RNA–Protein interactions for RNA: ENST00000563498.1

NME3-204, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2 BASIC

Gene NME3, Length 920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-204ENST00000563498 TYW3Q6IPR3 259 aaKnown RBP16.34■□□□□ 0.21
NME3-204ENST00000563498 EMBQ6PCB8 327 aa16.34■□□□□ 0.21
NME3-204ENST00000563498 CASP12Q6UXS9 341 aa16.34■□□□□ 0.21
NME3-204ENST00000563498 OLIG3Q7RTU3 272 aa16.34■□□□□ 0.21
NME3-204ENST00000563498 EIF1ADQ8N9N8 165 aaKnown RBP16.34■□□□□ 0.21
NME3-204ENST00000563498 AGR3Q8TD06 166 aa16.34■□□□□ 0.21
NME3-204ENST00000563498 EPS8L3Q8TE67 593 aaKnown RBP16.34■□□□□ 0.21
NME3-204ENST00000563498 APOPT1Q96IL0 206 aa16.34■□□□□ 0.21
NME3-204ENST00000563498 PIMREGQ9BSJ6 248 aa16.34■□□□□ 0.21
NME3-204ENST00000563498 OR11A1Q9GZK7 315 aa16.34■□□□□ 0.21
NME3-204ENST00000563498 OR51I1Q9H343 314 aa16.34■□□□□ 0.21
NME3-204ENST00000563498 MYOZ1Q9NP98 299 aaPredicted RBP16.34■□□□□ 0.21
NME3-204ENST00000563498 SLC7A10Q9NS82 523 aa16.34■□□□□ 0.21
NME3-204ENST00000563498 UPB1Q9UBR1 384 aa16.34■□□□□ 0.21
NME3-204ENST00000563498 PCDHGB4Q9UN71 923 aa16.34■□□□□ 0.21
NME3-204ENST00000563498 WDR45Q9Y484 360 aa16.34■□□□□ 0.21
NME3-204ENST00000563498 FLVCR1Q9Y5Y0 555 aa16.34■□□□□ 0.21
NME3-204ENST00000563498 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.34■□□□□ 0.219e-14■■■■□ 24.2
NME3-204ENST00000563498 ATP6V1G2-DDX39BF2Z307 99 aa16.33■□□□□ 0.2
NME3-204ENST00000563498 RNASET2O00584 256 aaKnown RBP16.33■□□□□ 0.2
NME3-204ENST00000563498 BCAS1O75363 584 aaPredicted RBP16.33■□□□□ 0.2
NME3-204ENST00000563498 LY6HO94772 140 aa16.33■□□□□ 0.2
NME3-204ENST00000563498 G6PDP11413 515 aa16.33■□□□□ 0.2
NME3-204ENST00000563498 HNF1AP20823 631 aa16.33■□□□□ 0.2
NME3-204ENST00000563498 RYKP34925 604 aa16.33■□□□□ 0.2
NME3-204ENST00000563498 NR4A2P43354 598 aa16.33■□□□□ 0.2
NME3-204ENST00000563498 OR2B6P58173 313 aa16.33■□□□□ 0.2
NME3-204ENST00000563498 PRPS1P60891 318 aa16.33■□□□□ 0.2
NME3-204ENST00000563498 SLC35A1P78382 337 aa16.33■□□□□ 0.2
NME3-204ENST00000563498 SLC25A3Q00325 362 aa16.33■□□□□ 0.2
NME3-204ENST00000563498 MAD2L1Q13257 205 aaPredicted RBP16.33■□□□□ 0.2
NME3-204ENST00000563498 MST1LQ2TV78 715 aa16.33■□□□□ 0.2
NME3-204ENST00000563498 PGS1Q32NB8 556 aa16.33■□□□□ 0.2
NME3-204ENST00000563498 CLECL1Q8IZS7 167 aa16.33■□□□□ 0.2
NME3-204ENST00000563498 UBLCP1Q8WVY7 318 aaPredicted RBP16.33■□□□□ 0.2
NME3-204ENST00000563498 TUBGCP3Q96CW5 907 aa16.33■□□□□ 0.2
NME3-204ENST00000563498 MSI2Q96DH6 328 aaKnown RBP16.33■□□□□ 0.2
NME3-204ENST00000563498 BOD1Q96IK1 185 aa16.33■□□□□ 0.2
NME3-204ENST00000563498 RHOXF2Q9BQY4 288 aa16.33■□□□□ 0.2
NME3-204ENST00000563498 PRR14Q9BWN1 585 aa16.33■□□□□ 0.2
NME3-204ENST00000563498 ASIC5Q9NY37 505 aa16.33■□□□□ 0.2
NME3-204ENST00000563498 MALRD1Q5VYJ5 2156 aa16.33■□□□□ 0.2
NME3-204ENST00000563498 SVEP1Q4LDE5 3571 aa16.32■□□□□ 0.2
NME3-204ENST00000563498 LOC100289279A0A1B0GTE1 492 aa16.32■□□□□ 0.2
NME3-204ENST00000563498 SLC35F4A4IF30 521 aa16.32■□□□□ 0.2
NME3-204ENST00000563498 HAX1O00165 279 aa16.32■□□□□ 0.2
NME3-204ENST00000563498 ZNF208O43345 1280 aa16.32■□□□□ 0.2
NME3-204ENST00000563498 WNT11O96014 354 aa16.32■□□□□ 0.2
NME3-204ENST00000563498 MPGP29372 298 aa16.32■□□□□ 0.2
NME3-204ENST00000563498 MAP2K6P52564 334 aa16.32■□□□□ 0.2
NME3-204ENST00000563498 KCNJ10P78508 379 aa16.32■□□□□ 0.2
NME3-204ENST00000563498 EMX2Q04743 252 aa16.32■□□□□ 0.2
NME3-204ENST00000563498 GGTLC2Q14390 218 aa16.32■□□□□ 0.2
NME3-204ENST00000563498 SLC17A1Q14916 467 aa16.32■□□□□ 0.2
NME3-204ENST00000563498 TSPO2Q5TGU0 170 aa16.32■□□□□ 0.2
NME3-204ENST00000563498 C9orf135Q5VTT2 229 aa16.32■□□□□ 0.2
NME3-204ENST00000563498 OR4F3Q6IEY1 312 aa16.32■□□□□ 0.2
NME3-204ENST00000563498 GSPT2Q8IYD1 628 aaKnown RBP16.32■□□□□ 0.2
NME3-204ENST00000563498 CLEC4FQ8N1N0 589 aa16.32■□□□□ 0.2
NME3-204ENST00000563498 ARFGAP2Q8N6H7 521 aa16.32■□□□□ 0.2
NME3-204ENST00000563498 OR8J2Q8NGG1 315 aa16.32■□□□□ 0.2
NME3-204ENST00000563498 PMM1Q92871 262 aa16.32■□□□□ 0.2
NME3-204ENST00000563498 TMEM45BQ96B21 275 aa16.32■□□□□ 0.2
NME3-204ENST00000563498 ROPN1LQ96C74 230 aa16.32■□□□□ 0.2
NME3-204ENST00000563498 NAA11Q9BSU3 229 aaPredicted RBP16.32■□□□□ 0.2
NME3-204ENST00000563498 MECRQ9BV79 373 aa16.32■□□□□ 0.2
NME3-204ENST00000563498 CHODLQ9H9P2 273 aa16.32■□□□□ 0.2
NME3-204ENST00000563498 NOP53Q9NZM5 478 aaKnown RBP16.32■□□□□ 0.2
NME3-204ENST00000563498 HEATR1Q9H583 2144 aaKnown RBP16.31■□□□□ 0.2
NME3-204ENST00000563498 LOC390937A0A1W2PQ73 354 aa16.31■□□□□ 0.2
NME3-204ENST00000563498 SKAP2O75563 359 aaPredicted RBP16.31■□□□□ 0.2
NME3-204ENST00000563498 OR12D1P0DN82 309 aa16.31■□□□□ 0.2
NME3-204ENST00000563498 PAX7P23759 505 aa16.31■□□□□ 0.2
NME3-204ENST00000563498 ARRB2P32121 409 aa16.31■□□□□ 0.2
NME3-204ENST00000563498 SNRPD2P62316 118 aaKnown RBP16.31■□□□□ 0.2
NME3-204ENST00000563498 PLAURQ03405 335 aa16.31■□□□□ 0.2
NME3-204ENST00000563498 FUT5Q11128 374 aa16.31■□□□□ 0.2
NME3-204ENST00000563498 SQLEQ14534 574 aa16.31■□□□□ 0.2
NME3-204ENST00000563498 SMU1Q2TAY7 513 aa16.31■□□□□ 0.2
NME3-204ENST00000563498 PAQR6Q6TCH4 344 aa16.31■□□□□ 0.2
NME3-204ENST00000563498 KLHL24Q6TFL4 600 aa16.31■□□□□ 0.2
NME3-204ENST00000563498 FRRS1Q6ZNA5 592 aa16.31■□□□□ 0.2
NME3-204ENST00000563498 OR4A15Q8NGL6 344 aa16.31■□□□□ 0.2
NME3-204ENST00000563498 XAGE5Q8WWM1 108 aa16.31■□□□□ 0.2
NME3-204ENST00000563498 DDIT4LQ96D03 193 aa16.31■□□□□ 0.2
NME3-204ENST00000563498 FBXO17Q96EF6 278 aa16.31■□□□□ 0.2
NME3-204ENST00000563498 DNAJA3Q96EY1 480 aa16.31■□□□□ 0.2
NME3-204ENST00000563498 SORCS2Q96PQ0 1159 aa16.31■□□□□ 0.2
NME3-204ENST00000563498 OBP2BQ9NPH6 170 aa16.31■□□□□ 0.2
NME3-204ENST00000563498 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.31■□□□□ 0.2
NME3-204ENST00000563498 ZDHHC2Q9UIJ5 367 aa16.31■□□□□ 0.2
NME3-204ENST00000563498 MOKQ9UQ07 419 aa16.31■□□□□ 0.2
NME3-204ENST00000563498 ARFGEF3Q5TH69 2177 aa16.3■□□□□ 0.2
NME3-204ENST00000563498 TMED7-TICAM2A0A0A6YYA0 188 aa16.3■□□□□ 0.2
NME3-204ENST00000563498 IMPDH2P12268 514 aa16.3■□□□□ 0.2
NME3-204ENST00000563498 APEHP13798 732 aaKnown RBP16.3■□□□□ 0.2
NME3-204ENST00000563498 CCNA2P20248 432 aa16.3■□□□□ 0.2
NME3-204ENST00000563498 UQCRC2P22695 453 aa16.3■□□□□ 0.2
NME3-204ENST00000563498 IDH2P48735 452 aaKnown RBP16.3■□□□□ 0.2
NME3-204ENST00000563498 POLR2HP52434 150 aaKnown RBP16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms