RNA–Protein interactions for RNA: ENST00000561026.5

SNX1-213, Transcript of sorting nexin 1, humanhuman

TSL 1 (best) BASIC

Gene SNX1, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-213ENST00000561026 PMM1Q92871 262 aa14.3□□□□□ -0.12
SNX1-213ENST00000561026 GRIP2Q9C0E4 1043 aa14.3□□□□□ -0.12
SNX1-213ENST00000561026 WDR55Q9H6Y2 383 aaPredicted RBP14.3□□□□□ -0.12
SNX1-213ENST00000561026 THAP1Q9NVV9 213 aa14.3□□□□□ -0.12
SNX1-213ENST00000561026 ASB6Q9NWX5 421 aa14.3□□□□□ -0.12
SNX1-213ENST00000561026 OSGIN1Q9UJX0 560 aa14.3□□□□□ -0.12
SNX1-213ENST00000561026 DNHD1Q96M86 4753 aa14.3□□□□□ -0.12
SNX1-213ENST00000561026 TMED7-TICAM2A0A0A6YYA0 188 aa14.29□□□□□ -0.12
SNX1-213ENST00000561026 CIB4A0PJX0 185 aa14.29□□□□□ -0.12
SNX1-213ENST00000561026 TRPC5OSA6NMA1 111 aa14.29□□□□□ -0.12
SNX1-213ENST00000561026 FAAHO00519 579 aa14.29□□□□□ -0.12
SNX1-213ENST00000561026 ABCD4O14678 606 aa14.29□□□□□ -0.12
SNX1-213ENST00000561026 ZNF208O43345 1280 aa14.29□□□□□ -0.12
SNX1-213ENST00000561026 SNNO75324 88 aaPredicted RBP14.29□□□□□ -0.12
SNX1-213ENST00000561026 MRPL33O75394 65 aaKnown RBP14.29□□□□□ -0.12
SNX1-213ENST00000561026 RAD51DO75771 328 aa14.29□□□□□ -0.12
SNX1-213ENST00000561026 GSNP06396 782 aa14.29□□□□□ -0.12
SNX1-213ENST00000561026 THBS1P07996 1170 aa14.29□□□□□ -0.12
SNX1-213ENST00000561026 NR2F1P10589 423 aa14.29□□□□□ -0.12
SNX1-213ENST00000561026 IL7RP16871 459 aa14.29□□□□□ -0.12
SNX1-213ENST00000561026 RPS4Y1P22090 263 aaKnown RBP14.29□□□□□ -0.12
SNX1-213ENST00000561026 SLC1A3P43003 542 aa14.29□□□□□ -0.12
SNX1-213ENST00000561026 MAGEA8P43361 318 aa14.29□□□□□ -0.12
SNX1-213ENST00000561026 POLR2HP52434 150 aaKnown RBP14.29□□□□□ -0.12
SNX1-213ENST00000561026 MAP2K6P52564 334 aa14.29□□□□□ -0.12
SNX1-213ENST00000561026 FAPQ12884 760 aa14.29□□□□□ -0.12
SNX1-213ENST00000561026 GNA13Q14344 377 aa14.29□□□□□ -0.12
SNX1-213ENST00000561026 COX20Q5RI15 118 aa14.29□□□□□ -0.12
SNX1-213ENST00000561026 GLB1L3Q8NCI6 653 aaPredicted RBP14.29□□□□□ -0.12
SNX1-213ENST00000561026 PNPT1Q8TCS8 783 aaKnown RBP14.29□□□□□ -0.12
SNX1-213ENST00000561026 DDIT4LQ96D03 193 aa14.29□□□□□ -0.12
SNX1-213ENST00000561026 RADILQ96JH8 1075 aa14.29□□□□□ -0.12
SNX1-213ENST00000561026 ZBTB18Q99592 522 aa14.29□□□□□ -0.12
SNX1-213ENST00000561026 TAS2R16Q9NYV7 291 aa14.29□□□□□ -0.12
SNX1-213ENST00000561026 MALT1Q9UDY8 824 aa14.29□□□□□ -0.12
SNX1-213ENST00000561026 TMED7Q9Y3B3 224 aa14.29□□□□□ -0.12
SNX1-213ENST00000561026 TMEM120BA0PK00 339 aa14.28□□□□□ -0.12
SNX1-213ENST00000561026 TMEM72A0PK05 275 aa14.28□□□□□ -0.12
SNX1-213ENST00000561026 CFAP73A6NFT4 308 aa14.28□□□□□ -0.12
SNX1-213ENST00000561026 CCT8L1PA6NM43 557 aa14.28□□□□□ -0.12
SNX1-213ENST00000561026 RNF223E7ERA6 249 aa14.28□□□□□ -0.12
SNX1-213ENST00000561026 EIF1BO60739 113 aaKnown RBP14.28□□□□□ -0.12
SNX1-213ENST00000561026 DBIP07108 87 aaKnown RBP14.28□□□□□ -0.12
SNX1-213ENST00000561026 TACR3P29371 465 aa14.28□□□□□ -0.12
SNX1-213ENST00000561026 SLC35A1P78382 337 aa14.28□□□□□ -0.12
SNX1-213ENST00000561026 MRPL2Q5T653 305 aaKnown RBP14.28□□□□□ -0.12
SNX1-213ENST00000561026 TMEM108Q6UXF1 575 aa14.28□□□□□ -0.12
SNX1-213ENST00000561026 DTX2Q86UW9 622 aa14.28□□□□□ -0.12
SNX1-213ENST00000561026 OR52N5Q8NH56 324 aa14.28□□□□□ -0.12
SNX1-213ENST00000561026 WDR60Q8WVS4 1066 aa14.28□□□□□ -0.12
SNX1-213ENST00000561026 MUS81Q96NY9 551 aa14.28□□□□□ -0.12
SNX1-213ENST00000561026 TRAF4Q9BUZ4 470 aaPredicted RBP14.28□□□□□ -0.12
SNX1-213ENST00000561026 SLCO5A1Q9H2Y9 848 aa14.28□□□□□ -0.12
SNX1-213ENST00000561026 ALG2Q9H553 416 aa14.28□□□□□ -0.12
SNX1-213ENST00000561026 FAIMQ9NVQ4 179 aa14.28□□□□□ -0.12
SNX1-213ENST00000561026 SLC25A15Q9Y619 301 aa14.28□□□□□ -0.12
SNX1-213ENST00000561026 RFXANKO14593 260 aa14.27□□□□□ -0.12
SNX1-213ENST00000561026 ZNF500O60304 480 aaPredicted RBP14.27□□□□□ -0.12
SNX1-213ENST00000561026 KRT75O95678 551 aa14.27□□□□□ -0.12
SNX1-213ENST00000561026 IGHV4-39P01824 125 aa14.27□□□□□ -0.12
SNX1-213ENST00000561026 IL6P05231 212 aa14.27□□□□□ -0.12
SNX1-213ENST00000561026 KITP10721 976 aa14.27□□□□□ -0.12
SNX1-213ENST00000561026 IMPDH2P12268 514 aa14.27□□□□□ -0.12
SNX1-213ENST00000561026 ACVR1BP36896 505 aa14.27□□□□□ -0.12
SNX1-213ENST00000561026 CDH11P55287 796 aa14.27□□□□□ -0.12
SNX1-213ENST00000561026 KRTAP1-1Q07627 177 aa14.27□□□□□ -0.12
SNX1-213ENST00000561026 EPS8Q12929 822 aa14.27□□□□□ -0.12
SNX1-213ENST00000561026 MAPK11Q15759 364 aa14.27□□□□□ -0.12
SNX1-213ENST00000561026 OR7E24Q6IFN5 339 aa14.27□□□□□ -0.12
SNX1-213ENST00000561026 PEX5LQ8IYB4 626 aa14.27□□□□□ -0.12
SNX1-213ENST00000561026 NAA11Q9BSU3 229 aaPredicted RBP14.27□□□□□ -0.12
SNX1-213ENST00000561026 REG4Q9BYZ8 158 aa14.27□□□□□ -0.12
SNX1-213ENST00000561026 ADAM19Q9H013 955 aa14.27□□□□□ -0.12
SNX1-213ENST00000561026 SLC6A13Q9NSD5 602 aa14.27□□□□□ -0.12
SNX1-213ENST00000561026 RLIMQ9NVW2 624 aa14.27□□□□□ -0.12
SNX1-213ENST00000561026 PARPBPQ9NWS1 579 aa14.27□□□□□ -0.12
SNX1-213ENST00000561026 MGAT4BQ9UQ53 548 aa14.27□□□□□ -0.12
SNX1-213ENST00000561026 FLVCR1Q9Y5Y0 555 aa14.27□□□□□ -0.12
SNX1-213ENST00000561026 SONP18583 2426 aaKnown RBP14.27□□□□□ -0.13
SNX1-213ENST00000561026 PLCE1Q9P212 2302 aa14.27□□□□□ -0.13
SNX1-213ENST00000561026 ZC3H12DA2A288 527 aaKnown RBP14.26□□□□□ -0.13
SNX1-213ENST00000561026 CDHR4A6H8M9 788 aa14.26□□□□□ -0.13
SNX1-213ENST00000561026 SLCO1B7G3V0H7 640 aa14.26□□□□□ -0.13
SNX1-213ENST00000561026 PDLIM1O00151 329 aa14.26□□□□□ -0.13
SNX1-213ENST00000561026 NDUFS7O75251 213 aa14.26□□□□□ -0.13
SNX1-213ENST00000561026 SLC22A3O75751 556 aa14.26□□□□□ -0.13
SNX1-213ENST00000561026 ITGA5P08648 1049 aa14.26□□□□□ -0.13
SNX1-213ENST00000561026 IDO1P14902 403 aa14.26□□□□□ -0.13
SNX1-213ENST00000561026 UQCRBP14927 111 aa14.26□□□□□ -0.13
SNX1-213ENST00000561026 PTAFRP25105 342 aa14.26□□□□□ -0.13
SNX1-213ENST00000561026 ZNF83P51522 516 aa14.26□□□□□ -0.13
SNX1-213ENST00000561026 MVDP53602 400 aa14.26□□□□□ -0.13
SNX1-213ENST00000561026 SLC18A1P54219 525 aa14.26□□□□□ -0.13
SNX1-213ENST00000561026 FOXG1P55316 489 aaPredicted RBP14.26□□□□□ -0.13
SNX1-213ENST00000561026 SLC17A1Q14916 467 aa14.26□□□□□ -0.13
SNX1-213ENST00000561026 GABRA6Q16445 453 aa14.26□□□□□ -0.13
SNX1-213ENST00000561026 GSTA3Q16772 222 aa14.26□□□□□ -0.13
SNX1-213ENST00000561026 PDCD4Q53EL6 469 aaKnown RBP14.26□□□□□ -0.13
SNX1-213ENST00000561026 PAQR6Q6TCH4 344 aa14.26□□□□□ -0.13
SNX1-213ENST00000561026 KLHL17Q6TDP4 642 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms