RNA–Protein interactions for RNA: ENST00000566078.1

CTCF-203, Transcript of CCCTC-binding factor, humanhuman

TSL 2

Gene CTCF, Length 1,627 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-203ENST00000566078 CH25HO95992 272 aa27.67■■■□□ 2.02
CTCF-203ENST00000566078 IGF2P01344 180 aa27.67■■■□□ 2.02
CTCF-203ENST00000566078 HK1P19367 917 aa27.67■■■□□ 2.02
CTCF-203ENST00000566078 TMEM236Q5W0B7 351 aa27.67■■■□□ 2.02
CTCF-203ENST00000566078 OR2M7Q8NG81 312 aa27.67■■■□□ 2.02
CTCF-203ENST00000566078 TEX47Q8TBZ9 253 aa27.67■■■□□ 2.02
CTCF-203ENST00000566078 GATA6Q92908 595 aa27.67■■■□□ 2.02
CTCF-203ENST00000566078 KTI12Q96EK9 354 aaPredicted RBP27.67■■■□□ 2.02
CTCF-203ENST00000566078 C5orf34Q96MH7 638 aa27.67■■■□□ 2.02
CTCF-203ENST00000566078 BOKQ9UMX3 212 aaPredicted RBP27.67■■■□□ 2.02
CTCF-203ENST00000566078 CDH10Q9Y6N8 788 aa27.67■■■□□ 2.02
CTCF-203ENST00000566078 ZC3H12DA2A288 527 aaKnown RBP27.67■■■□□ 2.02
CTCF-203ENST00000566078 A8MVM7 634 aa27.67■■■□□ 2.02
CTCF-203ENST00000566078 LRRN3E7EW58 273 aa27.67■■■□□ 2.02
CTCF-203ENST00000566078 OR7A10O76100 309 aa27.67■■■□□ 2.02
CTCF-203ENST00000566078 SP1P08047 785 aa27.67■■■□□ 2.02
CTCF-203ENST00000566078 GGT2P36268 569 aa27.67■■■□□ 2.02
CTCF-203ENST00000566078 SLC46A3Q7Z3Q1 461 aa27.67■■■□□ 2.02
CTCF-203ENST00000566078 C10orf53Q8N6V4 93 aa27.67■■■□□ 2.02
CTCF-203ENST00000566078 OR5M1Q8NGP8 315 aa27.67■■■□□ 2.02
CTCF-203ENST00000566078 APOL4Q9BPW4 351 aa27.67■■■□□ 2.02
CTCF-203ENST00000566078 TBC1D23Q9NUY8 699 aa27.67■■■□□ 2.02
CTCF-203ENST00000566078 LOC400499M0QZD8 3231 aa27.66■■■□□ 2.02
CTCF-203ENST00000566078 HTR3EA5X5Y0 456 aa27.66■■■□□ 2.02
CTCF-203ENST00000566078 NME2P1O60361 137 aa27.66■■■□□ 2.02
CTCF-203ENST00000566078 CD46P15529 392 aa27.66■■■□□ 2.02
CTCF-203ENST00000566078 NME2P22392 152 aa27.66■■■□□ 2.02
CTCF-203ENST00000566078 EIF1P41567 113 aaKnown RBP27.66■■■□□ 2.02
CTCF-203ENST00000566078 FOXK1P85037 733 aa27.66■■■□□ 2.02
CTCF-203ENST00000566078 ZNF74Q16587 644 aa27.66■■■□□ 2.02
CTCF-203ENST00000566078 SLC25A25Q6KCM7 469 aa27.66■■■□□ 2.02
CTCF-203ENST00000566078 SULF2Q8IWU5 870 aa27.66■■■□□ 2.02
CTCF-203ENST00000566078 CLDN22Q8N7P3 220 aa27.66■■■□□ 2.02
CTCF-203ENST00000566078 SETD9Q8NE22 299 aa27.66■■■□□ 2.02
CTCF-203ENST00000566078 OR8D4Q8NGM9 314 aa27.66■■■□□ 2.02
CTCF-203ENST00000566078 ZFP64Q9NPA5 681 aa27.66■■■□□ 2.02
CTCF-203ENST00000566078 RPH3AQ9Y2J0 694 aaPredicted RBP27.66■■■□□ 2.02
CTCF-203ENST00000566078 KLF13Q9Y2Y9 288 aaPredicted RBP27.66■■■□□ 2.02
CTCF-203ENST00000566078 TRAV36DV7A0A075B6V5 113 aa27.65■■■□□ 2.02
CTCF-203ENST00000566078 TRAV27A0A087WT01 109 aa27.65■■■□□ 2.02
CTCF-203ENST00000566078 RPSAP08865 295 aaKnown RBP27.65■■■□□ 2.02
CTCF-203ENST00000566078 RPS5P46782 204 aaKnown RBP27.65■■■□□ 2.02
CTCF-203ENST00000566078 RPS6KA3P51812 740 aa27.65■■■□□ 2.02
CTCF-203ENST00000566078 TOMM20Q15388 145 aa27.65■■■□□ 2.02
CTCF-203ENST00000566078 IGFL2Q6UWQ7 119 aa27.65■■■□□ 2.02
CTCF-203ENST00000566078 OAFQ86UD1 273 aa27.65■■■□□ 2.02
CTCF-203ENST00000566078 CCDC71Q8IV32 467 aaPredicted RBP27.65■■■□□ 2.02
CTCF-203ENST00000566078 IQCF1Q8N6M8 205 aa27.65■■■□□ 2.02
CTCF-203ENST00000566078 FAM81AQ8TBF8 368 aa27.65■■■□□ 2.02
CTCF-203ENST00000566078 STK35Q8TDR2 534 aa27.65■■■□□ 2.02
CTCF-203ENST00000566078 OR11A1Q9GZK7 315 aa27.65■■■□□ 2.02
CTCF-203ENST00000566078 IL11P20809 199 aa27.64■■■□□ 2.02
CTCF-203ENST00000566078 IL5RAQ01344 420 aa27.64■■■□□ 2.02
CTCF-203ENST00000566078 FOXO1Q12778 655 aa27.64■■■□□ 2.02
CTCF-203ENST00000566078 C1orf140Q5VVS0 124 aa27.64■■■□□ 2.02
CTCF-203ENST00000566078 BROXQ5VW32 411 aa27.64■■■□□ 2.02
CTCF-203ENST00000566078 THAP5Q7Z6K1 395 aa27.64■■■□□ 2.02
CTCF-203ENST00000566078 LRRC17Q8N6Y2 441 aa27.64■■■□□ 2.02
CTCF-203ENST00000566078 ATP6V1C2Q8NEY4 427 aa27.64■■■□□ 2.02
CTCF-203ENST00000566078 OSTF1Q92882 214 aa27.64■■■□□ 2.02
CTCF-203ENST00000566078 TAAR8Q969N4 342 aa27.64■■■□□ 2.02
CTCF-203ENST00000566078 DNAJA3Q96EY1 480 aa27.64■■■□□ 2.02
CTCF-203ENST00000566078 OR52D1Q9H346 318 aa27.64■■■□□ 2.02
CTCF-203ENST00000566078 IL20Q9NYY1 176 aa27.64■■■□□ 2.02
CTCF-203ENST00000566078 SIGLEC7Q9Y286 467 aa27.64■■■□□ 2.02
CTCF-203ENST00000566078 KIAA1549Q9HCM3 1950 aa27.64■■■□□ 2.01
CTCF-203ENST00000566078 HCN1O60741 890 aa27.63■■■□□ 2.01
CTCF-203ENST00000566078 NPIPB7O75200 414 aa27.63■■■□□ 2.01
CTCF-203ENST00000566078 RFPL3SP0C7P2 107 aa27.63■■■□□ 2.01
CTCF-203ENST00000566078 ADH6P28332 368 aa27.63■■■□□ 2.01
CTCF-203ENST00000566078 SRD5A2P31213 254 aa27.63■■■□□ 2.01
CTCF-203ENST00000566078 SLC9A3P48764 834 aa27.63■■■□□ 2.01
CTCF-203ENST00000566078 NUP107P57740 925 aa27.63■■■□□ 2.01
CTCF-203ENST00000566078 UGT2A3Q6UWM9 527 aa27.63■■■□□ 2.01
CTCF-203ENST00000566078 C5orf46Q6UWT4 87 aa27.63■■■□□ 2.01
CTCF-203ENST00000566078 GALNTL5Q7Z4T8 443 aa27.63■■■□□ 2.01
CTCF-203ENST00000566078 GTPBP8Q8N3Z3 284 aaPredicted RBP27.63■■■□□ 2.01
CTCF-203ENST00000566078 OR51A7Q8NH64 312 aa27.63■■■□□ 2.01
CTCF-203ENST00000566078 SAMD8Q96LT4 415 aa27.63■■■□□ 2.01
CTCF-203ENST00000566078 MOGAT1Q96PD6 335 aa27.63■■■□□ 2.01
CTCF-203ENST00000566078 SERINC1Q9NRX5 453 aa27.63■■■□□ 2.01
CTCF-203ENST00000566078 ZNF337Q9Y3M9 751 aa27.63■■■□□ 2.01
CTCF-203ENST00000566078 URB1O60287 2271 aaKnown RBP27.63■■■□□ 2.01
CTCF-203ENST00000566078 ZNF208O43345 1280 aa27.63■■■□□ 2.01
CTCF-203ENST00000566078 EFNA2O43921 213 aa27.63■■■□□ 2.01
CTCF-203ENST00000566078 TNFSF10P50591 281 aa27.63■■■□□ 2.01
CTCF-203ENST00000566078 FXYD6P3P58550 94 aa27.63■■■□□ 2.01
CTCF-203ENST00000566078 TLE3Q04726 772 aa27.63■■■□□ 2.01
CTCF-203ENST00000566078 GINS1Q14691 196 aa27.63■■■□□ 2.01
CTCF-203ENST00000566078 ZNF766Q5HY98 468 aa27.63■■■□□ 2.01
CTCF-203ENST00000566078 CLEC12AQ5QGZ9 265 aa27.63■■■□□ 2.01
CTCF-203ENST00000566078 C1QL3Q5VWW1 255 aa27.63■■■□□ 2.01
CTCF-203ENST00000566078 RAET1LQ5VY80 246 aa27.63■■■□□ 2.01
CTCF-203ENST00000566078 SLX4IPQ5VYV7 408 aa27.63■■■□□ 2.01
CTCF-203ENST00000566078 SLC39A7Q92504 469 aa27.63■■■□□ 2.01
CTCF-203ENST00000566078 RELTQ969Z4 430 aa27.63■■■□□ 2.01
CTCF-203ENST00000566078 DDIT4LQ96D03 193 aa27.63■■■□□ 2.01
CTCF-203ENST00000566078 SCMH1Q96GD3 660 aa27.63■■■□□ 2.01
CTCF-203ENST00000566078 NR1H4Q96RI1 486 aaPredicted RBP27.63■■■□□ 2.01
CTCF-203ENST00000566078 PTDSS2Q9BVG9 487 aa27.63■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms