RNA–Protein interactions for RNA: ENST00000566292.5

USB1-213, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-213ENST00000566292 GLB1L3Q8NCI6 653 aaPredicted RBP16.16■□□□□ 0.18
USB1-213ENST00000566292 SMAP2Q8WU79 429 aaPredicted RBP16.16■□□□□ 0.18
USB1-213ENST00000566292 ZBTB18Q99592 522 aa16.16■□□□□ 0.18
USB1-213ENST00000566292 MTHFD2LQ9H903 347 aaPredicted RBP16.16■□□□□ 0.18
USB1-213ENST00000566292 TMEM181Q9P2C4 612 aa16.16■□□□□ 0.18
USB1-213ENST00000566292 TRAPPC4Q9Y296 219 aa16.16■□□□□ 0.18
USB1-213ENST00000566292 MAGED1Q9Y5V3 778 aaPredicted RBP16.16■□□□□ 0.18
USB1-213ENST00000566292 JMJD1CQ15652 2540 aa16.16■□□□□ 0.18
USB1-213ENST00000566292 HEATR1Q9H583 2144 aaKnown RBP16.15■□□□□ 0.18
USB1-213ENST00000566292 OR5H1A6NKK0 313 aa16.15■□□□□ 0.18
USB1-213ENST00000566292 SHISA9B4DS77 424 aa16.15■□□□□ 0.18
USB1-213ENST00000566292 FAAHO00519 579 aa16.15■□□□□ 0.18
USB1-213ENST00000566292 RFXANKO14593 260 aa16.15■□□□□ 0.18
USB1-213ENST00000566292 RAD51DO75771 328 aa16.15■□□□□ 0.18
USB1-213ENST00000566292 NR2F1P10589 423 aa16.15■□□□□ 0.18
USB1-213ENST00000566292 IDO1P14902 403 aa16.15■□□□□ 0.18
USB1-213ENST00000566292 IL7RP16871 459 aa16.15■□□□□ 0.18
USB1-213ENST00000566292 TACR3P29371 465 aa16.15■□□□□ 0.18
USB1-213ENST00000566292 POLR2HP52434 150 aaKnown RBP16.15■□□□□ 0.18
USB1-213ENST00000566292 SLC18A1P54219 525 aa16.15■□□□□ 0.18
USB1-213ENST00000566292 EPS8Q12929 822 aa16.15■□□□□ 0.18
USB1-213ENST00000566292 PGGHGQ32M88 737 aa16.15■□□□□ 0.18
USB1-213ENST00000566292 APH1AQ96BI3 265 aa16.15■□□□□ 0.18
USB1-213ENST00000566292 MUCL1Q96DR8 90 aa16.15■□□□□ 0.18
USB1-213ENST00000566292 MANSC1Q9H8J5 431 aa16.15■□□□□ 0.18
USB1-213ENST00000566292 ZC3H12DA2A288 527 aaKnown RBP16.14■□□□□ 0.17
USB1-213ENST00000566292 CFAP73A6NFT4 308 aa16.14■□□□□ 0.17
USB1-213ENST00000566292 SLCO1B7G3V0H7 640 aa16.14■□□□□ 0.17
USB1-213ENST00000566292 GPR171O14626 319 aa16.14■□□□□ 0.17
USB1-213ENST00000566292 ZNF208O43345 1280 aa16.14■□□□□ 0.17
USB1-213ENST00000566292 SLC22A3O75751 556 aa16.14■□□□□ 0.17
USB1-213ENST00000566292 KRT75O95678 551 aa16.14■□□□□ 0.17
USB1-213ENST00000566292 IL6P05231 212 aa16.14■□□□□ 0.17
USB1-213ENST00000566292 DBIP07108 87 aaKnown RBP16.14■□□□□ 0.17
USB1-213ENST00000566292 CDKN1AP38936 164 aa16.14■□□□□ 0.17
USB1-213ENST00000566292 SLC1A3P43003 542 aa16.14■□□□□ 0.17
USB1-213ENST00000566292 MAGEA8P43361 318 aa16.14■□□□□ 0.17
USB1-213ENST00000566292 FOXG1P55316 489 aaPredicted RBP16.14■□□□□ 0.17
USB1-213ENST00000566292 MAGOHP61326 146 aaKnown RBP16.14■□□□□ 0.17
USB1-213ENST00000566292 TNK1Q13470 666 aa16.14■□□□□ 0.17
USB1-213ENST00000566292 GTDC1Q4AE62 458 aa16.14■□□□□ 0.17
USB1-213ENST00000566292 ATG16L1Q676U5 607 aa16.14■□□□□ 0.17
USB1-213ENST00000566292 P2RY8Q86VZ1 359 aa16.14■□□□□ 0.17
USB1-213ENST00000566292 VRK2Q86Y07 508 aa16.14■□□□□ 0.17
USB1-213ENST00000566292 UBE2J2Q8N2K1 259 aa16.14■□□□□ 0.17
USB1-213ENST00000566292 PMM1Q92871 262 aa16.14■□□□□ 0.17
USB1-213ENST00000566292 TLCD1Q96CP7 247 aa16.14■□□□□ 0.17
USB1-213ENST00000566292 DDIT4LQ96D03 193 aa16.14■□□□□ 0.17
USB1-213ENST00000566292 ADAM19Q9H013 955 aa16.14■□□□□ 0.17
USB1-213ENST00000566292 RLIMQ9NVW2 624 aa16.14■□□□□ 0.17
USB1-213ENST00000566292 MALT1Q9UDY8 824 aa16.14■□□□□ 0.17
USB1-213ENST00000566292 DSPPQ9NZW4 1301 aa16.14■□□□□ 0.17
USB1-213ENST00000566292 A0A1W2PP18 115 aa16.13■□□□□ 0.17
USB1-213ENST00000566292 ABCD4O14678 606 aa16.13■□□□□ 0.17
USB1-213ENST00000566292 MRPL33O75394 65 aaKnown RBP16.13■□□□□ 0.17
USB1-213ENST00000566292 CD8AP01732 235 aa16.13■□□□□ 0.17
USB1-213ENST00000566292 THBS1P07996 1170 aa16.13■□□□□ 0.17
USB1-213ENST00000566292 ETFAP13804 333 aa16.13■□□□□ 0.17
USB1-213ENST00000566292 PCSK6P29122 969 aa16.13■□□□□ 0.17
USB1-213ENST00000566292 SLC35A1P78382 337 aa16.13■□□□□ 0.17
USB1-213ENST00000566292 FAPQ12884 760 aa16.13■□□□□ 0.17
USB1-213ENST00000566292 GNA13Q14344 377 aa16.13■□□□□ 0.17
USB1-213ENST00000566292 ZNF836Q6ZNA1 936 aa16.13■□□□□ 0.17
USB1-213ENST00000566292 SSX8Q7RTT4 187 aa16.13■□□□□ 0.17
USB1-213ENST00000566292 PEX5LQ8IYB4 626 aa16.13■□□□□ 0.17
USB1-213ENST00000566292 OR9I1Q8NGQ6 314 aa16.13■□□□□ 0.17
USB1-213ENST00000566292 TRMT61AQ96FX7 289 aaKnown RBP16.13■□□□□ 0.17
USB1-213ENST00000566292 OR52B2Q96RD2 323 aa16.13■□□□□ 0.17
USB1-213ENST00000566292 TRAF4Q9BUZ4 470 aaPredicted RBP16.13■□□□□ 0.17
USB1-213ENST00000566292 TMBIM4Q9HC24 238 aa16.13■□□□□ 0.17
USB1-213ENST00000566292 SDR39U1Q9NRG7 319 aaPredicted RBP16.13■□□□□ 0.17
USB1-213ENST00000566292 ASB6Q9NWX5 421 aa16.13■□□□□ 0.17
USB1-213ENST00000566292 CISD1Q9NZ45 108 aaKnown RBP16.13■□□□□ 0.17
USB1-213ENST00000566292 ZIM2Q9NZV7 527 aa16.13■□□□□ 0.17
USB1-213ENST00000566292 P2RX2Q9UBL9 471 aa16.13■□□□□ 0.17
USB1-213ENST00000566292 FLVCR1Q9Y5Y0 555 aa16.13■□□□□ 0.17
USB1-213ENST00000566292 CIB4A0PJX0 185 aa16.12■□□□□ 0.17
USB1-213ENST00000566292 CDHR4A6H8M9 788 aa16.12■□□□□ 0.17
USB1-213ENST00000566292 CCT8L1PA6NM43 557 aa16.12■□□□□ 0.17
USB1-213ENST00000566292 PDLIM1O00151 329 aa16.12■□□□□ 0.17
USB1-213ENST00000566292 BCHEP06276 602 aa16.12■□□□□ 0.17
USB1-213ENST00000566292 ITGA5P08648 1049 aa16.12■□□□□ 0.17
USB1-213ENST00000566292 GKN3PP0CG01 181 aa16.12■□□□□ 0.17
USB1-213ENST00000566292 ZCCHC18P0CG32 403 aa16.12■□□□□ 0.17
USB1-213ENST00000566292 ACAA2P42765 397 aaKnown RBP16.12■□□□□ 0.17
USB1-213ENST00000566292 GSTA3Q16772 222 aa16.12■□□□□ 0.17
USB1-213ENST00000566292 CLEC12BQ2HXU8 276 aa16.12■□□□□ 0.17
USB1-213ENST00000566292 CASP12Q6UXS9 341 aa16.12■□□□□ 0.17
USB1-213ENST00000566292 OR52E4Q8NGH9 312 aa16.12■□□□□ 0.17
USB1-213ENST00000566292 OR52N5Q8NH56 324 aa16.12■□□□□ 0.17
USB1-213ENST00000566292 OR52P1PQ8NH57 321 aa16.12■□□□□ 0.17
USB1-213ENST00000566292 GTPBP3Q969Y2 492 aaKnown RBP16.12■□□□□ 0.17
USB1-213ENST00000566292 AURKBQ96GD4 344 aaPredicted RBP16.12■□□□□ 0.17
USB1-213ENST00000566292 TPT1P8Q9HAU6 139 aa16.12■□□□□ 0.17
USB1-213ENST00000566292 NKIRAS1Q9NYS0 192 aa16.12■□□□□ 0.17
USB1-213ENST00000566292 TAS2R16Q9NYV7 291 aa16.12■□□□□ 0.17
USB1-213ENST00000566292 SLC25A15Q9Y619 301 aa16.12■□□□□ 0.17
USB1-213ENST00000566292 ALPK2Q86TB3 2170 aa16.11■□□□□ 0.17
USB1-213ENST00000566292 A0A1W2PR80 420 aa16.11■□□□□ 0.17
USB1-213ENST00000566292 EIF1BO60739 113 aaKnown RBP16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms