RNA–Protein interactions for RNA: ENST00000563235.5

SMG1-207, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-207ENST00000563235 GIPC3Q8TF64 312 aa4.34□□□□□ -1.71
SMG1-207ENST00000563235 ASB10Q8WXI3 467 aa4.34□□□□□ -1.71
SMG1-207ENST00000563235 TM9SF4Q92544 642 aa4.34□□□□□ -1.71
SMG1-207ENST00000563235 FAF2Q96CS3 445 aa4.34□□□□□ -1.71
SMG1-207ENST00000563235 WDYHV1Q96HA8 205 aa4.34□□□□□ -1.71
SMG1-207ENST00000563235 POM121L2Q96KW2 1035 aa4.34□□□□□ -1.71
SMG1-207ENST00000563235 VSTM2LQ96N03 204 aa4.34□□□□□ -1.71
SMG1-207ENST00000563235 DEFB118Q96PH6 123 aa4.34□□□□□ -1.71
SMG1-207ENST00000563235 MBOAT4Q96T53 435 aa4.34□□□□□ -1.71
SMG1-207ENST00000563235 C2orf88Q9BSF0 95 aa4.34□□□□□ -1.71
SMG1-207ENST00000563235 PCGF1Q9BSM1 259 aa4.34□□□□□ -1.71
SMG1-207ENST00000563235 ALG8Q9BVK2 526 aa4.34□□□□□ -1.71
SMG1-207ENST00000563235 GSTO2Q9H4Y5 243 aa4.34□□□□□ -1.71
SMG1-207ENST00000563235 SLA2Q9H6Q3 261 aa4.34□□□□□ -1.71
SMG1-207ENST00000563235 Q9N2K0 584 aa4.34□□□□□ -1.71
SMG1-207ENST00000563235 SLC38A7Q9NVC3 462 aa4.34□□□□□ -1.71
SMG1-207ENST00000563235 MAT2BQ9NZL9 334 aa4.34□□□□□ -1.71
SMG1-207ENST00000563235 KLHL21Q9UJP4 597 aa4.34□□□□□ -1.71
SMG1-207ENST00000563235 PDE10AQ9Y233 779 aa4.34□□□□□ -1.71
SMG1-207ENST00000563235 TMED7Q9Y3B3 224 aa4.34□□□□□ -1.71
SMG1-207ENST00000563235 TAF1LQ8IZX4 1826 aa4.34□□□□□ -1.71
SMG1-207ENST00000563235 CHD5Q8TDI0 1954 aa4.34□□□□□ -1.71
SMG1-207ENST00000563235 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.34□□□□□ -1.72
SMG1-207ENST00000563235 DISC1C4P0D8 188 aa4.34□□□□□ -1.72
SMG1-207ENST00000563235 PFDN6O15212 129 aa4.34□□□□□ -1.72
SMG1-207ENST00000563235 AQP8O94778 261 aa4.34□□□□□ -1.72
SMG1-207ENST00000563235 IFNW1P05000 195 aa4.34□□□□□ -1.72
SMG1-207ENST00000563235 FBP1P09467 338 aa4.34□□□□□ -1.72
SMG1-207ENST00000563235 SAGP10523 405 aaPredicted RBP4.34□□□□□ -1.72
SMG1-207ENST00000563235 FCER1AP12319 257 aa4.34□□□□□ -1.72
SMG1-207ENST00000563235 MAP2K4P45985 399 aa4.34□□□□□ -1.72
SMG1-207ENST00000563235 CDX1P47902 265 aaPredicted RBP4.34□□□□□ -1.72
SMG1-207ENST00000563235 TIAL1Q01085 375 aaKnown RBP eCLIP4.34□□□□□ -1.72
SMG1-207ENST00000563235 DEFA6Q01524 100 aa4.34□□□□□ -1.72
SMG1-207ENST00000563235 TCF15Q12870 199 aa4.34□□□□□ -1.72
SMG1-207ENST00000563235 OR4D1Q15615 310 aa4.34□□□□□ -1.72
SMG1-207ENST00000563235 CDKN3Q16667 212 aa4.34□□□□□ -1.72
SMG1-207ENST00000563235 LRRC36Q1X8D7 754 aa4.34□□□□□ -1.72
SMG1-207ENST00000563235 KLHL12Q53G59 568 aa4.34□□□□□ -1.72
SMG1-207ENST00000563235 C1orf220Q5T0J3 134 aa4.34□□□□□ -1.72
SMG1-207ENST00000563235 SAXO2Q658L1 398 aa4.34□□□□□ -1.72
SMG1-207ENST00000563235 RAD9BQ6WBX8 426 aa4.34□□□□□ -1.72
SMG1-207ENST00000563235 RPTNQ6XPR3 784 aa4.34□□□□□ -1.72
SMG1-207ENST00000563235 CATSPER1Q8NEC5 780 aa4.34□□□□□ -1.72
SMG1-207ENST00000563235 PXT1Q8NFP0 134 aa4.34□□□□□ -1.72
SMG1-207ENST00000563235 OR9A4Q8NGU2 314 aa4.34□□□□□ -1.72
SMG1-207ENST00000563235 C16orf78Q8WTQ4 265 aa4.34□□□□□ -1.72
SMG1-207ENST00000563235 BAALCQ8WXS3 180 aa4.34□□□□□ -1.72
SMG1-207ENST00000563235 TSNAXQ99598 290 aaKnown RBP4.34□□□□□ -1.72
SMG1-207ENST00000563235 SLC35A5Q9BS91 424 aa4.34□□□□□ -1.72
SMG1-207ENST00000563235 NUDT9Q9BW91 350 aa4.34□□□□□ -1.72
SMG1-207ENST00000563235 OR10A5Q9H207 317 aa4.34□□□□□ -1.72
SMG1-207ENST00000563235 TMBIM4Q9HC24 238 aa4.34□□□□□ -1.72
SMG1-207ENST00000563235 KRCC1Q9NPI7 259 aaPredicted RBP4.34□□□□□ -1.72
SMG1-207ENST00000563235 METP08581 1390 aa4.34□□□□□ -1.72
SMG1-207ENST00000563235 NSD3Q9BZ95 1437 aa4.34□□□□□ -1.72
SMG1-207ENST00000563235 KIF13BQ9NQT8 1826 aa4.34□□□□□ -1.72
SMG1-207ENST00000563235 LMO7Q8WWI1 1683 aa4.33□□□□□ -1.72
SMG1-207ENST00000563235 CNTNAP1P78357 1384 aa4.33□□□□□ -1.72
SMG1-207ENST00000563235 KBTBD11-OT1A0A1B0GTJ5 212 aa4.33□□□□□ -1.72
SMG1-207ENST00000563235 VPS37CA5D8V6 355 aaPredicted RBP4.33□□□□□ -1.72
SMG1-207ENST00000563235 CASKO14936 926 aa4.33□□□□□ -1.72
SMG1-207ENST00000563235 KLRC4O43908 158 aa4.33□□□□□ -1.72
SMG1-207ENST00000563235 EIF3GO75821 320 aaKnown RBP eCLIP4.33□□□□□ -1.72
SMG1-207ENST00000563235 ATP6V1B2P21281 511 aa4.33□□□□□ -1.72
SMG1-207ENST00000563235 NBL1P41271 181 aa4.33□□□□□ -1.72
SMG1-207ENST00000563235 KIR3DL1P43629 444 aa4.33□□□□□ -1.72
SMG1-207ENST00000563235 ASCL1P50553 236 aa4.33□□□□□ -1.72
SMG1-207ENST00000563235 HLCSP50747 726 aa4.33□□□□□ -1.72
SMG1-207ENST00000563235 DNA2P51530 1060 aa4.33□□□□□ -1.72
SMG1-207ENST00000563235 EIF4EBP2Q13542 120 aaPredicted RBP4.33□□□□□ -1.72
SMG1-207ENST00000563235 ITGA9Q13797 1035 aa4.33□□□□□ -1.72
SMG1-207ENST00000563235 VGLL4Q14135 290 aa4.33□□□□□ -1.72
SMG1-207ENST00000563235 HIST2H2ACQ16777 129 aaPredicted RBP4.33□□□□□ -1.72
SMG1-207ENST00000563235 WDR72Q3MJ13 1102 aa4.33□□□□□ -1.72
SMG1-207ENST00000563235 SLC36A2Q495M3 483 aa4.33□□□□□ -1.72
SMG1-207ENST00000563235 TIMM23BQ5SRD1 257 aa4.33□□□□□ -1.72
SMG1-207ENST00000563235 IDNKQ5T6J7 187 aa4.33□□□□□ -1.72
SMG1-207ENST00000563235 WDR25Q64LD2 544 aaPredicted RBP4.33□□□□□ -1.72
SMG1-207ENST00000563235 LAIR1Q6GTX8 287 aa4.33□□□□□ -1.72
SMG1-207ENST00000563235 FAM71F2Q6NXP2 309 aa4.33□□□□□ -1.72
SMG1-207ENST00000563235 LINGO4Q6UY18 593 aa4.33□□□□□ -1.72
SMG1-207ENST00000563235 DYMQ7RTS9 669 aa4.33□□□□□ -1.72
SMG1-207ENST00000563235 LDLRAD3Q86YD5 345 aa4.33□□□□□ -1.72
SMG1-207ENST00000563235 BEND7Q8N7W2 519 aaPredicted RBP4.33□□□□□ -1.72
SMG1-207ENST00000563235 OR52I1Q8NGK6 324 aa4.33□□□□□ -1.72
SMG1-207ENST00000563235 OR10K1Q8NGX5 313 aa4.33□□□□□ -1.72
SMG1-207ENST00000563235 EDARADDQ8WWZ3 215 aa4.33□□□□□ -1.72
SMG1-207ENST00000563235 HAUS1Q96CS2 278 aa4.33□□□□□ -1.72
SMG1-207ENST00000563235 LGALS12Q96DT0 336 aa4.33□□□□□ -1.72
SMG1-207ENST00000563235 PSMG3-AS1Q96PY0 264 aa4.33□□□□□ -1.72
SMG1-207ENST00000563235 IL12RB2Q99665 862 aa4.33□□□□□ -1.72
SMG1-207ENST00000563235 OR51M1Q9H341 326 aa4.33□□□□□ -1.72
SMG1-207ENST00000563235 C1orf109Q9NX04 203 aa4.33□□□□□ -1.72
SMG1-207ENST00000563235 CCDC59Q9P031 241 aaKnown RBP4.33□□□□□ -1.72
SMG1-207ENST00000563235 GHRLQ9UBU3 117 aa4.33□□□□□ -1.72
SMG1-207ENST00000563235 CLN8Q9UBY8 286 aa4.33□□□□□ -1.72
SMG1-207ENST00000563235 MRPS28Q9Y2Q9 187 aaKnown RBP4.33□□□□□ -1.72
SMG1-207ENST00000563235 CDH10Q9Y6N8 788 aa4.33□□□□□ -1.72
SMG1-207ENST00000563235 TTC24A2A3L6 582 aaPredicted RBP4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms