RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 ZC4H2Q9NQZ6 224 aa2.84□□□□□ -1.95
HERPUD1-211ENST00000566550 TAAR2Q9P1P5 351 aa2.84□□□□□ -1.95
HERPUD1-211ENST00000566550 CLN8Q9UBY8 286 aa2.84□□□□□ -1.95
HERPUD1-211ENST00000566550 BARX2Q9UMQ3 279 aaPredicted RBP2.84□□□□□ -1.95
HERPUD1-211ENST00000566550 GAB2Q9UQC2 676 aa2.84□□□□□ -1.95
HERPUD1-211ENST00000566550 KCNIP3Q9Y2W7 256 aa2.84□□□□□ -1.95
HERPUD1-211ENST00000566550 MMP24Q9Y5R2 645 aa2.84□□□□□ -1.95
HERPUD1-211ENST00000566550 PBRM1Q86U86 1689 aa2.84□□□□□ -1.95
HERPUD1-211ENST00000566550 CNTNAP2Q9UHC6 1331 aa2.84□□□□□ -1.96
HERPUD1-211ENST00000566550 AKNAQ7Z591 1439 aa2.84□□□□□ -1.96
HERPUD1-211ENST00000566550 PRG4Q92954 1404 aaPredicted RBP2.84□□□□□ -1.96
HERPUD1-211ENST00000566550 A0A1W2PR80 420 aa2.83□□□□□ -1.96
HERPUD1-211ENST00000566550 TCRBV9S1A1TA0A576 114 aa2.83□□□□□ -1.96
HERPUD1-211ENST00000566550 TMEM120BA0PK00 339 aa2.83□□□□□ -1.96
HERPUD1-211ENST00000566550 E7ENQ6 273 aa2.83□□□□□ -1.96
HERPUD1-211ENST00000566550 FBP2O00757 339 aa2.83□□□□□ -1.96
HERPUD1-211ENST00000566550 TM9SF1O15321 606 aa2.83□□□□□ -1.96
HERPUD1-211ENST00000566550 INPP4BO15327 924 aa2.83□□□□□ -1.96
HERPUD1-211ENST00000566550 GPAA1O43292 621 aa2.83□□□□□ -1.96
HERPUD1-211ENST00000566550 ZNF749O43361 778 aa2.83□□□□□ -1.96
HERPUD1-211ENST00000566550 HSBP1O75506 76 aa2.83□□□□□ -1.96
HERPUD1-211ENST00000566550 KHDRBS3O75525 346 aaKnown RBP2.83□□□□□ -1.96
HERPUD1-211ENST00000566550 CDK14O94921 469 aa2.83□□□□□ -1.96
HERPUD1-211ENST00000566550 CCNB2O95067 398 aa2.83□□□□□ -1.96
HERPUD1-211ENST00000566550 TSPAN13O95857 204 aa2.83□□□□□ -1.96
HERPUD1-211ENST00000566550 PIGRP01833 764 aa2.83□□□□□ -1.96
HERPUD1-211ENST00000566550 IFNW1P05000 195 aa2.83□□□□□ -1.96
HERPUD1-211ENST00000566550 KRT16P08779 473 aa2.83□□□□□ -1.96
HERPUD1-211ENST00000566550 ACAA1P09110 424 aaPredicted RBP2.83□□□□□ -1.96
HERPUD1-211ENST00000566550 BCKDHAP12694 445 aa2.83□□□□□ -1.96
HERPUD1-211ENST00000566550 ZNF43P17038 809 aa2.83□□□□□ -1.96
HERPUD1-211ENST00000566550 IL12BP29460 328 aa2.83□□□□□ -1.96
HERPUD1-211ENST00000566550 SLC26A3P40879 764 aa2.83□□□□□ -1.96
HERPUD1-211ENST00000566550 LEPP41159 167 aa2.83□□□□□ -1.96
HERPUD1-211ENST00000566550 TMED10P49755 219 aaKnown RBP2.83□□□□□ -1.96
HERPUD1-211ENST00000566550 PDLIM4P50479 330 aa2.83□□□□□ -1.96
HERPUD1-211ENST00000566550 ARHGDIAP52565 204 aa2.83□□□□□ -1.96
HERPUD1-211ENST00000566550 ELLP55199 621 aaPredicted RBP2.83□□□□□ -1.96
HERPUD1-211ENST00000566550 GSTO1P78417 241 aa2.83□□□□□ -1.96
HERPUD1-211ENST00000566550 DHODHQ02127 395 aa2.83□□□□□ -1.96
HERPUD1-211ENST00000566550 ZNF85Q03923 595 aa2.83□□□□□ -1.96
HERPUD1-211ENST00000566550 GAGE5Q13069 117 aa2.83□□□□□ -1.96
HERPUD1-211ENST00000566550 GAGE6Q13070 117 aa2.83□□□□□ -1.96
HERPUD1-211ENST00000566550 SRSF7Q16629 238 aaKnown RBP eCLIP2.83□□□□□ -1.96
HERPUD1-211ENST00000566550 MS4A18Q3C1V0 323 aa2.83□□□□□ -1.96
HERPUD1-211ENST00000566550 KLHL22Q53GT1 634 aa2.83□□□□□ -1.96
HERPUD1-211ENST00000566550 VWA2Q5GFL6 755 aa2.83□□□□□ -1.96
HERPUD1-211ENST00000566550 TECRLQ5HYJ1 363 aa2.83□□□□□ -1.96
HERPUD1-211ENST00000566550 ACER2Q5QJU3 275 aa2.83□□□□□ -1.96
HERPUD1-211ENST00000566550 PXDC1Q5TGL8 231 aa2.83□□□□□ -1.96
HERPUD1-211ENST00000566550 ZNF626Q68DY1 528 aa2.83□□□□□ -1.96
HERPUD1-211ENST00000566550 FAHD2BQ6P2I3 314 aaPredicted RBP2.83□□□□□ -1.96
HERPUD1-211ENST00000566550 ZNF836Q6ZNA1 936 aa2.83□□□□□ -1.96
HERPUD1-211ENST00000566550 MBOAT1Q6ZNC8 495 aa2.83□□□□□ -1.96
HERPUD1-211ENST00000566550 FRA10AC1Q70Z53 315 aa2.83□□□□□ -1.96
HERPUD1-211ENST00000566550 PGAP1Q75T13 922 aa2.83□□□□□ -1.96
HERPUD1-211ENST00000566550 PTAR1Q7Z6K3 402 aaPredicted RBP2.83□□□□□ -1.96
HERPUD1-211ENST00000566550 SLC47A2Q86VL8 602 aa2.83□□□□□ -1.96
HERPUD1-211ENST00000566550 LACC1Q8IV20 430 aa2.83□□□□□ -1.96
HERPUD1-211ENST00000566550 MYOCDQ8IZQ8 938 aa2.83□□□□□ -1.96
HERPUD1-211ENST00000566550 BPIFB2Q8N4F0 458 aa2.83□□□□□ -1.96
HERPUD1-211ENST00000566550 RAB42Q8N4Z0 105 aa2.83□□□□□ -1.96
HERPUD1-211ENST00000566550 NRACQ8N912 160 aa2.83□□□□□ -1.96
HERPUD1-211ENST00000566550 TRPV1Q8NER1 839 aa2.83□□□□□ -1.96
HERPUD1-211ENST00000566550 OR52H1Q8NGJ2 320 aa2.83□□□□□ -1.96
HERPUD1-211ENST00000566550 OR13A1Q8NGR1 328 aa2.83□□□□□ -1.96
HERPUD1-211ENST00000566550 OR5B3Q8NH48 314 aa2.83□□□□□ -1.96
HERPUD1-211ENST00000566550 RFESDQ8TAC1 157 aa2.83□□□□□ -1.96
HERPUD1-211ENST00000566550 LNX1Q8TBB1 728 aaPredicted RBP2.83□□□□□ -1.96
HERPUD1-211ENST00000566550 TCP10LQ8TDR4 215 aa2.83□□□□□ -1.96
HERPUD1-211ENST00000566550 PCNPQ8WW12 178 aaKnown RBP2.83□□□□□ -1.96
HERPUD1-211ENST00000566550 CAPSLQ8WWF8 208 aa2.83□□□□□ -1.96
HERPUD1-211ENST00000566550 TRUB1Q8WWH5 349 aaKnown RBP2.83□□□□□ -1.96
HERPUD1-211ENST00000566550 CIDECQ96AQ7 238 aaPredicted RBP2.83□□□□□ -1.96
HERPUD1-211ENST00000566550 APH1AQ96BI3 265 aa2.83□□□□□ -1.96
HERPUD1-211ENST00000566550 C8orf44Q96CB5 159 aa2.83□□□□□ -1.96
HERPUD1-211ENST00000566550 FAF2Q96CS3 445 aa2.83□□□□□ -1.96
HERPUD1-211ENST00000566550 FAHD2AQ96GK7 314 aa2.83□□□□□ -1.96
HERPUD1-211ENST00000566550 ZBED3Q96IU2 234 aaPredicted RBP2.83□□□□□ -1.96
HERPUD1-211ENST00000566550 PELOQ9BRX2 385 aaKnown RBP2.83□□□□□ -1.96
HERPUD1-211ENST00000566550 TMEM175Q9BSA9 504 aa2.83□□□□□ -1.96
HERPUD1-211ENST00000566550 UCK2Q9BZX2 261 aa2.83□□□□□ -1.96
HERPUD1-211ENST00000566550 IL25Q9H293 177 aa2.83□□□□□ -1.96
HERPUD1-211ENST00000566550 RBKSQ9H477 322 aa2.83□□□□□ -1.96
HERPUD1-211ENST00000566550 GAREM1Q9H706 876 aa2.83□□□□□ -1.96
HERPUD1-211ENST00000566550 ATP13A3Q9H7F0 1226 aa2.83□□□□□ -1.96
HERPUD1-211ENST00000566550 NT5DC2Q9H857 520 aa2.83□□□□□ -1.96
HERPUD1-211ENST00000566550 ELL3Q9HB65 397 aaPredicted RBP2.83□□□□□ -1.96
HERPUD1-211ENST00000566550 LY9Q9HBG7 655 aa2.83□□□□□ -1.96
HERPUD1-211ENST00000566550 RETNQ9HD89 108 aa2.83□□□□□ -1.96
HERPUD1-211ENST00000566550 SIX2Q9NPC8 291 aa2.83□□□□□ -1.96
HERPUD1-211ENST00000566550 IL26Q9NPH9 171 aa2.83□□□□□ -1.96
HERPUD1-211ENST00000566550 ZNF302Q9NR11 478 aa2.83□□□□□ -1.96
HERPUD1-211ENST00000566550 TXLNGQ9NUQ3 528 aa2.83□□□□□ -1.96
HERPUD1-211ENST00000566550 WWOXQ9NZC7 414 aa2.83□□□□□ -1.96
HERPUD1-211ENST00000566550 GALPQ9UBC7 116 aa2.83□□□□□ -1.96
HERPUD1-211ENST00000566550 LNPEPQ9UIQ6 1025 aa2.83□□□□□ -1.96
HERPUD1-211ENST00000566550 TMCO1Q9UM00 188 aa2.83□□□□□ -1.96
HERPUD1-211ENST00000566550 COPS3Q9UNS2 423 aa2.83□□□□□ -1.96
HERPUD1-211ENST00000566550 NTNG1Q9Y2I2 539 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms