RNA–Protein interactions for RNA: ENST00000563418.2

CLK3-212, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 10,498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-212ENST00000563418 ANGPTL7O43827 346 aa5.86□□□□□ -1.47
CLK3-212ENST00000563418 CELF2O95319 508 aaKnown RBP5.86□□□□□ -1.47
CLK3-212ENST00000563418 OPN1MWP04001 364 aa5.86□□□□□ -1.47
CLK3-212ENST00000563418 DBIP07108 87 aaKnown RBP5.86□□□□□ -1.47
CLK3-212ENST00000563418 OPN1MW2P0DN77 364 aa5.86□□□□□ -1.47
CLK3-212ENST00000563418 OPN1MW3P0DN78 364 aa5.86□□□□□ -1.47
CLK3-212ENST00000563418 KCNJ3P48549 501 aa5.86□□□□□ -1.47
CLK3-212ENST00000563418 SLC5A12Q1EHB4 618 aa5.86□□□□□ -1.47
CLK3-212ENST00000563418 LGALSLQ3ZCW2 172 aaPredicted RBP5.86□□□□□ -1.47
CLK3-212ENST00000563418 GPR157Q5UAW9 335 aa5.86□□□□□ -1.47
CLK3-212ENST00000563418 GLRX5Q86SX6 157 aa5.86□□□□□ -1.47
CLK3-212ENST00000563418 OR1E3Q8WZA6 343 aa5.86□□□□□ -1.47
CLK3-212ENST00000563418 GGACTQ9BVM4 153 aa5.86□□□□□ -1.47
CLK3-212ENST00000563418 ZDHHC4Q9NPG8 344 aa5.86□□□□□ -1.47
CLK3-212ENST00000563418 TLR9Q9NR96 1032 aa5.86□□□□□ -1.47
CLK3-212ENST00000563418 RASL12Q9NYN1 266 aa5.86□□□□□ -1.47
CLK3-212ENST00000563418 SUSD5O60279 629 aa5.86□□□□□ -1.47
CLK3-212ENST00000563418 PRSS23O95084 383 aa5.86□□□□□ -1.47
CLK3-212ENST00000563418 CHRM4P08173 479 aa5.86□□□□□ -1.47
CLK3-212ENST00000563418 LINC00614P0C842 121 aa5.86□□□□□ -1.47
CLK3-212ENST00000563418 ICAM2P13598 275 aa5.86□□□□□ -1.47
CLK3-212ENST00000563418 CD82P27701 267 aa5.86□□□□□ -1.47
CLK3-212ENST00000563418 HTR1FP30939 366 aa5.86□□□□□ -1.47
CLK3-212ENST00000563418 IFITM3Q01628 133 aa5.86□□□□□ -1.47
CLK3-212ENST00000563418 TPBGQ13641 420 aa5.86□□□□□ -1.47
CLK3-212ENST00000563418 NKX1-1Q15270 411 aaPredicted RBP5.86□□□□□ -1.47
CLK3-212ENST00000563418 ZNF628Q5EBL2 1059 aa5.86□□□□□ -1.47
CLK3-212ENST00000563418 CARD16Q5EG05 197 aa5.86□□□□□ -1.47
CLK3-212ENST00000563418 C9orf57Q5W0N0 161 aa5.86□□□□□ -1.47
CLK3-212ENST00000563418 RPS27LQ71UM5 84 aaKnown RBP5.86□□□□□ -1.47
CLK3-212ENST00000563418 MDGA2Q7Z553 956 aa5.86□□□□□ -1.47
CLK3-212ENST00000563418 CBLN2Q8IUK8 224 aa5.86□□□□□ -1.47
CLK3-212ENST00000563418 EXD3Q8N9H8 876 aa5.86□□□□□ -1.47
CLK3-212ENST00000563418 GPR148Q8TDV2 347 aa5.86□□□□□ -1.47
CLK3-212ENST00000563418 RBMXL1Q96E39 390 aaKnown RBP5.86□□□□□ -1.47
CLK3-212ENST00000563418 ZNF668Q96K58 619 aaPredicted RBP5.86□□□□□ -1.47
CLK3-212ENST00000563418 DPH2Q9BQC3 489 aaPredicted RBP5.86□□□□□ -1.47
CLK3-212ENST00000563418 NSUN3Q9H649 340 aaKnown RBP5.86□□□□□ -1.47
CLK3-212ENST00000563418 BPIFA1Q9NP55 256 aa5.86□□□□□ -1.47
CLK3-212ENST00000563418 IL26Q9NPH9 171 aa5.86□□□□□ -1.47
CLK3-212ENST00000563418 CREBZFQ9NS37 354 aa5.86□□□□□ -1.47
CLK3-212ENST00000563418 A8MXK9 166 aa5.86□□□□□ -1.47
CLK3-212ENST00000563418 ZNF593O00488 134 aaPredicted RBP5.86□□□□□ -1.47
CLK3-212ENST00000563418 TCF21O43680 179 aa5.86□□□□□ -1.47
CLK3-212ENST00000563418 EDNRBP24530 442 aa5.86□□□□□ -1.47
CLK3-212ENST00000563418 MAMDC2Q7Z304 686 aaPredicted RBP5.86□□□□□ -1.47
CLK3-212ENST00000563418 KIAA0319LQ8IZA0 1049 aa5.86□□□□□ -1.47
CLK3-212ENST00000563418 OR52I1Q8NGK6 324 aa5.86□□□□□ -1.47
CLK3-212ENST00000563418 C12orf42Q96LP6 360 aa5.86□□□□□ -1.47
CLK3-212ENST00000563418 LYSMD1Q96S90 227 aa5.86□□□□□ -1.47
CLK3-212ENST00000563418 CAPN10Q9HC96 672 aa5.86□□□□□ -1.47
CLK3-212ENST00000563418 EXOGQ9Y2C4 368 aaKnown RBP5.86□□□□□ -1.47
CLK3-212ENST00000563418 PCM1Q15154 2024 aa5.86□□□□□ -1.47
CLK3-212ENST00000563418 MCRIP1C9JLW8 97 aa5.85□□□□□ -1.47
CLK3-212ENST00000563418 FABP6P51161 128 aa5.85□□□□□ -1.47
CLK3-212ENST00000563418 AKR1C1Q04828 323 aa5.85□□□□□ -1.47
CLK3-212ENST00000563418 SLC14A2Q15849 920 aa5.85□□□□□ -1.47
CLK3-212ENST00000563418 ZNF74Q16587 644 aa5.85□□□□□ -1.47
CLK3-212ENST00000563418 C11orf87Q6NUJ2 197 aa5.85□□□□□ -1.47
CLK3-212ENST00000563418 FJX1Q86VR8 437 aa5.85□□□□□ -1.47
CLK3-212ENST00000563418 ZNF619Q8N2I2 560 aa5.85□□□□□ -1.47
CLK3-212ENST00000563418 ZNF281Q9Y2X9 895 aa5.85□□□□□ -1.47
CLK3-212ENST00000563418 TMEM184BQ9Y519 407 aaPredicted RBP5.85□□□□□ -1.47
CLK3-212ENST00000563418 PCDHGA9Q9Y5G4 932 aaKnown RBP5.85□□□□□ -1.47
CLK3-212ENST00000563418 LOC730098B7Z3J9 87 aa5.85□□□□□ -1.47
CLK3-212ENST00000563418 CDX1P47902 265 aaPredicted RBP5.85□□□□□ -1.47
CLK3-212ENST00000563418 BEX3Q00994 111 aa5.85□□□□□ -1.47
CLK3-212ENST00000563418 OR5I1Q13606 314 aa5.85□□□□□ -1.47
CLK3-212ENST00000563418 ODF4Q2M2E3 257 aa5.85□□□□□ -1.47
CLK3-212ENST00000563418 RELL2Q8NC24 303 aaPredicted RBP5.85□□□□□ -1.47
CLK3-212ENST00000563418 GOT1L1Q8NHS2 421 aaPredicted RBP5.85□□□□□ -1.47
CLK3-212ENST00000563418 ZNF461Q8TAF7 563 aa5.85□□□□□ -1.47
CLK3-212ENST00000563418 CCDC3Q9BQI4 270 aa5.85□□□□□ -1.47
CLK3-212ENST00000563418 CSNK1G1Q9HCP0 422 aa5.85□□□□□ -1.47
CLK3-212ENST00000563418 PIGVQ9NUD9 493 aa5.85□□□□□ -1.47
CLK3-212ENST00000563418 KCNS2Q9ULS6 477 aa5.85□□□□□ -1.47
CLK3-212ENST00000563418 AK6Q9Y3D8 172 aaKnown RBP5.85□□□□□ -1.47
CLK3-212ENST00000563418 PCDHGA2Q9Y5H1 932 aa5.85□□□□□ -1.47
CLK3-212ENST00000563418 URGCP-MRPS24S4R325 110 aa5.85□□□□□ -1.47
CLK3-212ENST00000563418 CDK5RAP2Q96SN8 1893 aa5.85□□□□□ -1.47
CLK3-212ENST00000563418 TMEM150BA6NC51 233 aa5.85□□□□□ -1.47
CLK3-212ENST00000563418 GFRA2O00451 464 aa5.85□□□□□ -1.47
CLK3-212ENST00000563418 PEX10O60683 326 aa5.85□□□□□ -1.47
CLK3-212ENST00000563418 ENDOD1O94919 500 aa5.85□□□□□ -1.47
CLK3-212ENST00000563418 PLGP00747 810 aaPredicted RBP5.85□□□□□ -1.47
CLK3-212ENST00000563418 NMBP08949 121 aa5.85□□□□□ -1.47
CLK3-212ENST00000563418 CT45A8P0DMV1 189 aa5.85□□□□□ -1.47
CLK3-212ENST00000563418 CT45A9P0DMV2 189 aa5.85□□□□□ -1.47
CLK3-212ENST00000563418 PBLDP30039 288 aaPredicted RBP5.85□□□□□ -1.47
CLK3-212ENST00000563418 CT45A2Q5DJT8 189 aa5.85□□□□□ -1.47
CLK3-212ENST00000563418 STEAP1BQ6NZ63 245 aa5.85□□□□□ -1.47
CLK3-212ENST00000563418 MEPCEQ7L2J0 689 aaKnown RBP5.85□□□□□ -1.47
CLK3-212ENST00000563418 PLPPR4Q7Z2D5 763 aa5.85□□□□□ -1.47
CLK3-212ENST00000563418 COX18Q8N8Q8 333 aa5.85□□□□□ -1.47
CLK3-212ENST00000563418 FAM213BQ8TBF2 198 aa5.85□□□□□ -1.47
CLK3-212ENST00000563418 FUBP1Q96AE4 644 aaKnown RBP5.85□□□□□ -1.47
CLK3-212ENST00000563418 SLC2A6Q9UGQ3 507 aa5.85□□□□□ -1.47
CLK3-212ENST00000563418 CXorf65A6NEN9 183 aa5.85□□□□□ -1.47
CLK3-212ENST00000563418 H7BYZ3 331 aa5.85□□□□□ -1.47
CLK3-212ENST00000563418 K7ERQ8 282 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms