RNA–Protein interactions for RNA: ENST00000565324.5

SMG1-211, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 12,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-211ENST00000565324 RAC1P63000 192 aa4.78□□□□□ -1.64
SMG1-211ENST00000565324 NOGQ13253 232 aa4.78□□□□□ -1.64
SMG1-211ENST00000565324 TMEM183BQ1AE95 376 aa4.78□□□□□ -1.64
SMG1-211ENST00000565324 MSS51Q4VC12 460 aa4.78□□□□□ -1.64
SMG1-211ENST00000565324 RNF113BQ8IZP6 322 aaKnown RBP4.78□□□□□ -1.64
SMG1-211ENST00000565324 ARHGDIGQ99819 225 aa4.78□□□□□ -1.64
SMG1-211ENST00000565324 NDFIP1Q9BT67 221 aa4.78□□□□□ -1.64
SMG1-211ENST00000565324 CRLF2Q9HC73 371 aa4.78□□□□□ -1.64
SMG1-211ENST00000565324 SDR39U1Q9NRG7 319 aaPredicted RBP4.78□□□□□ -1.64
SMG1-211ENST00000565324 CYB5R1Q9UHQ9 305 aa4.78□□□□□ -1.64
SMG1-211ENST00000565324 BTNL2Q9UIR0 455 aa4.78□□□□□ -1.64
SMG1-211ENST00000565324 RHBDD3Q9Y3P4 386 aa4.78□□□□□ -1.64
SMG1-211ENST00000565324 UBR2Q8IWV8 1755 aa4.78□□□□□ -1.64
SMG1-211ENST00000565324 KIDINS220Q9ULH0 1771 aa4.78□□□□□ -1.64
SMG1-211ENST00000565324 USF1P22415 310 aaPredicted RBP4.78□□□□□ -1.64
SMG1-211ENST00000565324 AADACP22760 399 aa4.78□□□□□ -1.64
SMG1-211ENST00000565324 OPRD1P41143 372 aa4.78□□□□□ -1.64
SMG1-211ENST00000565324 RNF144AP50876 292 aaPredicted RBP4.78□□□□□ -1.64
SMG1-211ENST00000565324 SORDQ00796 357 aa4.78□□□□□ -1.64
SMG1-211ENST00000565324 FAM110CQ1W6H9 321 aa4.78□□□□□ -1.64
SMG1-211ENST00000565324 TREML2Q5T2D2 321 aa4.78□□□□□ -1.64
SMG1-211ENST00000565324 NADSYN1Q6IA69 706 aa4.78□□□□□ -1.64
SMG1-211ENST00000565324 UQCC3Q6UW78 93 aa4.78□□□□□ -1.64
SMG1-211ENST00000565324 FJX1Q86VR8 437 aa4.78□□□□□ -1.64
SMG1-211ENST00000565324 OR1J2Q8NGS2 313 aa4.78□□□□□ -1.64
SMG1-211ENST00000565324 OR8U1Q8NH10 309 aa4.78□□□□□ -1.64
SMG1-211ENST00000565324 CDS1Q92903 461 aa4.78□□□□□ -1.64
SMG1-211ENST00000565324 C4orf36Q96KX1 117 aa4.78□□□□□ -1.64
SMG1-211ENST00000565324 GPR52Q9Y2T5 361 aa4.78□□□□□ -1.64
SMG1-211ENST00000565324 STYXL1Q9Y6J8 313 aa4.78□□□□□ -1.64
SMG1-211ENST00000565324 SFTPDP35247 375 aa4.78□□□□□ -1.64
SMG1-211ENST00000565324 PTTG1IPP53801 180 aa4.78□□□□□ -1.64
SMG1-211ENST00000565324 AAK1Q2M2I8 961 aa4.78□□□□□ -1.64
SMG1-211ENST00000565324 GTDC1Q4AE62 458 aa4.78□□□□□ -1.64
SMG1-211ENST00000565324 SYPL2Q5VXT5 272 aa4.78□□□□□ -1.64
SMG1-211ENST00000565324 PLCXD3Q63HM9 321 aa4.78□□□□□ -1.64
SMG1-211ENST00000565324 FBRSQ9HAH7 460 aa4.78□□□□□ -1.64
SMG1-211ENST00000565324 SCPEP1Q9HB40 452 aa4.78□□□□□ -1.64
SMG1-211ENST00000565324 ZNF891A8MT65 544 aaPredicted RBP4.77□□□□□ -1.65
SMG1-211ENST00000565324 TRAPPC2LH3BP13 241 aa4.77□□□□□ -1.65
SMG1-211ENST00000565324 SULT1C4O75897 302 aa4.77□□□□□ -1.65
SMG1-211ENST00000565324 VNN1O95497 513 aa4.77□□□□□ -1.65
SMG1-211ENST00000565324 CD63P08962 238 aa4.77□□□□□ -1.65
SMG1-211ENST00000565324 NAGAP17050 411 aa4.77□□□□□ -1.65
SMG1-211ENST00000565324 CBLP22681 906 aa4.77□□□□□ -1.65
SMG1-211ENST00000565324 IL2RGP31785 369 aa4.77□□□□□ -1.65
SMG1-211ENST00000565324 BAXQ07812 192 aa4.77□□□□□ -1.65
SMG1-211ENST00000565324 ZNF154Q13106 437 aa4.77□□□□□ -1.65
SMG1-211ENST00000565324 C5orf46Q6UWT4 87 aa4.77□□□□□ -1.65
SMG1-211ENST00000565324 LAX1Q8IWV1 398 aa4.77□□□□□ -1.65
SMG1-211ENST00000565324 SAMD8Q96LT4 415 aa4.77□□□□□ -1.65
SMG1-211ENST00000565324 CRB3Q9BUF7 120 aa4.77□□□□□ -1.65
SMG1-211ENST00000565324 SLC25A32Q9H2D1 315 aa4.77□□□□□ -1.65
SMG1-211ENST00000565324 PELI2Q9HAT8 420 aa4.77□□□□□ -1.65
SMG1-211ENST00000565324 C1GALT1Q9NS00 363 aa4.77□□□□□ -1.65
SMG1-211ENST00000565324 SLC2A6Q9UGQ3 507 aa4.77□□□□□ -1.65
SMG1-211ENST00000565324 HS3ST4Q9Y661 456 aa4.77□□□□□ -1.65
SMG1-211ENST00000565324 COL3A1P02461 1466 aaPredicted RBP4.77□□□□□ -1.65
SMG1-211ENST00000565324 TMEM235A6NFC5 223 aa4.77□□□□□ -1.65
SMG1-211ENST00000565324 ZNF207O43670 478 aaKnown RBP4.77□□□□□ -1.65
SMG1-211ENST00000565324 HOXB5P09067 269 aa4.77□□□□□ -1.65
SMG1-211ENST00000565324 SLC14A2Q15849 920 aa4.77□□□□□ -1.65
SMG1-211ENST00000565324 SLC10A6Q3KNW5 377 aa4.77□□□□□ -1.65
SMG1-211ENST00000565324 IL20RBQ6UXL0 311 aa4.77□□□□□ -1.65
SMG1-211ENST00000565324 SLC46A3Q7Z3Q1 461 aa4.77□□□□□ -1.65
SMG1-211ENST00000565324 KREMEN2Q8NCW0 462 aa4.77□□□□□ -1.65
SMG1-211ENST00000565324 SCAMP5Q8TAC9 235 aa4.77□□□□□ -1.65
SMG1-211ENST00000565324 GAB3Q8WWW8 586 aa4.77□□□□□ -1.65
SMG1-211ENST00000565324 C1QTNF2Q9BXJ5 285 aa4.77□□□□□ -1.65
SMG1-211ENST00000565324 C20orf85Q9H1P6 137 aa4.77□□□□□ -1.65
SMG1-211ENST00000565324 C1orf198Q9H425 327 aa4.77□□□□□ -1.65
SMG1-211ENST00000565324 KCNK13Q9HB14 408 aa4.77□□□□□ -1.65
SMG1-211ENST00000565324 SIX2Q9NPC8 291 aa4.77□□□□□ -1.65
SMG1-211ENST00000565324 SCN4AP35499 1836 aa4.77□□□□□ -1.65
SMG1-211ENST00000565324 ZIC2O95409 532 aaPredicted RBP4.77□□□□□ -1.65
SMG1-211ENST00000565324 PAX6P26367 422 aa4.77□□□□□ -1.65
SMG1-211ENST00000565324 IL3RAP26951 378 aa4.77□□□□□ -1.65
SMG1-211ENST00000565324 GSK3AP49840 483 aa4.77□□□□□ -1.65
SMG1-211ENST00000565324 GRB2P62993 217 aaKnown RBP4.77□□□□□ -1.65
SMG1-211ENST00000565324 ARHGAP11BQ3KRB8 267 aa4.77□□□□□ -1.65
SMG1-211ENST00000565324 C3orf38Q5JPI3 329 aa4.77□□□□□ -1.65
SMG1-211ENST00000565324 AADACL3Q5VUY0 350 aa4.77□□□□□ -1.65
SMG1-211ENST00000565324 PRSS35Q8N3Z0 413 aa4.77□□□□□ -1.65
SMG1-211ENST00000565324 BPIFB2Q8N4F0 458 aa4.77□□□□□ -1.65
SMG1-211ENST00000565324 SLAIN1Q8ND83 568 aa4.77□□□□□ -1.65
SMG1-211ENST00000565324 OR13C2Q8NGS9 318 aa4.77□□□□□ -1.65
SMG1-211ENST00000565324 CPNE4Q96A23 557 aaPredicted RBP4.77□□□□□ -1.65
SMG1-211ENST00000565324 KIRREL1Q96J84 757 aa4.77□□□□□ -1.65
SMG1-211ENST00000565324 OR7D2Q96RA2 312 aa4.77□□□□□ -1.65
SMG1-211ENST00000565324 SMIM3Q9BZL3 60 aa4.77□□□□□ -1.65
SMG1-211ENST00000565324 HRASLSQ9HDD0 168 aa4.77□□□□□ -1.65
SMG1-211ENST00000565324 PEAK1Q9H792 1746 aa4.77□□□□□ -1.65
SMG1-211ENST00000565324 ARID1AO14497 2285 aa4.77□□□□□ -1.65
SMG1-211ENST00000565324 H7BYZ3 331 aa4.77□□□□□ -1.65
SMG1-211ENST00000565324 JMJD7P0C870 316 aa4.77□□□□□ -1.65
SMG1-211ENST00000565324 TAL1P17542 331 aaPredicted RBP4.77□□□□□ -1.65
SMG1-211ENST00000565324 TACR1P25103 407 aa4.77□□□□□ -1.65
SMG1-211ENST00000565324 CCKARP32238 428 aa4.77□□□□□ -1.65
SMG1-211ENST00000565324 SEC13P55735 322 aa4.77□□□□□ -1.65
SMG1-211ENST00000565324 ZNF239Q16600 458 aaKnown RBP4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms