RNA–Protein interactions for RNA: ENST00000565393.2

TCF4-228, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 314 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-228ENST00000565393 VEZF1Q14119 521 aa5.66□□□□□ -1.5
TCF4-228ENST00000565393 RAB35Q15286 201 aa5.66□□□□□ -1.5
TCF4-228ENST00000565393 OR7A5Q15622 319 aa5.66□□□□□ -1.5
TCF4-228ENST00000565393 SLC9B1Q4ZJI4 515 aa5.66□□□□□ -1.5
TCF4-228ENST00000565393 TNFAIP8L3Q5GJ75 292 aa5.66□□□□□ -1.5
TCF4-228ENST00000565393 C6orf10Q5SRN2 563 aa5.66□□□□□ -1.5
TCF4-228ENST00000565393 MRPL2Q5T653 305 aaKnown RBP5.66□□□□□ -1.5
TCF4-228ENST00000565393 AGAP6Q5VW22 663 aa5.66□□□□□ -1.5
TCF4-228ENST00000565393 OR7E24Q6IFN5 339 aa5.66□□□□□ -1.5
TCF4-228ENST00000565393 TMEM108Q6UXF1 575 aa5.66□□□□□ -1.5
TCF4-228ENST00000565393 CASP12Q6UXS9 341 aa5.66□□□□□ -1.5
TCF4-228ENST00000565393 DNAJC14Q6Y2X3 702 aaPredicted RBP5.66□□□□□ -1.5
TCF4-228ENST00000565393 SSX8Q7RTT4 187 aa5.66□□□□□ -1.5
TCF4-228ENST00000565393 AAED1Q7RTV5 226 aa5.66□□□□□ -1.5
TCF4-228ENST00000565393 GPAT4Q86UL3 456 aa5.66□□□□□ -1.5
TCF4-228ENST00000565393 VRK2Q86Y07 508 aa5.66□□□□□ -1.5
TCF4-228ENST00000565393 ZNF440Q8IYI8 595 aa5.66□□□□□ -1.5
TCF4-228ENST00000565393 MAPK1IP1LQ8NDC0 245 aa5.66□□□□□ -1.5
TCF4-228ENST00000565393 KBTBD8Q8NFY9 601 aa5.66□□□□□ -1.5
TCF4-228ENST00000565393 OR52E4Q8NGH9 312 aa5.66□□□□□ -1.5
TCF4-228ENST00000565393 AURKBQ96GD4 344 aaPredicted RBP5.66□□□□□ -1.5
TCF4-228ENST00000565393 ITCHQ96J02 903 aa5.66□□□□□ -1.5
TCF4-228ENST00000565393 RADILQ96JH8 1075 aa5.66□□□□□ -1.5
TCF4-228ENST00000565393 COX4I2Q96KJ9 171 aa5.66□□□□□ -1.5
TCF4-228ENST00000565393 HS6ST2Q96MM7 605 aa5.66□□□□□ -1.5
TCF4-228ENST00000565393 TAPBPLQ9BX59 468 aa5.66□□□□□ -1.5
TCF4-228ENST00000565393 ADAM19Q9H013 955 aa5.66□□□□□ -1.5
TCF4-228ENST00000565393 SLC38A1Q9H2H9 487 aa5.66□□□□□ -1.5
TCF4-228ENST00000565393 FAIMQ9NVQ4 179 aa5.66□□□□□ -1.5
TCF4-228ENST00000565393 TAS2R16Q9NYV7 291 aa5.66□□□□□ -1.5
TCF4-228ENST00000565393 CALML5Q9NZT1 146 aa5.66□□□□□ -1.5
TCF4-228ENST00000565393 P2RX2Q9UBL9 471 aa5.66□□□□□ -1.5
TCF4-228ENST00000565393 MGAT4BQ9UQ53 548 aa5.66□□□□□ -1.5
TCF4-228ENST00000565393 MAGED1Q9Y5V3 778 aaPredicted RBP5.66□□□□□ -1.5
TCF4-228ENST00000565393 ATP23Q9Y6H3 246 aa5.66□□□□□ -1.5
TCF4-228ENST00000565393 APCP25054 2843 aa5.66□□□□□ -1.5
TCF4-228ENST00000565393 ABCA12Q86UK0 2595 aa5.65□□□□□ -1.5
TCF4-228ENST00000565393 PCNX1Q96RV3 2341 aa5.65□□□□□ -1.5
TCF4-228ENST00000565393 PRRC2AP48634 2157 aaKnown RBP5.65□□□□□ -1.5
TCF4-228ENST00000565393 A0A0G2JPF8 293 aa5.65□□□□□ -1.5
TCF4-228ENST00000565393 ZC3H12DA2A288 527 aaKnown RBP5.65□□□□□ -1.5
TCF4-228ENST00000565393 FAM234BA2RU67 622 aa5.65□□□□□ -1.5
TCF4-228ENST00000565393 HNRNPCL2B2RXH8 293 aa5.65□□□□□ -1.5
TCF4-228ENST00000565393 HNRNPCL3B7ZW38 293 aa5.65□□□□□ -1.5
TCF4-228ENST00000565393 C5orf58C9J3I9 102 aa5.65□□□□□ -1.5
TCF4-228ENST00000565393 INAFM1C9JVW0 142 aa5.65□□□□□ -1.5
TCF4-228ENST00000565393 OVOL3O00110 214 aa5.65□□□□□ -1.5
TCF4-228ENST00000565393 KLF11O14901 512 aa5.65□□□□□ -1.5
TCF4-228ENST00000565393 DNPH1O43598 174 aa5.65□□□□□ -1.5
TCF4-228ENST00000565393 SSX4O60224 188 aa5.65□□□□□ -1.5
TCF4-228ENST00000565393 HNRNPCL1O60812 293 aaKnown RBP5.65□□□□□ -1.5
TCF4-228ENST00000565393 ADAM11O75078 769 aa5.65□□□□□ -1.5
TCF4-228ENST00000565393 NDUFS7O75251 213 aa5.65□□□□□ -1.5
TCF4-228ENST00000565393 SNNO75324 88 aaPredicted RBP5.65□□□□□ -1.5
TCF4-228ENST00000565393 AKR7A3O95154 331 aa5.65□□□□□ -1.5
TCF4-228ENST00000565393 GPIP06744 558 aa5.65□□□□□ -1.5
TCF4-228ENST00000565393 TFPTP0C1Z6 253 aa5.65□□□□□ -1.5
TCF4-228ENST00000565393 DANCRP0C864 163 aa5.65□□□□□ -1.5
TCF4-228ENST00000565393 ZCCHC18P0CG32 403 aa5.65□□□□□ -1.5
TCF4-228ENST00000565393 HNRNPCL4P0DMR1 293 aa5.65□□□□□ -1.5
TCF4-228ENST00000565393 PTAFRP25105 342 aa5.65□□□□□ -1.5
TCF4-228ENST00000565393 FABP6P51161 128 aa5.65□□□□□ -1.5
TCF4-228ENST00000565393 CRISP3P54108 245 aa5.65□□□□□ -1.5
TCF4-228ENST00000565393 SLC18A1P54219 525 aa5.65□□□□□ -1.5
TCF4-228ENST00000565393 DSTNP60981 165 aa5.65□□□□□ -1.5
TCF4-228ENST00000565393 H3F3AP84243 136 aa5.65□□□□□ -1.5
TCF4-228ENST00000565393 TGFBR3Q03167 851 aa5.65□□□□□ -1.5
TCF4-228ENST00000565393 EPS8Q12929 822 aa5.65□□□□□ -1.5
TCF4-228ENST00000565393 BNIP2Q12982 314 aa5.65□□□□□ -1.5
TCF4-228ENST00000565393 SLC17A1Q14916 467 aa5.65□□□□□ -1.5
TCF4-228ENST00000565393 LARS2Q15031 903 aaKnown RBP5.65□□□□□ -1.5
TCF4-228ENST00000565393 GABRA6Q16445 453 aa5.65□□□□□ -1.5
TCF4-228ENST00000565393 PGGHGQ32M88 737 aa5.65□□□□□ -1.5
TCF4-228ENST00000565393 LIN52Q52LA3 116 aa5.65□□□□□ -1.5
TCF4-228ENST00000565393 PDCD4Q53EL6 469 aaKnown RBP5.65□□□□□ -1.5
TCF4-228ENST00000565393 ZNF311Q5JNZ3 666 aa5.65□□□□□ -1.5
TCF4-228ENST00000565393 OTUD3Q5T2D3 398 aaPredicted RBP5.65□□□□□ -1.5
TCF4-228ENST00000565393 TSPO2Q5TGU0 170 aa5.65□□□□□ -1.5
TCF4-228ENST00000565393 WBP2NLQ6ICG8 309 aa5.65□□□□□ -1.5
TCF4-228ENST00000565393 FBXL14Q8N1E6 418 aa5.65□□□□□ -1.5
TCF4-228ENST00000565393 MIER2Q8N344 545 aa5.65□□□□□ -1.5
TCF4-228ENST00000565393 CLIP4Q8N3C7 705 aa5.65□□□□□ -1.5
TCF4-228ENST00000565393 TMEM99Q8N816 258 aa5.65□□□□□ -1.5
TCF4-228ENST00000565393 FAM71CQ8NEG0 241 aa5.65□□□□□ -1.5
TCF4-228ENST00000565393 RNF217Q8TC41 542 aa5.65□□□□□ -1.5
TCF4-228ENST00000565393 SLC38A5Q8WUX1 472 aa5.65□□□□□ -1.5
TCF4-228ENST00000565393 IGFBPL1Q8WX77 278 aa5.65□□□□□ -1.5
TCF4-228ENST00000565393 VPS33AQ96AX1 596 aa5.65□□□□□ -1.5
TCF4-228ENST00000565393 SLC25A36Q96CQ1 311 aa5.65□□□□□ -1.5
TCF4-228ENST00000565393 ADAD1Q96M93 576 aaKnown RBP5.65□□□□□ -1.5
TCF4-228ENST00000565393 MUS81Q96NY9 551 aa5.65□□□□□ -1.5
TCF4-228ENST00000565393 RHNO1Q9BSD3 238 aa5.65□□□□□ -1.5
TCF4-228ENST00000565393 REG4Q9BYZ8 158 aa5.65□□□□□ -1.5
TCF4-228ENST00000565393 TRIM2Q9C040 744 aa5.65□□□□□ -1.5
TCF4-228ENST00000565393 TPT1P8Q9HAU6 139 aa5.65□□□□□ -1.5
TCF4-228ENST00000565393 BARX1Q9HBU1 254 aaPredicted RBP5.65□□□□□ -1.5
TCF4-228ENST00000565393 TMBIM4Q9HC24 238 aa5.65□□□□□ -1.5
TCF4-228ENST00000565393 YAE1D1Q9NRH1 226 aa5.65□□□□□ -1.5
TCF4-228ENST00000565393 SLC7A10Q9NS82 523 aa5.65□□□□□ -1.5
TCF4-228ENST00000565393 SLC6A13Q9NSD5 602 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms