RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 POC1BQ8TC44 478 aa12.54□□□□□ -0.4
TRAF3-208ENST00000560371 PCDHGA8Q9Y5G5 932 aa12.54□□□□□ -0.4
TRAF3-208ENST00000560371 ACACAQ13085 2346 aa12.54□□□□□ -0.4
TRAF3-208ENST00000560371 A0A0A6YYH2 397 aa12.54□□□□□ -0.4
TRAF3-208ENST00000560371 A6NJ64 397 aa12.54□□□□□ -0.4
TRAF3-208ENST00000560371 B4DXG7 233 aa12.54□□□□□ -0.4
TRAF3-208ENST00000560371 TIMM8AO60220 97 aaPredicted RBP12.54□□□□□ -0.4
TRAF3-208ENST00000560371 MTHFD2P13995 350 aa12.54□□□□□ -0.4
TRAF3-208ENST00000560371 EFNA3P52797 238 aa12.54□□□□□ -0.4
TRAF3-208ENST00000560371 MS4A2Q01362 244 aa12.54□□□□□ -0.4
TRAF3-208ENST00000560371 KEAP1Q14145 624 aa12.54□□□□□ -0.4
TRAF3-208ENST00000560371 SLCO4C1Q6ZQN7 724 aa12.54□□□□□ -0.4
TRAF3-208ENST00000560371 CLEC14AQ86T13 490 aa12.54□□□□□ -0.4
TRAF3-208ENST00000560371 SGPP2Q8IWX5 399 aa12.54□□□□□ -0.4
TRAF3-208ENST00000560371 TBX21Q9UL17 535 aa12.54□□□□□ -0.4
TRAF3-208ENST00000560371 GLI3P10071 1580 aa12.54□□□□□ -0.4
TRAF3-208ENST00000560371 PSMB10P40306 273 aa12.54□□□□□ -0.4
TRAF3-208ENST00000560371 EIF1P41567 113 aaKnown RBP12.54□□□□□ -0.4
TRAF3-208ENST00000560371 PCGF3Q3KNV8 242 aa12.54□□□□□ -0.4
TRAF3-208ENST00000560371 GGTA1PQ4G0N0 100 aa12.54□□□□□ -0.4
TRAF3-208ENST00000560371 C18orf63Q68DL7 685 aa12.54□□□□□ -0.4
TRAF3-208ENST00000560371 WFDC5Q8TCV5 224 aa12.54□□□□□ -0.4
TRAF3-208ENST00000560371 ITFG2Q969R8 447 aa12.54□□□□□ -0.4
TRAF3-208ENST00000560371 NT5C3BQ969T7 300 aa12.54□□□□□ -0.4
TRAF3-208ENST00000560371 PHB2Q99623 299 aa12.54□□□□□ -0.4
TRAF3-208ENST00000560371 WASH6PQ9NQA3 447 aa12.54□□□□□ -0.4
TRAF3-208ENST00000560371 GNG13Q9P2W3 67 aa12.54□□□□□ -0.4
TRAF3-208ENST00000560371 LOC105369274A0A096LPK9 316 aa12.54□□□□□ -0.4
TRAF3-208ENST00000560371 OR4N4Q8N0Y3 316 aa12.54□□□□□ -0.4
TRAF3-208ENST00000560371 OR1E3Q8WZA6 343 aa12.54□□□□□ -0.4
TRAF3-208ENST00000560371 DDX31Q9H8H2 851 aaKnown RBP12.54□□□□□ -0.4
TRAF3-208ENST00000560371 I3L521 148 aa12.53□□□□□ -0.4
TRAF3-208ENST00000560371 DNAJB6O75190 326 aa12.53□□□□□ -0.4
TRAF3-208ENST00000560371 MED25Q71SY5 747 aa12.53□□□□□ -0.4
TRAF3-208ENST00000560371 OR1J2Q8NGS2 313 aa12.53□□□□□ -0.4
TRAF3-208ENST00000560371 PIGQQ9BRB3 760 aa12.53□□□□□ -0.4
TRAF3-208ENST00000560371 SLC19A3Q9BZV2 496 aa12.53□□□□□ -0.4
TRAF3-208ENST00000560371 C6orf106Q9H6K1 298 aaPredicted RBP12.53□□□□□ -0.4
TRAF3-208ENST00000560371 APMAPQ9HDC9 416 aa12.53□□□□□ -0.4
TRAF3-208ENST00000560371 UTS2O95399 124 aa12.53□□□□□ -0.4
TRAF3-208ENST00000560371 AGTR1P30556 359 aa12.53□□□□□ -0.4
TRAF3-208ENST00000560371 CLDN17P56750 224 aa12.53□□□□□ -0.4
TRAF3-208ENST00000560371 SLC36A2Q495M3 483 aa12.53□□□□□ -0.4
TRAF3-208ENST00000560371 CCDC58Q4VC31 144 aa12.53□□□□□ -0.4
TRAF3-208ENST00000560371 C5orf46Q6UWT4 87 aa12.53□□□□□ -0.4
TRAF3-208ENST00000560371 B3GNT7Q8NFL0 401 aa12.53□□□□□ -0.4
TRAF3-208ENST00000560371 PSMF1Q92530 271 aa12.53□□□□□ -0.4
TRAF3-208ENST00000560371 DHRS4Q9BTZ2 278 aa12.53□□□□□ -0.4
TRAF3-208ENST00000560371 TEX10Q9NXF1 929 aaPredicted RBP12.53□□□□□ -0.4
TRAF3-208ENST00000560371 TAS2R3Q9NYW6 316 aa12.53□□□□□ -0.4
TRAF3-208ENST00000560371 A8MV72 311 aaPredicted RBP12.53□□□□□ -0.4
TRAF3-208ENST00000560371 ZNF740Q8NDX6 193 aa12.53□□□□□ -0.4
TRAF3-208ENST00000560371 SLC38A5Q8WUX1 472 aa12.53□□□□□ -0.4
TRAF3-208ENST00000560371 MRGPRX1Q96LB2 322 aa12.53□□□□□ -0.4
TRAF3-208ENST00000560371 KATNB1Q9BVA0 655 aa12.53□□□□□ -0.4
TRAF3-208ENST00000560371 EIF5A2Q9GZV4 153 aaKnown RBP12.53□□□□□ -0.4
TRAF3-208ENST00000560371 TMEM9BQ9NQ34 198 aa12.53□□□□□ -0.4
TRAF3-208ENST00000560371 AGPAT4Q9NRZ5 378 aa12.53□□□□□ -0.4
TRAF3-208ENST00000560371 OR14J1Q9UGF5 321 aa12.53□□□□□ -0.4
TRAF3-208ENST00000560371 PRDM4Q9UKN5 801 aa12.53□□□□□ -0.4
TRAF3-208ENST00000560371 NCS1P62166 190 aa12.53□□□□□ -0.4
TRAF3-208ENST00000560371 SLC16A9Q7RTY1 509 aa12.53□□□□□ -0.4
TRAF3-208ENST00000560371 ASB17Q8WXJ9 295 aa12.53□□□□□ -0.4
TRAF3-208ENST00000560371 MS4A8Q9BY19 250 aa12.53□□□□□ -0.4
TRAF3-208ENST00000560371 KIR3DX1Q9H7L2 352 aa12.53□□□□□ -0.4
TRAF3-208ENST00000560371 HIF1ANQ9NWT6 349 aa12.53□□□□□ -0.4
TRAF3-208ENST00000560371 PLEKHM1Q9Y4G2 1056 aa12.53□□□□□ -0.4
TRAF3-208ENST00000560371 ABCA1O95477 2261 aa12.53□□□□□ -0.4
TRAF3-208ENST00000560371 OTOFQ9HC10 1997 aa12.53□□□□□ -0.4
TRAF3-208ENST00000560371 K7ESM1 405 aa12.53□□□□□ -0.4
TRAF3-208ENST00000560371 MAOAP21397 527 aa12.53□□□□□ -0.4
TRAF3-208ENST00000560371 TACR3P29371 465 aa12.53□□□□□ -0.4
TRAF3-208ENST00000560371 VRK3Q8IV63 474 aa12.53□□□□□ -0.4
TRAF3-208ENST00000560371 CNOT11Q9UKZ1 510 aaKnown RBP12.53□□□□□ -0.4
TRAF3-208ENST00000560371 CACNA1DQ01668 2161 aa12.53□□□□□ -0.4
TRAF3-208ENST00000560371 POM121BA6NF01 834 aa12.53□□□□□ -0.4
TRAF3-208ENST00000560371 PRRT4C9JH25 899 aa12.53□□□□□ -0.4
TRAF3-208ENST00000560371 CBX7O95931 251 aa12.53□□□□□ -0.4
TRAF3-208ENST00000560371 LTB4RQ15722 352 aa12.53□□□□□ -0.4
TRAF3-208ENST00000560371 GPR19Q15760 415 aa12.53□□□□□ -0.4
TRAF3-208ENST00000560371 ACSM3Q53FZ2 586 aa12.53□□□□□ -0.4
TRAF3-208ENST00000560371 OR7E24Q6IFN5 339 aa12.53□□□□□ -0.4
TRAF3-208ENST00000560371 RNF113BQ8IZP6 322 aaKnown RBP12.53□□□□□ -0.4
TRAF3-208ENST00000560371 UBXN10Q96LJ8 280 aa12.53□□□□□ -0.4
TRAF3-208ENST00000560371 SPIN2AQ99865 258 aa12.53□□□□□ -0.4
TRAF3-208ENST00000560371 SPIN2BQ9BPZ2 258 aa12.53□□□□□ -0.4
TRAF3-208ENST00000560371 QRSL1Q9H0R6 528 aaKnown RBP12.53□□□□□ -0.4
TRAF3-208ENST00000560371 C2orf72A6NCS6 295 aa12.52□□□□□ -0.4
TRAF3-208ENST00000560371 H0Y8X5 98 aa12.52□□□□□ -0.4
TRAF3-208ENST00000560371 OR7A17O14581 309 aa12.52□□□□□ -0.4
TRAF3-208ENST00000560371 DENRO43583 198 aaKnown RBP12.52□□□□□ -0.4
TRAF3-208ENST00000560371 DNASE1P24855 282 aa12.52□□□□□ -0.4
TRAF3-208ENST00000560371 RAB40BQ12829 278 aa12.52□□□□□ -0.4
TRAF3-208ENST00000560371 HENMT1Q5T8I9 393 aaKnown RBP12.52□□□□□ -0.4
TRAF3-208ENST00000560371 LILRB2Q8N423 598 aa12.52□□□□□ -0.4
TRAF3-208ENST00000560371 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.52□□□□□ -0.4
TRAF3-208ENST00000560371 ZFP57Q9NU63 452 aa12.52□□□□□ -0.4
TRAF3-208ENST00000560371 COL18A1P39060 1754 aa12.52□□□□□ -0.4
TRAF3-208ENST00000560371 TMEM202A6NGA9 273 aa12.52□□□□□ -0.4
TRAF3-208ENST00000560371 SERINC4A6NH21 518 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 1297.2 ms