RNA–Protein interactions for RNA: ENST00000564068.1

COMMD4-209, Transcript of COMM domain containing 4, humanhuman

Gene COMMD4, Length 4,204 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-209ENST00000564068 PTCHD1Q96NR3 888 aa11.72□□□□□ -0.53
COMMD4-209ENST00000564068 KATNBL1Q9H079 304 aa11.72□□□□□ -0.53
COMMD4-209ENST00000564068 PELI2Q9HAT8 420 aa11.72□□□□□ -0.53
COMMD4-209ENST00000564068 NRIP3Q9NQ35 241 aa11.72□□□□□ -0.53
COMMD4-209ENST00000564068 PNO1Q9NRX1 252 aaKnown RBP11.72□□□□□ -0.53
COMMD4-209ENST00000564068 ZNF443Q9Y2A4 671 aaPredicted RBP11.72□□□□□ -0.53
COMMD4-209ENST00000564068 PCM1Q15154 2024 aa11.72□□□□□ -0.53
COMMD4-209ENST00000564068 CARNS1A5YM72 827 aa11.72□□□□□ -0.53
COMMD4-209ENST00000564068 A8MVJ9 347 aa11.72□□□□□ -0.53
COMMD4-209ENST00000564068 TGM6O95932 706 aa11.72□□□□□ -0.53
COMMD4-209ENST00000564068 IGLV3-27P01718 113 aa11.72□□□□□ -0.53
COMMD4-209ENST00000564068 TYRP1P17643 537 aa11.72□□□□□ -0.53
COMMD4-209ENST00000564068 MAKP20794 623 aa11.72□□□□□ -0.53
COMMD4-209ENST00000564068 FPR3P25089 353 aa11.72□□□□□ -0.53
COMMD4-209ENST00000564068 IL12BP29460 328 aa11.72□□□□□ -0.53
COMMD4-209ENST00000564068 B4GALNT1Q00973 533 aa11.72□□□□□ -0.53
COMMD4-209ENST00000564068 FXNQ16595 210 aa11.72□□□□□ -0.53
COMMD4-209ENST00000564068 PARS2Q7L3T8 475 aaKnown RBP11.72□□□□□ -0.53
COMMD4-209ENST00000564068 GPR148Q8TDV2 347 aa11.72□□□□□ -0.53
COMMD4-209ENST00000564068 LRIG1Q96JA1 1093 aa11.72□□□□□ -0.53
COMMD4-209ENST00000564068 TBL1XR1Q9BZK7 514 aa11.72□□□□□ -0.53
COMMD4-209ENST00000564068 SEMA4CQ9C0C4 833 aa11.72□□□□□ -0.53
COMMD4-209ENST00000564068 ATXN7L1Q9ULK2 861 aaPredicted RBP11.72□□□□□ -0.53
COMMD4-209ENST00000564068 LY75O60449 1722 aa11.72□□□□□ -0.53
COMMD4-209ENST00000564068 SGK494L7N484 410 aa11.72□□□□□ -0.53
COMMD4-209ENST00000564068 SCDO00767 359 aa11.72□□□□□ -0.53
COMMD4-209ENST00000564068 PPM1BO75688 479 aa11.72□□□□□ -0.53
COMMD4-209ENST00000564068 AIFM1O95831 613 aa11.72□□□□□ -0.53
COMMD4-209ENST00000564068 IGHA2P01877 340 aa11.72□□□□□ -0.53
COMMD4-209ENST00000564068 LIMS3P0CW19 117 aa11.72□□□□□ -0.53
COMMD4-209ENST00000564068 LIMS4P0CW20 117 aa11.72□□□□□ -0.53
COMMD4-209ENST00000564068 CBR1P16152 277 aa11.72□□□□□ -0.53
COMMD4-209ENST00000564068 RGS19P49795 217 aa11.72□□□□□ -0.53
COMMD4-209ENST00000564068 SLC39A5Q6ZMH5 540 aa11.72□□□□□ -0.53
COMMD4-209ENST00000564068 NDUFAF7Q7L592 441 aa11.72□□□□□ -0.53
COMMD4-209ENST00000564068 NAXEQ8NCW5 288 aa11.72□□□□□ -0.53
COMMD4-209ENST00000564068 GAL3ST3Q96A11 431 aa11.72□□□□□ -0.53
COMMD4-209ENST00000564068 DGAT2Q96PD7 388 aa11.72□□□□□ -0.53
COMMD4-209ENST00000564068 MS4A8Q9BY19 250 aa11.72□□□□□ -0.53
COMMD4-209ENST00000564068 FN3KQ9H479 309 aa11.72□□□□□ -0.53
COMMD4-209ENST00000564068 INPP5EQ9NRR6 644 aa11.72□□□□□ -0.53
COMMD4-209ENST00000564068 KLK11Q9UBX7 282 aa11.72□□□□□ -0.53
COMMD4-209ENST00000564068 EPHA6Q9UF33 1036 aa11.72□□□□□ -0.53
COMMD4-209ENST00000564068 RAB40ALP0C0E4 278 aa11.71□□□□□ -0.53
COMMD4-209ENST00000564068 CBX5P45973 191 aa11.71□□□□□ -0.53
COMMD4-209ENST00000564068 SHC2P98077 582 aa11.71□□□□□ -0.53
COMMD4-209ENST00000564068 EXOSC7Q15024 291 aaKnown RBP11.71□□□□□ -0.53
COMMD4-209ENST00000564068 TOMM20Q15388 145 aa11.71□□□□□ -0.53
COMMD4-209ENST00000564068 GXYLT1Q4G148 440 aa11.71□□□□□ -0.53
COMMD4-209ENST00000564068 KCTD18Q6PI47 426 aaPredicted RBP11.71□□□□□ -0.53
COMMD4-209ENST00000564068 CHRDL2Q6WN34 429 aa11.71□□□□□ -0.53
COMMD4-209ENST00000564068 OR1J4Q8NGS1 313 aa11.71□□□□□ -0.53
COMMD4-209ENST00000564068 RAB40AQ8WXH6 277 aa11.71□□□□□ -0.53
COMMD4-209ENST00000564068 FAM46BQ96A09 425 aa11.71□□□□□ -0.53
COMMD4-209ENST00000564068 PHB2Q99623 299 aa11.71□□□□□ -0.53
COMMD4-209ENST00000564068 MICU1Q9BPX6 476 aa11.71□□□□□ -0.53
COMMD4-209ENST00000564068 ZNF334Q9HCZ1 680 aaPredicted RBP11.71□□□□□ -0.53
COMMD4-209ENST00000564068 SLC6A20Q9NP91 592 aa11.71□□□□□ -0.53
COMMD4-209ENST00000564068 B3GAT2Q9NPZ5 323 aa11.71□□□□□ -0.53
COMMD4-209ENST00000564068 CYSLTR2Q9NS75 346 aa11.71□□□□□ -0.53
COMMD4-209ENST00000564068 NEU3Q9UQ49 428 aa11.71□□□□□ -0.53
COMMD4-209ENST00000564068 ATG4BQ9Y4P1 393 aa11.71□□□□□ -0.53
COMMD4-209ENST00000564068 HEBP2Q9Y5Z4 205 aa11.71□□□□□ -0.53
COMMD4-209ENST00000564068 TMEM14AQ9Y6G1 99 aa11.71□□□□□ -0.53
COMMD4-209ENST00000564068 TMEM72A0PK05 275 aa11.71□□□□□ -0.53
COMMD4-209ENST00000564068 ZNF593O00488 134 aaPredicted RBP11.71□□□□□ -0.53
COMMD4-209ENST00000564068 FZD6O60353 706 aa11.71□□□□□ -0.53
COMMD4-209ENST00000564068 FCMRO60667 390 aa11.71□□□□□ -0.53
COMMD4-209ENST00000564068 HCKP08631 526 aa11.71□□□□□ -0.53
COMMD4-209ENST00000564068 SBK2P0C263 348 aa11.71□□□□□ -0.53
COMMD4-209ENST00000564068 PTHLHP12272 177 aa11.71□□□□□ -0.53
COMMD4-209ENST00000564068 GPR143P51810 404 aa11.71□□□□□ -0.53
COMMD4-209ENST00000564068 MVDP53602 400 aa11.71□□□□□ -0.53
COMMD4-209ENST00000564068 ALG11Q2TAA5 492 aa11.71□□□□□ -0.53
COMMD4-209ENST00000564068 RPL22L1Q6P5R6 122 aaKnown RBP11.71□□□□□ -0.53
COMMD4-209ENST00000564068 NUP54Q7Z3B4 507 aa11.71□□□□□ -0.53
COMMD4-209ENST00000564068 METTL27Q8N6F8 245 aaPredicted RBP11.71□□□□□ -0.53
COMMD4-209ENST00000564068 ZNF281Q9Y2X9 895 aa11.71□□□□□ -0.53
COMMD4-209ENST00000564068 RBM7Q9Y580 266 aaKnown RBP11.71□□□□□ -0.53
COMMD4-209ENST00000564068 D6RAR5 112 aa11.71□□□□□ -0.54
COMMD4-209ENST00000564068 TMPRSS11DO60235 418 aa11.71□□□□□ -0.54
COMMD4-209ENST00000564068 ADAMTS4O75173 837 aa11.71□□□□□ -0.54
COMMD4-209ENST00000564068 CLEC3AO75596 197 aa11.71□□□□□ -0.54
COMMD4-209ENST00000564068 FGF18O76093 207 aa11.71□□□□□ -0.54
COMMD4-209ENST00000564068 EGFP01133 1207 aa11.71□□□□□ -0.54
COMMD4-209ENST00000564068 RBMXP38159 391 aaKnown RBP11.71□□□□□ -0.54
COMMD4-209ENST00000564068 PDX1P52945 283 aa11.71□□□□□ -0.54
COMMD4-209ENST00000564068 ST3GAL2Q16842 350 aa11.71□□□□□ -0.54
COMMD4-209ENST00000564068 ZNF628Q5EBL2 1059 aa11.71□□□□□ -0.54
COMMD4-209ENST00000564068 C12orf73Q69YU5 71 aa11.71□□□□□ -0.54
COMMD4-209ENST00000564068 CNKSR3Q6P9H4 555 aa11.71□□□□□ -0.54
COMMD4-209ENST00000564068 OR4C15Q8NGM1 316 aa11.71□□□□□ -0.54
COMMD4-209ENST00000564068 DTD2Q96FN9 168 aa11.71□□□□□ -0.54
COMMD4-209ENST00000564068 NECAB3Q96P71 396 aaPredicted RBP11.71□□□□□ -0.54
COMMD4-209ENST00000564068 ABHD1Q96SE0 405 aa11.71□□□□□ -0.54
COMMD4-209ENST00000564068 HCAR1Q9BXC0 346 aa11.71□□□□□ -0.54
COMMD4-209ENST00000564068 KIAA1217Q5T5P2 1943 aa11.71□□□□□ -0.54
COMMD4-209ENST00000564068 TRBV5-4A0A0C4DH59 114 aa11.71□□□□□ -0.54
COMMD4-209ENST00000564068 TMEM82A0PJX8 343 aa11.71□□□□□ -0.54
COMMD4-209ENST00000564068 LCMT2O60294 686 aaKnown RBP11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms