RNA–Protein interactions for RNA: ENST00000563854.1

NME3-205, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-205ENST00000563854 EPS8Q12929 822 aa15.63■□□□□ 0.09
NME3-205ENST00000563854 LIN52Q52LA3 116 aa15.63■□□□□ 0.09
NME3-205ENST00000563854 AP1ARQ63HQ0 302 aa15.63■□□□□ 0.09
NME3-205ENST00000563854 CASP12Q6UXS9 341 aa15.63■□□□□ 0.09
NME3-205ENST00000563854 ZNF836Q6ZNA1 936 aa15.63■□□□□ 0.09
NME3-205ENST00000563854 KBTBD8Q8NFY9 601 aa15.63■□□□□ 0.09
NME3-205ENST00000563854 MUCL1Q96DR8 90 aa15.63■□□□□ 0.09
NME3-205ENST00000563854 GSX2Q9BZM3 304 aa15.63■□□□□ 0.09
NME3-205ENST00000563854 TPT1P8Q9HAU6 139 aa15.63■□□□□ 0.09
NME3-205ENST00000563854 CALML5Q9NZT1 146 aa15.63■□□□□ 0.09
NME3-205ENST00000563854 TMEM181Q9P2C4 612 aa15.63■□□□□ 0.09
NME3-205ENST00000563854 FREM1Q5H8C1 2179 aa15.63■□□□□ 0.09
NME3-205ENST00000563854 IGKV3D-15A0A087WSY6 115 aa15.62■□□□□ 0.09
NME3-205ENST00000563854 CIB4A0PJX0 185 aa15.62■□□□□ 0.09
NME3-205ENST00000563854 ZC3H12DA2A288 527 aaKnown RBP15.62■□□□□ 0.09
NME3-205ENST00000563854 TMEM247A6NEH6 219 aa15.62■□□□□ 0.09
NME3-205ENST00000563854 GPR171O14626 319 aa15.62■□□□□ 0.09
NME3-205ENST00000563854 KLF11O14901 512 aa15.62■□□□□ 0.09
NME3-205ENST00000563854 GGT1P19440 569 aa15.62■□□□□ 0.09
NME3-205ENST00000563854 FKBP2P26885 142 aaKnown RBP15.62■□□□□ 0.09
NME3-205ENST00000563854 SLC1A3P43003 542 aa15.62■□□□□ 0.09
NME3-205ENST00000563854 CLK1P49759 484 aaKnown RBP15.62■□□□□ 0.09
NME3-205ENST00000563854 MVDP53602 400 aa15.62■□□□□ 0.09
NME3-205ENST00000563854 ATP5J2P56134 94 aa15.62■□□□□ 0.09
NME3-205ENST00000563854 RPS4XP62701 263 aaKnown RBP15.62■□□□□ 0.09
NME3-205ENST00000563854 MAPK11Q15759 364 aa15.62■□□□□ 0.09
NME3-205ENST00000563854 FBXW9Q5XUX1 488 aa15.62■□□□□ 0.09
NME3-205ENST00000563854 SLC2A7Q6PXP3 512 aa15.62■□□□□ 0.09
NME3-205ENST00000563854 ZNF440Q8IYI8 595 aa15.62■□□□□ 0.09
NME3-205ENST00000563854 FBXW5Q969U6 566 aa15.62■□□□□ 0.09
NME3-205ENST00000563854 TMEM19Q96HH6 336 aa15.62■□□□□ 0.09
NME3-205ENST00000563854 USB1Q9BQ65 265 aaKnown RBP15.62■□□□□ 0.09
NME3-205ENST00000563854 BDH2Q9BUT1 245 aa15.62■□□□□ 0.09
NME3-205ENST00000563854 ZNF443Q9Y2A4 671 aaPredicted RBP15.62■□□□□ 0.09
NME3-205ENST00000563854 PRR14LQ5THK1 2151 aa15.61■□□□□ 0.09
NME3-205ENST00000563854 FAM234BA2RU67 622 aa15.61■□□□□ 0.09
NME3-205ENST00000563854 POLR3GO15318 223 aaPredicted RBP15.61■□□□□ 0.09
NME3-205ENST00000563854 DNPH1O43598 174 aa15.61■□□□□ 0.09
NME3-205ENST00000563854 MRPL33O75394 65 aaKnown RBP15.61■□□□□ 0.09
NME3-205ENST00000563854 ZCCHC18P0CG32 403 aa15.61■□□□□ 0.09
NME3-205ENST00000563854 IMPDH2P12268 514 aa15.61■□□□□ 0.09
NME3-205ENST00000563854 HOXB4P17483 251 aaPredicted RBP15.61■□□□□ 0.09
NME3-205ENST00000563854 NCF2P19878 526 aaPredicted RBP15.61■□□□□ 0.09
NME3-205ENST00000563854 COX5AP20674 150 aa15.61■□□□□ 0.09
NME3-205ENST00000563854 CXCR1P25024 350 aa15.61■□□□□ 0.09
NME3-205ENST00000563854 SLC35A1P78382 337 aa15.61■□□□□ 0.09
NME3-205ENST00000563854 FAPQ12884 760 aa15.61■□□□□ 0.09
NME3-205ENST00000563854 PDK3Q15120 406 aa15.61■□□□□ 0.09
NME3-205ENST00000563854 AGBL2Q5U5Z8 902 aa15.61■□□□□ 0.09
NME3-205ENST00000563854 C9orf135Q5VTT2 229 aa15.61■□□□□ 0.09
NME3-205ENST00000563854 PRSS57Q6UWY2 283 aa15.61■□□□□ 0.09
NME3-205ENST00000563854 MSANTD1Q6ZTZ1 278 aa15.61■□□□□ 0.09
NME3-205ENST00000563854 ZNF433Q8N7K0 673 aaPredicted RBP15.61■□□□□ 0.09
NME3-205ENST00000563854 OR52N5Q8NH56 324 aa15.61■□□□□ 0.09
NME3-205ENST00000563854 LILRB1Q8NHL6 650 aaPredicted RBP15.61■□□□□ 0.09
NME3-205ENST00000563854 LRRC8CQ8TDW0 803 aa15.61■□□□□ 0.09
NME3-205ENST00000563854 SLC38A5Q8WUX1 472 aa15.61■□□□□ 0.09
NME3-205ENST00000563854 PMM1Q92871 262 aa15.61■□□□□ 0.09
NME3-205ENST00000563854 GTPBP3Q969Y2 492 aaKnown RBP15.61■□□□□ 0.09
NME3-205ENST00000563854 COX4I2Q96KJ9 171 aa15.61■□□□□ 0.09
NME3-205ENST00000563854 NAA11Q9BSU3 229 aaPredicted RBP15.61■□□□□ 0.09
NME3-205ENST00000563854 A0A1W2PP18 115 aa15.6■□□□□ 0.09
NME3-205ENST00000563854 A0A1W2PR80 420 aa15.6■□□□□ 0.09
NME3-205ENST00000563854 CDHR4A6H8M9 788 aa15.6■□□□□ 0.09
NME3-205ENST00000563854 DPRXA6NFQ7 191 aa15.6■□□□□ 0.09
NME3-205ENST00000563854 FAAHO00519 579 aa15.6■□□□□ 0.09
NME3-205ENST00000563854 ZNF208O43345 1280 aa15.6■□□□□ 0.09
NME3-205ENST00000563854 TFPTP0C1Z6 253 aa15.6■□□□□ 0.09
NME3-205ENST00000563854 IDUAP35475 653 aa15.6■□□□□ 0.09
NME3-205ENST00000563854 COPZ1P61923 177 aa15.6■□□□□ 0.09
NME3-205ENST00000563854 LARS2Q15031 903 aaKnown RBP15.6■□□□□ 0.09
NME3-205ENST00000563854 OR7A5Q15622 319 aa15.6■□□□□ 0.09
NME3-205ENST00000563854 ZNF672Q499Z4 452 aaPredicted RBP15.6■□□□□ 0.09
NME3-205ENST00000563854 TIMM23BQ5SRD1 257 aa15.6■□□□□ 0.09
NME3-205ENST00000563854 EPGNQ6UW88 154 aa15.6■□□□□ 0.09
NME3-205ENST00000563854 SEZ6L2Q6UXD5 910 aa15.6■□□□□ 0.09
NME3-205ENST00000563854 DYDC1Q8WWB3 177 aa15.6■□□□□ 0.09
NME3-205ENST00000563854 IGFBPL1Q8WX77 278 aa15.6■□□□□ 0.09
NME3-205ENST00000563854 SLCO1B3Q9NPD5 702 aa15.6■□□□□ 0.09
NME3-205ENST00000563854 TCF7L2Q9NQB0 619 aa15.6■□□□□ 0.09
NME3-205ENST00000563854 ASB6Q9NWX5 421 aa15.6■□□□□ 0.09
NME3-205ENST00000563854 TRAPPC4Q9Y296 219 aa15.6■□□□□ 0.09
NME3-205ENST00000563854 DSPPQ9NZW4 1301 aa15.6■□□□□ 0.09
NME3-205ENST00000563854 ARID1AO14497 2285 aa15.6■□□□□ 0.09
NME3-205ENST00000563854 ROS1P08922 2347 aa15.6■□□□□ 0.09
NME3-205ENST00000563854 NAV3Q8IVL0 2385 aa15.6■□□□□ 0.09
NME3-205ENST00000563854 OR5H1A6NKK0 313 aa15.59■□□□□ 0.09
NME3-205ENST00000563854 NR5A2O00482 541 aa15.59■□□□□ 0.09
NME3-205ENST00000563854 EIF1BO60739 113 aaKnown RBP15.59■□□□□ 0.09
NME3-205ENST00000563854 CNOT4O95628 575 aaKnown RBP15.59■□□□□ 0.09
NME3-205ENST00000563854 LY6G6DO95868 133 aa15.59■□□□□ 0.09
NME3-205ENST00000563854 SOD3P08294 240 aa15.59■□□□□ 0.09
NME3-205ENST00000563854 NUDT7P0C024 238 aa15.59■□□□□ 0.09
NME3-205ENST00000563854 PRG2P13727 222 aa15.59■□□□□ 0.09
NME3-205ENST00000563854 NTF4P34130 210 aa15.59■□□□□ 0.09
NME3-205ENST00000563854 CDKN1AP38936 164 aa15.59■□□□□ 0.09
NME3-205ENST00000563854 SLC16A1P53985 500 aa15.59■□□□□ 0.09
NME3-205ENST00000563854 CDH11P55287 796 aa15.59■□□□□ 0.09
NME3-205ENST00000563854 BNIP2Q12982 314 aa15.59■□□□□ 0.09
NME3-205ENST00000563854 CEACAM7Q14002 265 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms