RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, human

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SF3B3-209	ENST00000567635	OR9I1	Q8NGQ6	314 aa		6.14	□□□□□ -1.43
SF3B3-209	ENST00000567635	OR52P1P	Q8NH57	321 aa		6.14	□□□□□ -1.43
SF3B3-209	ENST00000567635	WDR60	Q8WVS4	1066 aa		6.14	□□□□□ -1.43
SF3B3-209	ENST00000567635	DYDC1	Q8WWB3	177 aa		6.14	□□□□□ -1.43
SF3B3-209	ENST00000567635	HSD17B8	Q92506	261 aa		6.14	□□□□□ -1.43
SF3B3-209	ENST00000567635	PIGT	Q969N2	578 aa		6.14	□□□□□ -1.43
SF3B3-209	ENST00000567635	S100PBP	Q96BU1	408 aa		6.14	□□□□□ -1.43
SF3B3-209	ENST00000567635	DDIT4L	Q96D03	193 aa		6.14	□□□□□ -1.43
SF3B3-209	ENST00000567635	ZHX1-C8orf76	Q96EF9	292 aa		6.14	□□□□□ -1.43
SF3B3-209	ENST00000567635	AURKB	Q96GD4	344 aa	Predicted RBP	6.14	□□□□□ -1.43
SF3B3-209	ENST00000567635	ARL5B	Q96KC2	179 aa		6.14	□□□□□ -1.43
SF3B3-209	ENST00000567635	PSD2	Q9BQI7	771 aa		6.14	□□□□□ -1.43
SF3B3-209	ENST00000567635	CCDC28B	Q9BUN5	200 aa		6.14	□□□□□ -1.43
SF3B3-209	ENST00000567635	OR11A1	Q9GZK7	315 aa		6.14	□□□□□ -1.43
SF3B3-209	ENST00000567635	ADAM19	Q9H013	955 aa		6.14	□□□□□ -1.43
SF3B3-209	ENST00000567635	PAIP1	Q9H074	479 aa	Known RBP	6.14	□□□□□ -1.43
SF3B3-209	ENST00000567635	RAD21L1	Q9H4I0	556 aa		6.14	□□□□□ -1.43
SF3B3-209	ENST00000567635	ARMC7	Q9H6L4	198 aa		6.14	□□□□□ -1.43
SF3B3-209	ENST00000567635	INTS9	Q9NV88	658 aa	Known RBP	6.14	□□□□□ -1.43
SF3B3-209	ENST00000567635	RLIM	Q9NVW2	624 aa		6.14	□□□□□ -1.43
SF3B3-209	ENST00000567635	TMEM45A	Q9NWC5	275 aa		6.14	□□□□□ -1.43
SF3B3-209	ENST00000567635	EMC3	Q9P0I2	261 aa		6.14	□□□□□ -1.43
SF3B3-209	ENST00000567635	TMEM181	Q9P2C4	612 aa		6.14	□□□□□ -1.43
SF3B3-209	ENST00000567635	P2RX2	Q9UBL9	471 aa		6.14	□□□□□ -1.43
SF3B3-209	ENST00000567635	OSGIN1	Q9UJX0	560 aa		6.14	□□□□□ -1.43
SF3B3-209	ENST00000567635	ING1	Q9UK53	422 aa	Predicted RBP	6.14	□□□□□ -1.43
SF3B3-209	ENST00000567635	TMED7	Q9Y3B3	224 aa		6.14	□□□□□ -1.43
SF3B3-209	ENST00000567635	IGKV3D-15	A0A087WSY6	115 aa		6.13	□□□□□ -1.43
SF3B3-209	ENST00000567635		A0A096LPI6	279 aa		6.13	□□□□□ -1.43
SF3B3-209	ENST00000567635	MBD3L2B	A0A1B0GVZ6	204 aa	Predicted RBP	6.13	□□□□□ -1.43
SF3B3-209	ENST00000567635	CDHR4	A6H8M9	788 aa		6.13	□□□□□ -1.43
SF3B3-209	ENST00000567635	AP3D1	O14617	1153 aa		6.13	□□□□□ -1.43
SF3B3-209	ENST00000567635	ARHGEF9	O43307	516 aa		6.13	□□□□□ -1.43
SF3B3-209	ENST00000567635	ZNF208	O43345	1280 aa		6.13	□□□□□ -1.43
SF3B3-209	ENST00000567635	DNPH1	O43598	174 aa		6.13	□□□□□ -1.43
SF3B3-209	ENST00000567635	EIF1B	O60739	113 aa	Known RBP	6.13	□□□□□ -1.43
SF3B3-209	ENST00000567635	SMPD2	O60906	423 aa		6.13	□□□□□ -1.43
SF3B3-209	ENST00000567635	CNOT4	O95628	575 aa	Known RBP	6.13	□□□□□ -1.43
SF3B3-209	ENST00000567635	BCHE	P06276	602 aa		6.13	□□□□□ -1.43
SF3B3-209	ENST00000567635	GKN3P	P0CG01	181 aa		6.13	□□□□□ -1.43
SF3B3-209	ENST00000567635	FOSL1	P15407	271 aa		6.13	□□□□□ -1.43
SF3B3-209	ENST00000567635	CXCR1	P25024	350 aa		6.13	□□□□□ -1.43
SF3B3-209	ENST00000567635	TACR3	P29371	465 aa		6.13	□□□□□ -1.43
SF3B3-209	ENST00000567635	HOXC12	P31275	282 aa		6.13	□□□□□ -1.43
SF3B3-209	ENST00000567635	ACAA2	P42765	397 aa	Known RBP	6.13	□□□□□ -1.43
SF3B3-209	ENST00000567635	AQP5	P55064	265 aa		6.13	□□□□□ -1.43
SF3B3-209	ENST00000567635	RIPPLY3	P57055	190 aa		6.13	□□□□□ -1.43
SF3B3-209	ENST00000567635	COPZ1	P61923	177 aa		6.13	□□□□□ -1.43
SF3B3-209	ENST00000567635	GNGT1	P63211	74 aa		6.13	□□□□□ -1.43
SF3B3-209	ENST00000567635	SLC35A1	P78382	337 aa		6.13	□□□□□ -1.43
SF3B3-209	ENST00000567635	NKX6-1	P78426	367 aa	Predicted RBP	6.13	□□□□□ -1.43
SF3B3-209	ENST00000567635	GUCY1A3	Q02108	690 aa		6.13	□□□□□ -1.43
SF3B3-209	ENST00000567635	PLAUR	Q03405	335 aa		6.13	□□□□□ -1.43
SF3B3-209	ENST00000567635	EPS8	Q12929	822 aa		6.13	□□□□□ -1.43
SF3B3-209	ENST00000567635	RGN	Q15493	299 aa		6.13	□□□□□ -1.43
SF3B3-209	ENST00000567635	TSC22D1	Q15714	1073 aa		6.13	□□□□□ -1.43
SF3B3-209	ENST00000567635	GTDC1	Q4AE62	458 aa		6.13	□□□□□ -1.43
SF3B3-209	ENST00000567635	LIN52	Q52LA3	116 aa		6.13	□□□□□ -1.43
SF3B3-209	ENST00000567635	PRAMEF8	Q5VWM4	474 aa		6.13	□□□□□ -1.43
SF3B3-209	ENST00000567635	PRAMEF7	Q5VXH5	474 aa		6.13	□□□□□ -1.43
SF3B3-209	ENST00000567635	SHE	Q5VZ18	495 aa		6.13	□□□□□ -1.43
SF3B3-209	ENST00000567635	ALKBH2	Q6NS38	261 aa		6.13	□□□□□ -1.43
SF3B3-209	ENST00000567635	SLC2A7	Q6PXP3	512 aa		6.13	□□□□□ -1.43
SF3B3-209	ENST00000567635	C20orf204	Q6ZNR8	217 aa		6.13	□□□□□ -1.43
SF3B3-209	ENST00000567635		Q6ZT83	130 aa		6.13	□□□□□ -1.43
SF3B3-209	ENST00000567635	BHLHA15	Q7RTS1	189 aa	Predicted RBP	6.13	□□□□□ -1.43
SF3B3-209	ENST00000567635	FUNDC1	Q8IVP5	155 aa		6.13	□□□□□ -1.43
SF3B3-209	ENST00000567635	CCDC103	Q8IW40	242 aa		6.13	□□□□□ -1.43
SF3B3-209	ENST00000567635	CLIP4	Q8N3C7	705 aa		6.13	□□□□□ -1.43
SF3B3-209	ENST00000567635	PIGX	Q8TBF5	258 aa		6.13	□□□□□ -1.43
SF3B3-209	ENST00000567635	CKAP2	Q8WWK9	683 aa		6.13	□□□□□ -1.43
SF3B3-209	ENST00000567635	KISS1R	Q969F8	398 aa	Predicted RBP	6.13	□□□□□ -1.43
SF3B3-209	ENST00000567635	SPDL1	Q96EA4	605 aa		6.13	□□□□□ -1.43
SF3B3-209	ENST00000567635	DNAJA3	Q96EY1	480 aa		6.13	□□□□□ -1.43
SF3B3-209	ENST00000567635	PLPPR2	Q96GM1	343 aa		6.13	□□□□□ -1.43
SF3B3-209	ENST00000567635	TMEM19	Q96HH6	336 aa		6.13	□□□□□ -1.43
SF3B3-209	ENST00000567635	ZNF300	Q96RE9	604 aa	Predicted RBP	6.13	□□□□□ -1.43
SF3B3-209	ENST00000567635	PIP5K1A	Q99755	562 aa		6.13	□□□□□ -1.43
SF3B3-209	ENST00000567635	EBF4	Q9BQW3	602 aa		6.13	□□□□□ -1.43
SF3B3-209	ENST00000567635	NAA11	Q9BSU3	229 aa	Predicted RBP	6.13	□□□□□ -1.43
SF3B3-209	ENST00000567635	SPATA9	Q9BWV2	254 aa		6.13	□□□□□ -1.43
SF3B3-209	ENST00000567635	POTEKP	Q9BYX7	375 aa		6.13	□□□□□ -1.43
SF3B3-209	ENST00000567635	UBTD1	Q9HAC8	227 aa		6.13	□□□□□ -1.43
SF3B3-209	ENST00000567635	CACYBP	Q9HB71	228 aa	Known RBP	6.13	□□□□□ -1.43
SF3B3-209	ENST00000567635	A4GALT	Q9NPC4	353 aa		6.13	□□□□□ -1.43
SF3B3-209	ENST00000567635	NGB	Q9NPG2	151 aa		6.13	□□□□□ -1.43
SF3B3-209	ENST00000567635	PRSS50	Q9UI38	385 aa		6.13	□□□□□ -1.43
SF3B3-209	ENST00000567635	NOSIP	Q9Y314	301 aa	Known RBP	6.13	□□□□□ -1.43
SF3B3-209	ENST00000567635	IFT52	Q9Y366	437 aa		6.13	□□□□□ -1.43
SF3B3-209	ENST00000567635	DSPP	Q9NZW4	1301 aa		6.13	□□□□□ -1.43
SF3B3-209	ENST00000567635	NIPBL	Q6KC79	2804 aa	eCLIP	6.13	□□□□□ -1.43
SF3B3-209	ENST00000567635	YLPM1	P49750	1951 aa	Known RBP	6.13	□□□□□ -1.43
SF3B3-209	ENST00000567635	ARFGEF3	Q5TH69	2177 aa		6.13	□□□□□ -1.43
SF3B3-209	ENST00000567635	ABCA1	O95477	2261 aa		6.13	□□□□□ -1.43
SF3B3-209	ENST00000567635	TMEM72	A0PK05	275 aa		6.12	□□□□□ -1.43
SF3B3-209	ENST00000567635	GMNC	A6NCL1	334 aa		6.12	□□□□□ -1.43
SF3B3-209	ENST00000567635	ZNF716	A6NP11	495 aa		6.12	□□□□□ -1.43
SF3B3-209	ENST00000567635	C5orf58	C9J3I9	102 aa		6.12	□□□□□ -1.43
SF3B3-209	ENST00000567635		H0YHG0	523 aa		6.12	□□□□□ -1.43
SF3B3-209	ENST00000567635	NR5A2	O00482	541 aa		6.12	□□□□□ -1.43

Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms