RNA–Protein interactions for RNA: ENST00000561381.5

USP3-220, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 2

Gene USP3, Length 979 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-220ENST00000561381 HS6ST2Q96MM7 605 aa10.24□□□□□ -0.77
USP3-220ENST00000561381 INPP5KQ9BT40 448 aa10.24□□□□□ -0.77
USP3-220ENST00000561381 TMEM109Q9BVC6 243 aa10.24□□□□□ -0.77
USP3-220ENST00000561381 C1QTNF6Q9BXI9 259 aa10.24□□□□□ -0.77
USP3-220ENST00000561381 ALG2Q9H553 416 aa10.24□□□□□ -0.77
USP3-220ENST00000561381 POLE3Q9NRF9 147 aa10.24□□□□□ -0.77
USP3-220ENST00000561381 PNPOQ9NVS9 261 aa10.24□□□□□ -0.77
USP3-220ENST00000561381 EMC3Q9P0I2 261 aa10.24□□□□□ -0.77
USP3-220ENST00000561381 MARCOQ9UEW3 520 aaPredicted RBP10.24□□□□□ -0.77
USP3-220ENST00000561381 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.24□□□□□ -0.77
USP3-220ENST00000561381 RAP2CQ9Y3L5 183 aa10.24□□□□□ -0.77
USP3-220ENST00000561381 SLC25A15Q9Y619 301 aa10.24□□□□□ -0.77
USP3-220ENST00000561381 V9GYY5 206 aaPredicted RBP10.24□□□□□ -0.77
USP3-220ENST00000561381 GOLGA8QA0A0J9YX86 632 aa10.23□□□□□ -0.77
USP3-220ENST00000561381 CIB4A0PJX0 185 aa10.23□□□□□ -0.77
USP3-220ENST00000561381 TMEM72A0PK05 275 aa10.23□□□□□ -0.77
USP3-220ENST00000561381 ZC3H12DA2A288 527 aaKnown RBP10.23□□□□□ -0.77
USP3-220ENST00000561381 GOLGA8OA6NCC3 632 aa10.23□□□□□ -0.77
USP3-220ENST00000561381 CCT8L1PA6NM43 557 aa10.23□□□□□ -0.77
USP3-220ENST00000561381 E9PBE3 544 aa10.23□□□□□ -0.77
USP3-220ENST00000561381 GOLGA8NF8WBI6 632 aa10.23□□□□□ -0.77
USP3-220ENST00000561381 HMGN4O00479 90 aa10.23□□□□□ -0.77
USP3-220ENST00000561381 SSX4O60224 188 aa10.23□□□□□ -0.77
USP3-220ENST00000561381 AGR2O95994 175 aa10.23□□□□□ -0.77
USP3-220ENST00000561381 CHRM4P08173 479 aa10.23□□□□□ -0.77
USP3-220ENST00000561381 GUSBP08236 651 aa10.23□□□□□ -0.77
USP3-220ENST00000561381 ITGA5P08648 1049 aa10.23□□□□□ -0.77
USP3-220ENST00000561381 DHRS4L1P0CG22 281 aa10.23□□□□□ -0.77
USP3-220ENST00000561381 IMPDH2P12268 514 aa10.23□□□□□ -0.77
USP3-220ENST00000561381 LBPP18428 481 aa10.23□□□□□ -0.77
USP3-220ENST00000561381 BGNP21810 368 aa10.23□□□□□ -0.77
USP3-220ENST00000561381 IL12AP29459 219 aa10.23□□□□□ -0.77
USP3-220ENST00000561381 CDKN2CP42773 168 aa10.23□□□□□ -0.77
USP3-220ENST00000561381 SLC1A6P48664 564 aa10.23□□□□□ -0.77
USP3-220ENST00000561381 UFM1P61960 85 aa10.23□□□□□ -0.77
USP3-220ENST00000561381 SYPL1Q16563 259 aa10.23□□□□□ -0.77
USP3-220ENST00000561381 ANXA8L1Q5VT79 327 aa10.23□□□□□ -0.77
USP3-220ENST00000561381 C9orf135Q5VTT2 229 aa10.23□□□□□ -0.77
USP3-220ENST00000561381 CXXC5Q7LFL8 322 aaKnown RBP10.23□□□□□ -0.77
USP3-220ENST00000561381 VPS37AQ8NEZ2 397 aa10.23□□□□□ -0.77
USP3-220ENST00000561381 PIGXQ8TBF5 258 aa10.23□□□□□ -0.77
USP3-220ENST00000561381 ZHX1-C8orf76Q96EF9 292 aa10.23□□□□□ -0.77
USP3-220ENST00000561381 CACNG6Q9BXT2 260 aa10.23□□□□□ -0.77
USP3-220ENST00000561381 SLC38A1Q9H2H9 487 aa10.23□□□□□ -0.77
USP3-220ENST00000561381 EXOSC3Q9NQT5 275 aaKnown RBP10.23□□□□□ -0.77
USP3-220ENST00000561381 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.23□□□□□ -0.77
USP3-220ENST00000561381 ASB6Q9NWX5 421 aa10.23□□□□□ -0.77
USP3-220ENST00000561381 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.23□□□□□ -0.77
USP3-220ENST00000561381 HDGFL3Q9Y3E1 203 aa10.23□□□□□ -0.77
USP3-220ENST00000561381 SPIN1Q9Y657 262 aaPredicted RBP10.23□□□□□ -0.77
USP3-220ENST00000561381 FBN1P35555 2871 aaKnown RBP10.22□□□□□ -0.77
USP3-220ENST00000561381 IGHV4-30-2A0A087WSY4 118 aa10.22□□□□□ -0.77
USP3-220ENST00000561381 TMED7-TICAM2A0A0A6YYA0 188 aa10.22□□□□□ -0.77
USP3-220ENST00000561381 CCDC154A6NI56 674 aa10.22□□□□□ -0.77
USP3-220ENST00000561381 AGAP5A6NIR3 686 aa10.22□□□□□ -0.77
USP3-220ENST00000561381 M0R1B8 84 aa10.22□□□□□ -0.77
USP3-220ENST00000561381 BIRC5O15392 142 aa10.22□□□□□ -0.77
USP3-220ENST00000561381 RGS16O15492 202 aaPredicted RBP10.22□□□□□ -0.77
USP3-220ENST00000561381 GPRIN2O60269 458 aa10.22□□□□□ -0.77
USP3-220ENST00000561381 MRPL33O75394 65 aaKnown RBP10.22□□□□□ -0.77
USP3-220ENST00000561381 TP53P04637 393 aaPredicted RBP10.22□□□□□ -0.77
USP3-220ENST00000561381 ALDOCP09972 364 aaKnown RBP10.22□□□□□ -0.77
USP3-220ENST00000561381 CD40P25942 277 aa10.22□□□□□ -0.77
USP3-220ENST00000561381 S100A3P33764 101 aa10.22□□□□□ -0.77
USP3-220ENST00000561381 TTKP33981 857 aa10.22□□□□□ -0.77
USP3-220ENST00000561381 SLC16A1P53985 500 aa10.22□□□□□ -0.77
USP3-220ENST00000561381 CLNS1AP54105 237 aaKnown RBP10.22□□□□□ -0.77
USP3-220ENST00000561381 HPCAP84074 193 aa10.22□□□□□ -0.77
USP3-220ENST00000561381 H3F3AP84243 136 aa10.22□□□□□ -0.77
USP3-220ENST00000561381 GABRA6Q16445 453 aa10.22□□□□□ -0.77
USP3-220ENST00000561381 COX20Q5RI15 118 aa10.22□□□□□ -0.77
USP3-220ENST00000561381 AGAP6Q5VW22 663 aa10.22□□□□□ -0.77
USP3-220ENST00000561381 C11orf71Q6IPW1 123 aa10.22□□□□□ -0.77
USP3-220ENST00000561381 WDR93Q6P2C0 686 aa10.22□□□□□ -0.77
USP3-220ENST00000561381 SLC22A25Q6T423 547 aa10.22□□□□□ -0.77
USP3-220ENST00000561381 TMEM108Q6UXF1 575 aa10.22□□□□□ -0.77
USP3-220ENST00000561381 CASP12Q6UXS9 341 aa10.22□□□□□ -0.77
USP3-220ENST00000561381 WDR31Q8NA23 367 aa10.22□□□□□ -0.77
USP3-220ENST00000561381 OIT3Q8WWZ8 545 aa10.22□□□□□ -0.77
USP3-220ENST00000561381 CCDC115Q96NT0 180 aa10.22□□□□□ -0.77
USP3-220ENST00000561381 MUS81Q96NY9 551 aa10.22□□□□□ -0.77
USP3-220ENST00000561381 GRIP2Q9C0E4 1043 aa10.22□□□□□ -0.77
USP3-220ENST00000561381 MEAF6Q9HAF1 191 aa10.22□□□□□ -0.77
USP3-220ENST00000561381 YAE1D1Q9NRH1 226 aa10.22□□□□□ -0.77
USP3-220ENST00000561381 FAIMQ9NVQ4 179 aa10.22□□□□□ -0.77
USP3-220ENST00000561381 TAS2R16Q9NYV7 291 aa10.22□□□□□ -0.77
USP3-220ENST00000561381 TMEM181Q9P2C4 612 aa10.22□□□□□ -0.77
USP3-220ENST00000561381 MALT1Q9UDY8 824 aa10.22□□□□□ -0.77
USP3-220ENST00000561381 HAO1Q9UJM8 370 aa10.22□□□□□ -0.77
USP3-220ENST00000561381 OSGIN1Q9UJX0 560 aa10.22□□□□□ -0.77
USP3-220ENST00000561381 POU2F3Q9UKI9 436 aa10.22□□□□□ -0.77
USP3-220ENST00000561381 TMED7Q9Y3B3 224 aa10.22□□□□□ -0.77
USP3-220ENST00000561381 HEATR1Q9H583 2144 aaKnown RBP10.22□□□□□ -0.77
USP3-220ENST00000561381 A0A096LNT2 108 aa10.21□□□□□ -0.77
USP3-220ENST00000561381 PDLIM1O00151 329 aa10.21□□□□□ -0.77
USP3-220ENST00000561381 SDHDO14521 159 aa10.21□□□□□ -0.77
USP3-220ENST00000561381 GPR171O14626 319 aa10.21□□□□□ -0.77
USP3-220ENST00000561381 DNPH1O43598 174 aa10.21□□□□□ -0.77
USP3-220ENST00000561381 CD5LO43866 347 aa10.21□□□□□ -0.77
USP3-220ENST00000561381 GSNP06396 782 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms