENST00000567805 TFPTP0C1Z6 253 aa4.24□□□□□ -1.73
CLK3-219ENST00000567805 HNRNPCL4P0DMR1 293 aa4.24□□□□□ -1.73
CLK3-219ENST00000567805 ETFAP13804 333 aa4.24□□□□□ -1.73
CLK3-219ENST00000567805 COX5AP20674 150 aa4.24□□□□□ -1.73
CLK3-219ENST00000567805 CRATP43155 626 aa4.24□□□□□ -1.73
CLK3-219ENST00000567805 MVDP53602 400 aa4.24□□□□□ -1.73
CLK3-219ENST00000567805 SLC16A1P53985 500 aa4.24□□□□□ -1.73
CLK3-219ENST00000567805 DSTNP60981 165 aa4.24□□□□□ -1.73
CLK3-219ENST00000567805 SLC35A1P78382 337 aa4.24□□□□□ -1.73
CLK3-219ENST00000567805 IRX1P78414 480 aaPredicted RBP4.24□□□□□ -1.73
CLK3-219ENST00000567805 H3F3AP84243 136 aa4.24□□□□□ -1.73
CLK3-219ENST00000567805 EPS8Q12929 822 aa4.24□□□□□ -1.73
CLK3-219ENST00000567805 FADDQ13158 208 aa4.24□□□□□ -1.73
CLK3-219ENST00000567805 LARS2Q15031 903 aaKnown RBP4.24□□□□□ -1.73
CLK3-219ENST00000567805 MAPK11Q15759 364 aa4.24□□□□□ -1.73
CLK3-219ENST00000567805 LIN52Q52LA3 116 aa4.24□□□□□ -1.73
CLK3-219ENST00000567805 C6orf10Q5SRN2 563 aa4.24□□□□□ -1.73
CLK3-219ENST00000567805 MRPL2Q5T653 305 aaKnown RBP4.24□□□□□ -1.73
CLK3-219ENST00000567805 RNF220Q5VTB9 566 aa4.24□□□□□ -1.73
CLK3-219ENST00000567805 PRAMEF8Q5VWM4 474 aa4.24□□□□□ -1.73
CLK3-219ENST00000567805 PRAMEF7Q5VXH5 474 aa4.24□□□□□ -1.73
CLK3-219ENST00000567805 PRSS57Q6UWY2 283 aa4.24□□□□□ -1.73
CLK3-219ENST00000567805 ZNF704Q6ZNC4 412 aaPredicted RBP4.24□□□□□ -1.73
CLK3-219ENST00000567805 BHLHA15Q7RTS1 189 aaPredicted RBP4.24□□□□□ -1.73
CLK3-219ENST00000567805 GALNT5Q7Z7M9 940 aa4.24□□□□□ -1.73
CLK3-219ENST00000567805 HMGN2P46Q86SG4 172 aa4.24□□□□□ -1.73
CLK3-219ENST00000567805 P2RY8Q86VZ1 359 aa4.24□□□□□ -1.73
CLK3-219ENST00000567805 ADGRG3Q86Y34 549 aa4.24□□□□□ -1.73
CLK3-219ENST00000567805 WFDC8Q8IUA0 241 aa4.24□□□□□ -1.73
CLK3-219ENST00000567805 KRTAP1-3Q8IUG1 177 aa4.24□□□□□ -1.73
CLK3-219ENST00000567805 ZNF100Q8IYN0 542 aa4.24□□□□□ -1.73
CLK3-219ENST00000567805 GOLGA6L1Q8N7Z2 621 aa4.24□□□□□ -1.73
CLK3-219ENST00000567805 WFDC11Q8NEX6 87 aa4.24□□□□□ -1.73
CLK3-219ENST00000567805 OR9I1Q8NGQ6 314 aa4.24□□□□□ -1.73
CLK3-219ENST00000567805 OR52P1PQ8NH57 321 aa4.24□□□□□ -1.73
CLK3-219ENST00000567805 SLC38A5Q8WUX1 472 aa4.24□□□□□ -1.73
CLK3-219ENST00000567805 DYDC1Q8WWB3 177 aa4.24□□□□□ -1.73
CLK3-219ENST00000567805 GTF2H4Q92759 462 aa4.24□□□□□ -1.73
CLK3-219ENST00000567805 VPS33AQ96AX1 596 aa4.24□□□□□ -1.73
CLK3-219ENST00000567805 S100PBPQ96BU1 408 aa4.24□□□□□ -1.73
CLK3-219ENST00000567805 ARL5BQ96KC2 179 aa4.24□□□□□ -1.73
CLK3-219ENST00000567805 ATP6V1G3Q96LB4 118 aa4.24□□□□□ -1.73
CLK3-219ENST00000567805 ZNF300Q96RE9 604 aaPredicted RBP4.24□□□□□ -1.73
CLK3-219ENST00000567805 TMEM204Q9BSN7 226 aa4.24□□□□□ -1.73
CLK3-219ENST00000567805 NAA11Q9BSU3 229 aaPredicted RBP4.24□□□□□ -1.73
CLK3-219ENST00000567805 CCDC28BQ9BUN5 200 aa4.24□□□□□ -1.73
CLK3-219ENST00000567805 POTEKPQ9BYX7 375 aa4.24□□□□□ -1.73
CLK3-219ENST00000567805 OR11A1Q9GZK7 315 aa4.24□□□□□ -1.73
CLK3-219ENST00000567805 ADAM19Q9H013 955 aa4.24□□□□□ -1.73
CLK3-219ENST00000567805 PAIP1Q9H074 479 aaKnown RBP4.24□□□□□ -1.73
CLK3-219ENST00000567805 RAD21L1Q9H4I0 556 aa4.24□□□□□ -1.73
CLK3-219ENST00000567805 ARMC7Q9H6L4 198 aa4.24□□□□□ -1.73
CLK3-219ENST00000567805 ESRP2Q9H6T0 727 aaKnown RBP4.24□□□□□ -1.73
CLK3-219ENST00000567805 TPT1P8Q9HAU6 139 aa4.24□□□□□ -1.73
CLK3-219ENST00000567805 CACYBPQ9HB71 228 aaKnown RBP4.24□□□□□ -1.73
CLK3-219ENST00000567805 SLCO1B3Q9NPD5 702 aa4.24□□□□□ -1.73
CLK3-219ENST00000567805 TCF7L2Q9NQB0 619 aa4.24□□□□□ -1.73
CLK3-219ENST00000567805 DLL4Q9NR61 685 aa4.24□□□□□ -1.73
CLK3-219ENST00000567805 TMEM45AQ9NWC5 275 aa4.24□□□□□ -1.73
CLK3-219ENST00000567805 TMEM181Q9P2C4 612 aa4.24□□□□□ -1.73
CLK3-219ENST00000567805 PRSS50Q9UI38 385 aa4.24□□□□□ -1.73
CLK3-219ENST00000567805 OSGIN1Q9UJX0 560 aa4.24□□□□□ -1.73
CLK3-219ENST00000567805 ZNF232Q9UNY5 417 aa4.24□□□□□ -1.73
CLK3-219ENST00000567805 TRAPPC4Q9Y296 219 aa4.24□□□□□ -1.73
CLK3-219ENST00000567805 ZNF443Q9Y2A4 671 aaPredicted RBP4.24□□□□□ -1.73
CLK3-219ENST00000567805 TMED7Q9Y3B3 224 aa4.24□□□□□ -1.73
CLK3-219ENST00000567805 PCDHB14Q9Y5E9 798 aa4.24□□□□□ -1.73
CLK3-219ENST00000567805 PRR14LQ5THK1 2151 aa4.23□□□□□ -1.73
CLK3-219ENST00000567805 A0A096LPI6 279 aa4.23□□□□□ -1.73
CLK3-219ENST00000567805 TMEM72A0PK05 275 aa4.23□□□□□ -1.73
CLK3-219ENST00000567805 HMGB1P1B2RPK0 211 aaPredicted RBP4.23□□□□□ -1.73
CLK3-219ENST00000567805 TMEM229AB2RXF0 380 aa4.23□□□□□ -1.73
CLK3-219ENST00000567805 C5orf58C9J3I9 102 aa4.23□□□□□ -1.73
CLK3-219ENST00000567805 CLIC1O00299 241 aa4.23□□□□□ -1.73
CLK3-219ENST00000567805 HS3ST1O14792 307 aa4.23□□□□□ -1.73
CLK3-219ENST00000567805 MRPL33O75394 65 aaKnown RBP4.23□□□□□ -1.73
CLK3-219ENST00000567805 LYZL6O75951 148 aa4.23□□□□□ -1.73
CLK3-219ENST00000567805 PLAUP00749 431 aa4.23□□□□□ -1.73
CLK3-219ENST00000567805 GPIP06744 558 aa4.23□□□□□ -1.73
CLK3-219ENST00000567805 CD3EP07766 207 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms