RNA–Protein interactions for RNA: ENST00000560754.1

RNF31-223, Transcript of ring finger protein 31, human

TSL 3

Gene RNF31, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNF31-223	ENST00000560754	KLHL17	Q6TDP4	642 aa		11.99	□□□□□ -0.49
RNF31-223	ENST00000560754	ANKRD46	Q86W74	232 aa		11.99	□□□□□ -0.49
RNF31-223	ENST00000560754	CMIP	Q8IY22	773 aa		11.99	□□□□□ -0.49
RNF31-223	ENST00000560754	UBE2J2	Q8N2K1	259 aa		11.99	□□□□□ -0.49
RNF31-223	ENST00000560754	ARFGAP2	Q8N6H7	521 aa		11.99	□□□□□ -0.49
RNF31-223	ENST00000560754	AEN	Q8WTP8	325 aa	Known RBP	11.99	□□□□□ -0.49
RNF31-223	ENST00000560754	CNOT9	Q92600	299 aa	Known RBP	11.99	□□□□□ -0.49
RNF31-223	ENST00000560754	BOD1	Q96IK1	185 aa		11.99	□□□□□ -0.49
RNF31-223	ENST00000560754	ADAD1	Q96M93	576 aa	Known RBP	11.99	□□□□□ -0.49
RNF31-223	ENST00000560754	TRNT1	Q96Q11	434 aa	Known RBP	11.99	□□□□□ -0.49
RNF31-223	ENST00000560754	SORT1	Q99523	831 aa		11.99	□□□□□ -0.49
RNF31-223	ENST00000560754	OR11A1	Q9GZK7	315 aa		11.99	□□□□□ -0.49
RNF31-223	ENST00000560754	MTHFD2L	Q9H903	347 aa	Predicted RBP	11.99	□□□□□ -0.49
RNF31-223	ENST00000560754	YAE1D1	Q9NRH1	226 aa		11.99	□□□□□ -0.49
RNF31-223	ENST00000560754	BTNL2	Q9UIR0	455 aa		11.99	□□□□□ -0.49
RNF31-223	ENST00000560754	RAP2C	Q9Y3L5	183 aa		11.99	□□□□□ -0.49
RNF31-223	ENST00000560754	ANK3	Q12955	4377 aa	Known RBP	11.99	□□□□□ -0.49
RNF31-223	ENST00000560754	IGHV4-30-2	A0A087WSY4	118 aa		11.98	□□□□□ -0.49
RNF31-223	ENST00000560754	AGAP5	A6NIR3	686 aa		11.98	□□□□□ -0.49
RNF31-223	ENST00000560754	CCT8L1P	A6NM43	557 aa		11.98	□□□□□ -0.49
RNF31-223	ENST00000560754	CLDN24	A6NM45	220 aa		11.98	□□□□□ -0.49
RNF31-223	ENST00000560754		A8MV72	311 aa	Predicted RBP	11.98	□□□□□ -0.49
RNF31-223	ENST00000560754	EIF1B	O60739	113 aa	Known RBP	11.98	□□□□□ -0.49
RNF31-223	ENST00000560754	C1QC	P02747	245 aa		11.98	□□□□□ -0.49
RNF31-223	ENST00000560754	ITGA5	P08648	1049 aa		11.98	□□□□□ -0.49
RNF31-223	ENST00000560754	DHRS4L1	P0CG22	281 aa		11.98	□□□□□ -0.49
RNF31-223	ENST00000560754	IMPDH2	P12268	514 aa		11.98	□□□□□ -0.49
RNF31-223	ENST00000560754	ZNF83	P51522	516 aa		11.98	□□□□□ -0.49
RNF31-223	ENST00000560754	SLC35A1	P78382	337 aa		11.98	□□□□□ -0.49
RNF31-223	ENST00000560754	LOXL1	Q08397	574 aa	Predicted RBP	11.98	□□□□□ -0.49
RNF31-223	ENST00000560754	SLC17A1	Q14916	467 aa		11.98	□□□□□ -0.49
RNF31-223	ENST00000560754	RAB35	Q15286	201 aa		11.98	□□□□□ -0.49
RNF31-223	ENST00000560754	DPY19L1	Q2PZI1	675 aa		11.98	□□□□□ -0.49
RNF31-223	ENST00000560754	ZNF544	Q6NX49	715 aa		11.98	□□□□□ -0.49
RNF31-223	ENST00000560754	TNFAIP8L2	Q6P589	184 aa	Predicted RBP	11.98	□□□□□ -0.49
RNF31-223	ENST00000560754	SLC22A25	Q6T423	547 aa		11.98	□□□□□ -0.49
RNF31-223	ENST00000560754	PIAS4	Q8N2W9	510 aa	Predicted RBP	11.98	□□□□□ -0.49
RNF31-223	ENST00000560754	MUC15	Q8N387	334 aa		11.98	□□□□□ -0.49
RNF31-223	ENST00000560754	OR52N5	Q8NH56	324 aa		11.98	□□□□□ -0.49
RNF31-223	ENST00000560754	CCDC115	Q96NT0	180 aa		11.98	□□□□□ -0.49
RNF31-223	ENST00000560754	TNFRSF13C	Q96RJ3	184 aa		11.98	□□□□□ -0.49
RNF31-223	ENST00000560754	INPP5K	Q9BT40	448 aa		11.98	□□□□□ -0.49
RNF31-223	ENST00000560754	CACNG6	Q9BXT2	260 aa		11.98	□□□□□ -0.49
RNF31-223	ENST00000560754	ADAM19	Q9H013	955 aa		11.98	□□□□□ -0.49
RNF31-223	ENST00000560754	SLC38A1	Q9H2H9	487 aa		11.98	□□□□□ -0.49
RNF31-223	ENST00000560754	SSU72	Q9NP77	194 aa	Known RBP	11.98	□□□□□ -0.49
RNF31-223	ENST00000560754	DCTN4	Q9UJW0	460 aa		11.98	□□□□□ -0.49
RNF31-223	ENST00000560754	OSGIN1	Q9UJX0	560 aa		11.98	□□□□□ -0.49
RNF31-223	ENST00000560754	FLVCR1	Q9Y5Y0	555 aa		11.98	□□□□□ -0.49
RNF31-223	ENST00000560754	TMED7-TICAM2	A0A0A6YYA0	188 aa		11.97	□□□□□ -0.49
RNF31-223	ENST00000560754	FAM234B	A2RU67	622 aa		11.97	□□□□□ -0.49
RNF31-223	ENST00000560754	WDR91	A4D1P6	747 aa		11.97	□□□□□ -0.49
RNF31-223	ENST00000560754		H7C417	338 aa		11.97	□□□□□ -0.49
RNF31-223	ENST00000560754	IFNA2	P01563	188 aa		11.97	□□□□□ -0.49
RNF31-223	ENST00000560754	LBP	P18428	481 aa		11.97	□□□□□ -0.49
RNF31-223	ENST00000560754	SLC1A3	P43003	542 aa		11.97	□□□□□ -0.49
RNF31-223	ENST00000560754	KHK	P50053	298 aa		11.97	□□□□□ -0.49
RNF31-223	ENST00000560754	CLNS1A	P54105	237 aa	Known RBP	11.97	□□□□□ -0.49
RNF31-223	ENST00000560754	OR2B6	P58173	313 aa		11.97	□□□□□ -0.49
RNF31-223	ENST00000560754	TXNL4A	P83876	142 aa	Known RBP	11.97	□□□□□ -0.49
RNF31-223	ENST00000560754	CHI3L2	Q15782	390 aa		11.97	□□□□□ -0.49
RNF31-223	ENST00000560754	PDCD2	Q16342	344 aa	Predicted RBP	11.97	□□□□□ -0.49
RNF31-223	ENST00000560754	SYPL1	Q16563	259 aa		11.97	□□□□□ -0.49
RNF31-223	ENST00000560754	GPAT3	Q53EU6	434 aa		11.97	□□□□□ -0.49
RNF31-223	ENST00000560754	SPANXN4	Q5MJ08	99 aa		11.97	□□□□□ -0.49
RNF31-223	ENST00000560754	OGFOD2	Q6N063	350 aa		11.97	□□□□□ -0.49
RNF31-223	ENST00000560754	LRRC74B	Q6ZQY2	392 aa		11.97	□□□□□ -0.49
RNF31-223	ENST00000560754	FBXL14	Q8N1E6	418 aa		11.97	□□□□□ -0.49
RNF31-223	ENST00000560754	DEPDC4	Q8N2C3	294 aa		11.97	□□□□□ -0.49
RNF31-223	ENST00000560754	ZIC4	Q8N9L1	334 aa		11.97	□□□□□ -0.49
RNF31-223	ENST00000560754	C1orf162	Q8NEQ5	155 aa	Predicted RBP	11.97	□□□□□ -0.49
RNF31-223	ENST00000560754	TEX37	Q96LM6	180 aa		11.97	□□□□□ -0.49
RNF31-223	ENST00000560754	PPP1R36	Q96LQ0	422 aa		11.97	□□□□□ -0.49
RNF31-223	ENST00000560754	SLC35A5	Q9BS91	424 aa		11.97	□□□□□ -0.49
RNF31-223	ENST00000560754	PIF1	Q9H611	641 aa		11.97	□□□□□ -0.49
RNF31-223	ENST00000560754	SLC7A10	Q9NS82	523 aa		11.97	□□□□□ -0.49
RNF31-223	ENST00000560754	MARCO	Q9UEW3	520 aa	Predicted RBP	11.97	□□□□□ -0.49
RNF31-223	ENST00000560754	TMED7	Q9Y3B3	224 aa		11.97	□□□□□ -0.49
RNF31-223	ENST00000560754	PRPF8	Q6P2Q9	2335 aa	Known RBP eCLIP	11.97	□□□□□ -0.49	1e-10	■■■■□ 20.8
RNF31-223	ENST00000560754		A0A1W2PR80	420 aa		11.96	□□□□□ -0.49
RNF31-223	ENST00000560754	TMEM72	A0PK05	275 aa		11.96	□□□□□ -0.49
RNF31-223	ENST00000560754	CCDC154	A6NI56	674 aa		11.96	□□□□□ -0.49
RNF31-223	ENST00000560754	AP3D1	O14617	1153 aa		11.96	□□□□□ -0.49
RNF31-223	ENST00000560754	RPS4Y1	P22090	263 aa	Known RBP	11.96	□□□□□ -0.49
RNF31-223	ENST00000560754	TACR3	P29371	465 aa		11.96	□□□□□ -0.49
RNF31-223	ENST00000560754	APOBEC3A	P31941	199 aa	Predicted RBP	11.96	□□□□□ -0.49
RNF31-223	ENST00000560754	S100A3	P33764	101 aa		11.96	□□□□□ -0.49
RNF31-223	ENST00000560754	SLC1A6	P48664	564 aa		11.96	□□□□□ -0.49
RNF31-223	ENST00000560754	FABP6	P51161	128 aa		11.96	□□□□□ -0.49
RNF31-223	ENST00000560754	POLR2H	P52434	150 aa	Known RBP	11.96	□□□□□ -0.49
RNF31-223	ENST00000560754	NUDT6	P53370	316 aa		11.96	□□□□□ -0.49
RNF31-223	ENST00000560754	VLDLR	P98155	873 aa		11.96	□□□□□ -0.49
RNF31-223	ENST00000560754	SPOCK1	Q08629	439 aa		11.96	□□□□□ -0.49
RNF31-223	ENST00000560754	MPP2	Q14168	576 aa		11.96	□□□□□ -0.49
RNF31-223	ENST00000560754	GSTA3	Q16772	222 aa		11.96	□□□□□ -0.49
RNF31-223	ENST00000560754	TMEM249	Q2WGJ8	235 aa		11.96	□□□□□ -0.49
RNF31-223	ENST00000560754	FAM174B	Q3ZCQ3	159 aa		11.96	□□□□□ -0.49
RNF31-223	ENST00000560754	CHRFAM7A	Q494W8	412 aa		11.96	□□□□□ -0.49
RNF31-223	ENST00000560754	TSPO2	Q5TGU0	170 aa		11.96	□□□□□ -0.49
RNF31-223	ENST00000560754	WDR93	Q6P2C0	686 aa		11.96	□□□□□ -0.49

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