RNA–Protein interactions for RNA: ENST00000564343.5

TCF4-223, Transcript of transcription factor 4, human

TSL 4

Gene TCF4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF4-223	ENST00000564343	SH2D4B	Q5SQS7	431 aa		4.57	□□□□□ -1.68
TCF4-223	ENST00000564343	NCMAP	Q5T1S8	102 aa		4.57	□□□□□ -1.68
TCF4-223	ENST00000564343	TTC19	Q6DKK2	380 aa	Predicted RBP	4.57	□□□□□ -1.68
TCF4-223	ENST00000564343	MFSD12	Q6NUT3	480 aa		4.57	□□□□□ -1.68
TCF4-223	ENST00000564343	ANKRD16	Q6P6B7	361 aa		4.57	□□□□□ -1.68
TCF4-223	ENST00000564343	APOOL	Q6UXV4	268 aa		4.57	□□□□□ -1.68
TCF4-223	ENST00000564343	CYS1	Q717R9	158 aa		4.57	□□□□□ -1.68
TCF4-223	ENST00000564343	PAGE2	Q7Z2X7	111 aa		4.57	□□□□□ -1.68
TCF4-223	ENST00000564343	MARCH3	Q86UD3	253 aa		4.57	□□□□□ -1.68
TCF4-223	ENST00000564343	C1orf52	Q8N6N3	182 aa	Known RBP	4.57	□□□□□ -1.68
TCF4-223	ENST00000564343	GBP7	Q8N8V2	638 aa	Predicted RBP	4.57	□□□□□ -1.68
TCF4-223	ENST00000564343		Q8N9P0	234 aa	Predicted RBP	4.57	□□□□□ -1.68
TCF4-223	ENST00000564343	KBTBD8	Q8NFY9	601 aa		4.57	□□□□□ -1.68
TCF4-223	ENST00000564343	OR7G2	Q8NG99	324 aa		4.57	□□□□□ -1.68
TCF4-223	ENST00000564343	OR4F6	Q8NGB9	312 aa		4.57	□□□□□ -1.68
TCF4-223	ENST00000564343	OR6K3	Q8NGY3	331 aa		4.57	□□□□□ -1.68
TCF4-223	ENST00000564343	ZNF675	Q8TD23	568 aa		4.57	□□□□□ -1.68
TCF4-223	ENST00000564343	DUSP19	Q8WTR2	217 aa		4.57	□□□□□ -1.68
TCF4-223	ENST00000564343	SMAP2	Q8WU79	429 aa	Predicted RBP	4.57	□□□□□ -1.68
TCF4-223	ENST00000564343	ATP6V1E2	Q96A05	226 aa		4.57	□□□□□ -1.68
TCF4-223	ENST00000564343	S100PBP	Q96BU1	408 aa		4.57	□□□□□ -1.68
TCF4-223	ENST00000564343	PHF21B	Q96EK2	531 aa		4.57	□□□□□ -1.68
TCF4-223	ENST00000564343	GMPPA	Q96IJ6	420 aa	Predicted RBP	4.57	□□□□□ -1.68
TCF4-223	ENST00000564343	SNX22	Q96L94	193 aa		4.57	□□□□□ -1.68
TCF4-223	ENST00000564343	GPR78	Q96P69	363 aa		4.57	□□□□□ -1.68
TCF4-223	ENST00000564343	HBEGF	Q99075	208 aa		4.57	□□□□□ -1.68
TCF4-223	ENST00000564343	NTMT1	Q9BV86	223 aa		4.57	□□□□□ -1.68
TCF4-223	ENST00000564343	C19orf24	Q9BVV8	132 aa		4.57	□□□□□ -1.68
TCF4-223	ENST00000564343	STMN4	Q9H169	189 aa	Predicted RBP	4.57	□□□□□ -1.68
TCF4-223	ENST00000564343	FOLH1B	Q9HBA9	442 aa		4.57	□□□□□ -1.68
TCF4-223	ENST00000564343	AHSP	Q9NZD4	102 aa		4.57	□□□□□ -1.68
TCF4-223	ENST00000564343	CPSF2	Q9P2I0	782 aa	Known RBP	4.57	□□□□□ -1.68
TCF4-223	ENST00000564343	ZNF69	Q9UC07	566 aa		4.57	□□□□□ -1.68
TCF4-223	ENST00000564343	UTS2R	Q9UKP6	389 aa		4.57	□□□□□ -1.68
TCF4-223	ENST00000564343	SLC12A4	Q9UP95	1085 aa		4.57	□□□□□ -1.68
TCF4-223	ENST00000564343	RNF115	Q9Y4L5	304 aa		4.57	□□□□□ -1.68
TCF4-223	ENST00000564343	ZNF780B	Q9Y6R6	833 aa		4.57	□□□□□ -1.68
TCF4-223	ENST00000564343	NUP214	P35658	2090 aa	Predicted RBP	4.57	□□□□□ -1.68
TCF4-223	ENST00000564343	UQCRHL	A0A096LP55	91 aa		4.56	□□□□□ -1.68
TCF4-223	ENST00000564343		A0A1W2PP18	115 aa		4.56	□□□□□ -1.68
TCF4-223	ENST00000564343	FAM234B	A2RU67	622 aa		4.56	□□□□□ -1.68
TCF4-223	ENST00000564343	DPRX	A6NFQ7	191 aa		4.56	□□□□□ -1.68
TCF4-223	ENST00000564343	TNFSF11	O14788	317 aa		4.56	□□□□□ -1.68
TCF4-223	ENST00000564343	CXCL13	O43927	109 aa		4.56	□□□□□ -1.68
TCF4-223	ENST00000564343	SSX4	O60224	188 aa		4.56	□□□□□ -1.68
TCF4-223	ENST00000564343	RAMP1	O60894	148 aa		4.56	□□□□□ -1.68
TCF4-223	ENST00000564343	GUCY1B2	O75343	617 aa		4.56	□□□□□ -1.68
TCF4-223	ENST00000564343	BCAS2	O75934	225 aa	Predicted RBP	4.56	□□□□□ -1.68
TCF4-223	ENST00000564343	KLHL2	O95198	593 aa		4.56	□□□□□ -1.68
TCF4-223	ENST00000564343	PLG	P00747	810 aa	Predicted RBP	4.56	□□□□□ -1.68
TCF4-223	ENST00000564343	MT-ND5	P03915	603 aa		4.56	□□□□□ -1.68
TCF4-223	ENST00000564343	ALDOA	P04075	364 aa	Known RBP	4.56	□□□□□ -1.68
TCF4-223	ENST00000564343	IL3	P08700	152 aa		4.56	□□□□□ -1.68
TCF4-223	ENST00000564343	FCGR2A	P12318	317 aa		4.56	□□□□□ -1.68
TCF4-223	ENST00000564343	CHN1	P15882	459 aa		4.56	□□□□□ -1.68
TCF4-223	ENST00000564343	TSPAN8	P19075	237 aa		4.56	□□□□□ -1.68
TCF4-223	ENST00000564343	CRABP2	P29373	138 aa		4.56	□□□□□ -1.68
TCF4-223	ENST00000564343	AGTR1	P30556	359 aa		4.56	□□□□□ -1.68
TCF4-223	ENST00000564343	CTBP2	P56545	445 aa		4.56	□□□□□ -1.68
TCF4-223	ENST00000564343	RPS3A	P61247	264 aa	Known RBP	4.56	□□□□□ -1.68
TCF4-223	ENST00000564343	RAE1	P78406	368 aa	Known RBP	4.56	□□□□□ -1.68
TCF4-223	ENST00000564343	BSPH1	Q075Z2	132 aa		4.56	□□□□□ -1.68
TCF4-223	ENST00000564343	IFT88	Q13099	833 aa		4.56	□□□□□ -1.68
TCF4-223	ENST00000564343	RAB32	Q13637	225 aa		4.56	□□□□□ -1.68
TCF4-223	ENST00000564343	GANAB	Q14697	944 aa	Known RBP	4.56	□□□□□ -1.68
TCF4-223	ENST00000564343	TAB1	Q15750	504 aa		4.56	□□□□□ -1.68
TCF4-223	ENST00000564343	FAM83E	Q2M2I3	478 aa		4.56	□□□□□ -1.68
TCF4-223	ENST00000564343	TMEM249	Q2WGJ8	235 aa		4.56	□□□□□ -1.68
TCF4-223	ENST00000564343	ZNF672	Q499Z4	452 aa	Predicted RBP	4.56	□□□□□ -1.68
TCF4-223	ENST00000564343	GGTA1P	Q4G0N0	100 aa		4.56	□□□□□ -1.68
TCF4-223	ENST00000564343	TECRL	Q5HYJ1	363 aa		4.56	□□□□□ -1.68
TCF4-223	ENST00000564343	TCHHL1	Q5QJ38	904 aa	Predicted RBP	4.56	□□□□□ -1.68
TCF4-223	ENST00000564343	LCE1A	Q5T7P2	110 aa		4.56	□□□□□ -1.68
TCF4-223	ENST00000564343	LGSN	Q5TDP6	509 aa		4.56	□□□□□ -1.68
TCF4-223	ENST00000564343	SFRP4	Q6FHJ7	346 aa	Predicted RBP	4.56	□□□□□ -1.68
TCF4-223	ENST00000564343	NUFIP2	Q7Z417	695 aa	Known RBP	4.56	□□□□□ -1.68
TCF4-223	ENST00000564343	GALNT10	Q86SR1	603 aa		4.56	□□□□□ -1.68
TCF4-223	ENST00000564343	GABRG1	Q8N1C3	465 aa		4.56	□□□□□ -1.68
TCF4-223	ENST00000564343	ZNF619	Q8N2I2	560 aa		4.56	□□□□□ -1.68
TCF4-223	ENST00000564343	ARIH2OS	Q8N7S6	290 aa		4.56	□□□□□ -1.68
TCF4-223	ENST00000564343	PTGR2	Q8N8N7	351 aa	Predicted RBP	4.56	□□□□□ -1.68
TCF4-223	ENST00000564343	OR10D3	Q8NH80	312 aa		4.56	□□□□□ -1.68
TCF4-223	ENST00000564343	HTRA1	Q92743	480 aa		4.56	□□□□□ -1.68
TCF4-223	ENST00000564343	ZNF566	Q969W8	418 aa		4.56	□□□□□ -1.68
TCF4-223	ENST00000564343	EXOSC8	Q96B26	276 aa	Known RBP	4.56	□□□□□ -1.68
TCF4-223	ENST00000564343	MTBP	Q96DY7	904 aa		4.56	□□□□□ -1.68
TCF4-223	ENST00000564343	DTNBP1	Q96EV8	351 aa		4.56	□□□□□ -1.68
TCF4-223	ENST00000564343	C11orf24	Q96F05	449 aa	Predicted RBP	4.56	□□□□□ -1.68
TCF4-223	ENST00000564343	ADGRG7	Q96K78	797 aa		4.56	□□□□□ -1.68
TCF4-223	ENST00000564343	KLHDC3	Q9BQ90	382 aa		4.56	□□□□□ -1.68
TCF4-223	ENST00000564343	TRAF4	Q9BUZ4	470 aa	Predicted RBP	4.56	□□□□□ -1.68
TCF4-223	ENST00000564343	PRRG4	Q9BZD6	226 aa		4.56	□□□□□ -1.68
TCF4-223	ENST00000564343	TRIM2	Q9C040	744 aa		4.56	□□□□□ -1.68
TCF4-223	ENST00000564343	OR10A4	Q9H209	315 aa		4.56	□□□□□ -1.68
TCF4-223	ENST00000564343	DPH5	Q9H2P9	285 aa		4.56	□□□□□ -1.68
TCF4-223	ENST00000564343	PTGES2	Q9H7Z7	377 aa		4.56	□□□□□ -1.68
TCF4-223	ENST00000564343	BRF2	Q9HAW0	419 aa		4.56	□□□□□ -1.68
TCF4-223	ENST00000564343	PFDN4	Q9NQP4	134 aa		4.56	□□□□□ -1.68
TCF4-223	ENST00000564343	TAS2R9	Q9NYW1	312 aa		4.56	□□□□□ -1.68
TCF4-223	ENST00000564343	RNF14	Q9UBS8	474 aa		4.56	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms