RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 PSD2Q9BQI7 771 aa13.31□□□□□ -0.28
SNRPA1-207ENST00000559309 SERINC1Q9NRX5 453 aa13.31□□□□□ -0.28
SNRPA1-207ENST00000559309 TRAPPC4Q9Y296 219 aa13.31□□□□□ -0.28
SNRPA1-207ENST00000559309 HDGFL3Q9Y3E1 203 aa13.31□□□□□ -0.28
SNRPA1-207ENST00000559309 AP4S1Q9Y587 144 aa13.31□□□□□ -0.28
SNRPA1-207ENST00000559309 SPIN1Q9Y657 262 aaPredicted RBP13.31□□□□□ -0.28
SNRPA1-207ENST00000559309 RELNP78509 3460 aa13.3□□□□□ -0.28
SNRPA1-207ENST00000559309 TRBV4-1A0A0J9YWV2 114 aa13.3□□□□□ -0.28
SNRPA1-207ENST00000559309 HTR3EA5X5Y0 456 aa13.3□□□□□ -0.28
SNRPA1-207ENST00000559309 H0YC42 278 aa13.3□□□□□ -0.28
SNRPA1-207ENST00000559309 PYCARD-AS1I3L0S3 204 aa13.3□□□□□ -0.28
SNRPA1-207ENST00000559309 BCKDKO14874 412 aa13.3□□□□□ -0.28
SNRPA1-207ENST00000559309 DNPH1O43598 174 aa13.3□□□□□ -0.28
SNRPA1-207ENST00000559309 KRT36O76013 467 aa13.3□□□□□ -0.28
SNRPA1-207ENST00000559309 MT-ND1P03886 318 aa13.3□□□□□ -0.28
SNRPA1-207ENST00000559309 H1F0P07305 194 aaKnown RBP13.3□□□□□ -0.28
SNRPA1-207ENST00000559309 IMPDH2P12268 514 aa13.3□□□□□ -0.28
SNRPA1-207ENST00000559309 CXCR1P25024 350 aa13.3□□□□□ -0.28
SNRPA1-207ENST00000559309 UGT2B15P54855 530 aa13.3□□□□□ -0.28
SNRPA1-207ENST00000559309 TPD52P55327 224 aaPredicted RBP13.3□□□□□ -0.28
SNRPA1-207ENST00000559309 CTBP2P56545 445 aa13.3□□□□□ -0.28
SNRPA1-207ENST00000559309 LSM11P83369 360 aaKnown RBP eCLIP13.3□□□□□ -0.28
SNRPA1-207ENST00000559309 H3F3AP84243 136 aa13.3□□□□□ -0.28
SNRPA1-207ENST00000559309 TRAM2Q15035 370 aa13.3□□□□□ -0.28
SNRPA1-207ENST00000559309 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.3□□□□□ -0.28
SNRPA1-207ENST00000559309 C1QL3Q5VWW1 255 aa13.3□□□□□ -0.28
SNRPA1-207ENST00000559309 ZNF770Q6IQ21 691 aaPredicted RBP13.3□□□□□ -0.28
SNRPA1-207ENST00000559309 ZFP1Q6P2D0 407 aa13.3□□□□□ -0.28
SNRPA1-207ENST00000559309 TMPPEQ6ZT21 453 aa13.3□□□□□ -0.28
SNRPA1-207ENST00000559309 CYP4Z1Q86W10 505 aa13.3□□□□□ -0.28
SNRPA1-207ENST00000559309 RNF113BQ8IZP6 322 aaKnown RBP13.3□□□□□ -0.28
SNRPA1-207ENST00000559309 FAM57AQ8TBR7 257 aa13.3□□□□□ -0.28
SNRPA1-207ENST00000559309 ZPLD1Q8TCW7 415 aa13.3□□□□□ -0.28
SNRPA1-207ENST00000559309 TMEM255BQ8WV15 326 aa13.3□□□□□ -0.28
SNRPA1-207ENST00000559309 ACOT11Q8WXI4 607 aaPredicted RBP13.3□□□□□ -0.28
SNRPA1-207ENST00000559309 RSRC1Q96IZ7 334 aaKnown RBP13.3□□□□□ -0.28
SNRPA1-207ENST00000559309 OR11A1Q9GZK7 315 aa13.3□□□□□ -0.28
SNRPA1-207ENST00000559309 LDAHQ9H6V9 325 aa13.3□□□□□ -0.28
SNRPA1-207ENST00000559309 RHCGQ9UBD6 479 aa13.3□□□□□ -0.28
SNRPA1-207ENST00000559309 RPS6KB2Q9UBS0 482 aa13.3□□□□□ -0.28
SNRPA1-207ENST00000559309 DNAJB9Q9UBS3 223 aa13.3□□□□□ -0.28
SNRPA1-207ENST00000559309 AURKCQ9UQB9 309 aa13.3□□□□□ -0.28
SNRPA1-207ENST00000559309 LRRK2Q5S007 2527 aa13.3□□□□□ -0.28
SNRPA1-207ENST00000559309 SH3PXD2BA1X283 911 aa13.29□□□□□ -0.28
SNRPA1-207ENST00000559309 ELOA3DA6NLF2 546 aaPredicted RBP13.29□□□□□ -0.28
SNRPA1-207ENST00000559309 H3BML4 177 aa13.29□□□□□ -0.28
SNRPA1-207ENST00000559309 HNRNPRO43390 633 aaKnown RBP13.29□□□□□ -0.28
SNRPA1-207ENST00000559309 KLF4O43474 513 aa13.29□□□□□ -0.28
SNRPA1-207ENST00000559309 PMS2P2O95744 297 aa13.29□□□□□ -0.28
SNRPA1-207ENST00000559309 POU3F2P20265 443 aaPredicted RBP13.29□□□□□ -0.28
SNRPA1-207ENST00000559309 RRM2P31350 389 aa13.29□□□□□ -0.28
SNRPA1-207ENST00000559309 PTGS2P35354 604 aa13.29□□□□□ -0.28
SNRPA1-207ENST00000559309 ERFP50548 548 aa13.29□□□□□ -0.28
SNRPA1-207ENST00000559309 ELF3P78545 371 aaPredicted RBP13.29□□□□□ -0.28
SNRPA1-207ENST00000559309 LTBQ06643 244 aa13.29□□□□□ -0.28
SNRPA1-207ENST00000559309 SEC23BQ15437 767 aa13.29□□□□□ -0.28
SNRPA1-207ENST00000559309 ATP6AP1Q15904 470 aa13.29□□□□□ -0.28
SNRPA1-207ENST00000559309 ELOA3BQ3SY89 546 aa13.29□□□□□ -0.28
SNRPA1-207ENST00000559309 C1orf140Q5VVS0 124 aa13.29□□□□□ -0.28
SNRPA1-207ENST00000559309 HMBOX1Q6NT76 420 aa13.29□□□□□ -0.28
SNRPA1-207ENST00000559309 C10orf67Q8IYJ2 551 aa13.29□□□□□ -0.28
SNRPA1-207ENST00000559309 PM20D2Q8IYS1 436 aa13.29□□□□□ -0.28
SNRPA1-207ENST00000559309 ELOA3Q8NG57 546 aa13.29□□□□□ -0.28
SNRPA1-207ENST00000559309 MFSD8Q8NHS3 518 aa13.29□□□□□ -0.28
SNRPA1-207ENST00000559309 TMEM239Q8WW34 195 aa13.29□□□□□ -0.28
SNRPA1-207ENST00000559309 TAAR8Q969N4 342 aa13.29□□□□□ -0.28
SNRPA1-207ENST00000559309 DDIT4LQ96D03 193 aa13.29□□□□□ -0.28
SNRPA1-207ENST00000559309 KTI12Q96EK9 354 aaPredicted RBP13.29□□□□□ -0.28
SNRPA1-207ENST00000559309 EPYCQ99645 322 aa13.29□□□□□ -0.28
SNRPA1-207ENST00000559309 FNDC11Q9BVV2 318 aa13.29□□□□□ -0.28
SNRPA1-207ENST00000559309 YY1AP1Q9H869 796 aa13.29□□□□□ -0.28
SNRPA1-207ENST00000559309 S100A14Q9HCY8 104 aa13.29□□□□□ -0.28
SNRPA1-207ENST00000559309 FANCFQ9NPI8 374 aa13.29□□□□□ -0.28
SNRPA1-207ENST00000559309 TNFRSF10DQ9UBN6 386 aa13.29□□□□□ -0.28
SNRPA1-207ENST00000559309 FAM32AQ9Y421 112 aaKnown RBP13.29□□□□□ -0.28
SNRPA1-207ENST00000559309 ZGRF1Q86YA3 2104 aa13.28□□□□□ -0.28
SNRPA1-207ENST00000559309 TRAV36DV7A0A075B6V5 113 aa13.28□□□□□ -0.28
SNRPA1-207ENST00000559309 LIPT2A6NK58 231 aa13.28□□□□□ -0.28
SNRPA1-207ENST00000559309 GJE1A6NN92 205 aa13.28□□□□□ -0.28
SNRPA1-207ENST00000559309 CLOCKO15516 846 aa13.28□□□□□ -0.28
SNRPA1-207ENST00000559309 ZNHIT1O43257 154 aa13.28□□□□□ -0.28
SNRPA1-207ENST00000559309 TIPRLO75663 272 aa13.28□□□□□ -0.28
SNRPA1-207ENST00000559309 BGLAPP02818 100 aa13.28□□□□□ -0.28
SNRPA1-207ENST00000559309 TCEA1P23193 301 aaKnown RBP13.28□□□□□ -0.28
SNRPA1-207ENST00000559309 GCKP35557 465 aa13.28□□□□□ -0.28
SNRPA1-207ENST00000559309 P2RY4P51582 365 aa13.28□□□□□ -0.28
SNRPA1-207ENST00000559309 AGFG1P52594 562 aaKnown RBP13.28□□□□□ -0.28
SNRPA1-207ENST00000559309 SMIM11AP58511 58 aa13.28□□□□□ -0.28
SNRPA1-207ENST00000559309 RAC3P60763 192 aa13.28□□□□□ -0.28
SNRPA1-207ENST00000559309 PRKCDQ05655 676 aa13.28□□□□□ -0.28
SNRPA1-207ENST00000559309 MYBPHQ13203 477 aa13.28□□□□□ -0.28
SNRPA1-207ENST00000559309 FHL1Q13642 323 aa13.28□□□□□ -0.28
SNRPA1-207ENST00000559309 TMEM176BQ3YBM2 270 aaPredicted RBP13.28□□□□□ -0.28
SNRPA1-207ENST00000559309 GXYLT1Q4G148 440 aa13.28□□□□□ -0.28
SNRPA1-207ENST00000559309 FAM69AQ5T7M9 428 aa13.28□□□□□ -0.28
SNRPA1-207ENST00000559309 RTL6Q6ICC9 239 aa13.28□□□□□ -0.28
SNRPA1-207ENST00000559309 PODNL1Q6PEZ8 512 aa13.28□□□□□ -0.28
SNRPA1-207ENST00000559309 MBOAT2Q6ZWT7 520 aa13.28□□□□□ -0.28
SNRPA1-207ENST00000559309 PRICKLE2Q7Z3G6 844 aa13.28□□□□□ -0.28
SNRPA1-207ENST00000559309 SLC46A3Q7Z3Q1 461 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms