RNA–Protein interactions for RNA: ENST00000563400.1

VPS35P1-201, Transcript of VPS35, retromer complex component pseudogene 1, humanhuman

BASIC

Gene VPS35P1, Length 1,518 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35P1-201ENST00000563400 FRMPD3Q5JV73 1810 aa4.61□□□□□ -1.67
VPS35P1-201ENST00000563400 ADAMTS20P59510 1910 aa4.61□□□□□ -1.67
VPS35P1-201ENST00000563400 TTC3P53804 2025 aa4.61□□□□□ -1.67
VPS35P1-201ENST00000563400 MYH11P35749 1972 aa4.61□□□□□ -1.67
VPS35P1-201ENST00000563400 ARID2Q68CP9 1835 aa4.61□□□□□ -1.67
VPS35P1-201ENST00000563400 FRG2CA6NGY1 282 aa4.61□□□□□ -1.67
VPS35P1-201ENST00000563400 SERINC4A6NH21 518 aa4.61□□□□□ -1.67
VPS35P1-201ENST00000563400 FAM74A7A6NL05 159 aa4.61□□□□□ -1.67
VPS35P1-201ENST00000563400 OR7A17O14581 309 aa4.61□□□□□ -1.67
VPS35P1-201ENST00000563400 SLC9A3R1O14745 358 aaPredicted RBP4.61□□□□□ -1.67
VPS35P1-201ENST00000563400 WNT9BO14905 357 aa4.61□□□□□ -1.67
VPS35P1-201ENST00000563400 AIREO43918 545 aa4.61□□□□□ -1.67
VPS35P1-201ENST00000563400 ASS1P00966 412 aaKnown RBP4.61□□□□□ -1.67
VPS35P1-201ENST00000563400 WARSP23381 471 aaKnown RBP4.61□□□□□ -1.67
VPS35P1-201ENST00000563400 CRYBB2P43320 205 aa4.61□□□□□ -1.67
VPS35P1-201ENST00000563400 BRCC3P46736 316 aa4.61□□□□□ -1.67
VPS35P1-201ENST00000563400 P2RY1P47900 373 aa4.61□□□□□ -1.67
VPS35P1-201ENST00000563400 HLCSP50747 726 aa4.61□□□□□ -1.67
VPS35P1-201ENST00000563400 ART1P52961 327 aa4.61□□□□□ -1.67
VPS35P1-201ENST00000563400 PSMD4P55036 377 aaKnown RBP4.61□□□□□ -1.67
VPS35P1-201ENST00000563400 OR2B6P58173 313 aa4.61□□□□□ -1.67
VPS35P1-201ENST00000563400 GPX6P59796 221 aa4.61□□□□□ -1.67
VPS35P1-201ENST00000563400 ISL1P61371 349 aa4.61□□□□□ -1.67
VPS35P1-201ENST00000563400 ERVK-25P63136 954 aa4.61□□□□□ -1.67
VPS35P1-201ENST00000563400 LCN2P80188 198 aa4.61□□□□□ -1.67
VPS35P1-201ENST00000563400 OGDHQ02218 1023 aa4.61□□□□□ -1.67
VPS35P1-201ENST00000563400 EFEMP1Q12805 493 aa4.61□□□□□ -1.67
VPS35P1-201ENST00000563400 CALCOCO2Q13137 446 aa4.61□□□□□ -1.67
VPS35P1-201ENST00000563400 KLF5Q13887 457 aaPredicted RBP4.61□□□□□ -1.67
VPS35P1-201ENST00000563400 GPNMBQ14956 572 aa4.61□□□□□ -1.67
VPS35P1-201ENST00000563400 ODF4Q2M2E3 257 aa4.61□□□□□ -1.67
VPS35P1-201ENST00000563400 LSM12Q3MHD2 195 aaKnown RBP4.61□□□□□ -1.67
VPS35P1-201ENST00000563400 ACCSLQ4AC99 568 aa4.61□□□□□ -1.67
VPS35P1-201ENST00000563400 FAM74A3Q4VXF1 159 aa4.61□□□□□ -1.67
VPS35P1-201ENST00000563400 LY6G6FQ5SQ64 297 aa4.61□□□□□ -1.67
VPS35P1-201ENST00000563400 AGAP7PQ5VUJ5 663 aa4.61□□□□□ -1.67
VPS35P1-201ENST00000563400 ABHD12BQ7Z5M8 362 aaPredicted RBP4.61□□□□□ -1.67
VPS35P1-201ENST00000563400 CNGA4Q8IV77 575 aa4.61□□□□□ -1.67
VPS35P1-201ENST00000563400 MMAAQ8IVH4 418 aaKnown RBP4.61□□□□□ -1.67
VPS35P1-201ENST00000563400 CDK20Q8IZL9 346 aa4.61□□□□□ -1.67
VPS35P1-201ENST00000563400 GATSQ8NAP1 163 aa4.61□□□□□ -1.67
VPS35P1-201ENST00000563400 ZNF248Q8NDW4 579 aa4.61□□□□□ -1.67
VPS35P1-201ENST00000563400 VN1R2Q8NFZ6 395 aa4.61□□□□□ -1.67
VPS35P1-201ENST00000563400 OLIG1Q8TAK6 271 aa4.61□□□□□ -1.67
VPS35P1-201ENST00000563400 PIH1D2Q8WWB5 315 aa4.61□□□□□ -1.67
VPS35P1-201ENST00000563400 SMPDL3AQ92484 453 aa4.61□□□□□ -1.67
VPS35P1-201ENST00000563400 SMG7Q92540 1137 aaKnown RBP4.61□□□□□ -1.67
VPS35P1-201ENST00000563400 MRPS31Q92665 395 aaKnown RBP4.61□□□□□ -1.67
VPS35P1-201ENST00000563400 MYLPFQ96A32 169 aa4.61□□□□□ -1.67
VPS35P1-201ENST00000563400 UPRTQ96BW1 309 aa4.61□□□□□ -1.67
VPS35P1-201ENST00000563400 SMARCD1Q96GM5 515 aa4.61□□□□□ -1.67
VPS35P1-201ENST00000563400 PCED1BQ96HM7 432 aa4.61□□□□□ -1.67
VPS35P1-201ENST00000563400 AGAP4Q96P64 663 aa4.61□□□□□ -1.67
VPS35P1-201ENST00000563400 MBOAT4Q96T53 435 aa4.61□□□□□ -1.67
VPS35P1-201ENST00000563400 NAT9Q9BTE0 207 aa4.61□□□□□ -1.67
VPS35P1-201ENST00000563400 RPP25Q9BUL9 199 aaKnown RBP4.61□□□□□ -1.67
VPS35P1-201ENST00000563400 ANGPTL4Q9BY76 406 aa4.61□□□□□ -1.67
VPS35P1-201ENST00000563400 LRMDAQ9H2I8 198 aa4.61□□□□□ -1.67
VPS35P1-201ENST00000563400 CWH43Q9H720 699 aa4.61□□□□□ -1.67
VPS35P1-201ENST00000563400 POLD4Q9HCU8 107 aa4.61□□□□□ -1.67
VPS35P1-201ENST00000563400 CHST11Q9NPF2 352 aa4.61□□□□□ -1.67
VPS35P1-201ENST00000563400 SLC17A5Q9NRA2 495 aa4.61□□□□□ -1.67
VPS35P1-201ENST00000563400 IKZF2Q9UKS7 526 aa4.61□□□□□ -1.67
VPS35P1-201ENST00000563400 SLC6A5Q9Y345 797 aa4.61□□□□□ -1.67
VPS35P1-201ENST00000563400 TCAF1Q9Y4C2 921 aa4.61□□□□□ -1.67
VPS35P1-201ENST00000563400 PCNTO95613 3336 aa4.6□□□□□ -1.67
VPS35P1-201ENST00000563400 A0A1W2PPV9 198 aa4.6□□□□□ -1.67
VPS35P1-201ENST00000563400 CCT8L1PA6NM43 557 aa4.6□□□□□ -1.67
VPS35P1-201ENST00000563400 GOLGA8MH3BSY2 632 aa4.6□□□□□ -1.67
VPS35P1-201ENST00000563400 FOXS1O43638 330 aa4.6□□□□□ -1.67
VPS35P1-201ENST00000563400 HLA-DRAP01903 254 aa4.6□□□□□ -1.67
VPS35P1-201ENST00000563400 P04436 131 aa4.6□□□□□ -1.67
VPS35P1-201ENST00000563400 ANXA3P12429 323 aa4.6□□□□□ -1.67
VPS35P1-201ENST00000563400 ZNF26P17031 533 aaPredicted RBP4.6□□□□□ -1.67
VPS35P1-201ENST00000563400 NR4A1P22736 598 aa4.6□□□□□ -1.67
VPS35P1-201ENST00000563400 EPHA2P29317 976 aa4.6□□□□□ -1.67
VPS35P1-201ENST00000563400 HMOX2P30519 316 aa4.6□□□□□ -1.67
VPS35P1-201ENST00000563400 MATKP42679 507 aa4.6□□□□□ -1.67
VPS35P1-201ENST00000563400 GCLMP48507 274 aa4.6□□□□□ -1.67
VPS35P1-201ENST00000563400 ARPP19P56211 112 aa4.6□□□□□ -1.67
VPS35P1-201ENST00000563400 VBP1P61758 197 aa4.6□□□□□ -1.67
VPS35P1-201ENST00000563400 HOXA4Q00056 320 aaPredicted RBP4.6□□□□□ -1.67
VPS35P1-201ENST00000563400 HHEXQ03014 270 aa4.6□□□□□ -1.67
VPS35P1-201ENST00000563400 KLC1Q07866 573 aa4.6□□□□□ -1.67
VPS35P1-201ENST00000563400 SLAMF1Q13291 335 aa4.6□□□□□ -1.67
VPS35P1-201ENST00000563400 DGCR6Q14129 220 aa4.6□□□□□ -1.67
VPS35P1-201ENST00000563400 DUSP6Q16828 381 aa4.6□□□□□ -1.67
VPS35P1-201ENST00000563400 MIDNQ504T8 468 aa4.6□□□□□ -1.67
VPS35P1-201ENST00000563400 ZCWPW2Q504Y3 356 aa4.6□□□□□ -1.67
VPS35P1-201ENST00000563400 PLPP4Q5VZY2 271 aa4.6□□□□□ -1.67
VPS35P1-201ENST00000563400 NEPROQ6NW34 567 aa4.6□□□□□ -1.67
VPS35P1-201ENST00000563400 H3F3CQ6NXT2 135 aa4.6□□□□□ -1.67
VPS35P1-201ENST00000563400 SLC29A4Q7RTT9 530 aa4.6□□□□□ -1.67
VPS35P1-201ENST00000563400 DCXRQ7Z4W1 244 aa4.6□□□□□ -1.67
VPS35P1-201ENST00000563400 TMEM35BQ8NCS4 154 aa4.6□□□□□ -1.67
VPS35P1-201ENST00000563400 OR13C5Q8NGS8 318 aa4.6□□□□□ -1.67
VPS35P1-201ENST00000563400 CA5BP1Q8WTZ4 195 aa4.6□□□□□ -1.67
VPS35P1-201ENST00000563400 SLC35F5Q8WV83 523 aa4.6□□□□□ -1.67
VPS35P1-201ENST00000563400 NXPE2Q96DL1 559 aa4.6□□□□□ -1.67
VPS35P1-201ENST00000563400 PLEKHA8Q96JA3 519 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms