RNA–Protein interactions for RNA: ENST00000558575.1

LINC01220-201, Transcript of long intergenic non-protein coding RNA 1220, humanhuman

TSL 1 (best) BASIC

Gene LINC01220, Length 715 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01220-201ENST00000558575 TNFRSF1BP20333 461 aa13.9□□□□□ -0.18
LINC01220-201ENST00000558575 SFTPDP35247 375 aa13.9□□□□□ -0.18
LINC01220-201ENST00000558575 APOBEC1P41238 236 aaKnown RBP13.9□□□□□ -0.18
LINC01220-201ENST00000558575 MXRA7P84157 204 aa13.9□□□□□ -0.18
LINC01220-201ENST00000558575 WBP2NLQ6ICG8 309 aa13.9□□□□□ -0.18
LINC01220-201ENST00000558575 POMZP3Q6PJE2 187 aa13.9□□□□□ -0.18
LINC01220-201ENST00000558575 CADM2Q8N3J6 435 aa13.9□□□□□ -0.18
LINC01220-201ENST00000558575 MEIOBQ8N635 442 aa13.9□□□□□ -0.18
LINC01220-201ENST00000558575 LSMEM1Q8N8F7 131 aa13.9□□□□□ -0.18
LINC01220-201ENST00000558575 C3orf49Q96BT1 292 aa13.9□□□□□ -0.18
LINC01220-201ENST00000558575 KLHL15Q96M94 604 aa13.9□□□□□ -0.18
LINC01220-201ENST00000558575 TRIB1Q96RU8 372 aa13.9□□□□□ -0.18
LINC01220-201ENST00000558575 COQ10BQ9H8M1 238 aa13.9□□□□□ -0.18
LINC01220-201ENST00000558575 CALHM2Q9HA72 323 aa13.9□□□□□ -0.18
LINC01220-201ENST00000558575 CLCF1Q9UBD9 225 aa13.9□□□□□ -0.18
LINC01220-201ENST00000558575 TMED7Q9Y3B3 224 aa13.9□□□□□ -0.18
LINC01220-201ENST00000558575 PHF3Q92576 2039 aaKnown RBP13.9□□□□□ -0.18
LINC01220-201ENST00000558575 A0A1W2PNR3 127 aa13.89□□□□□ -0.19
LINC01220-201ENST00000558575 TMEM72A0PK05 275 aa13.89□□□□□ -0.19
LINC01220-201ENST00000558575 ZC3H12DA2A288 527 aaKnown RBP13.89□□□□□ -0.19
LINC01220-201ENST00000558575 CXCL13O43927 109 aa13.89□□□□□ -0.19
LINC01220-201ENST00000558575 FOSL1P15407 271 aa13.89□□□□□ -0.19
LINC01220-201ENST00000558575 TCN1P20061 433 aaPredicted RBP13.89□□□□□ -0.19
LINC01220-201ENST00000558575 CCNA2P20248 432 aa13.89□□□□□ -0.19
LINC01220-201ENST00000558575 CEACAM8P31997 349 aaPredicted RBP13.89□□□□□ -0.19
LINC01220-201ENST00000558575 POLR2HP52434 150 aaKnown RBP13.89□□□□□ -0.19
LINC01220-201ENST00000558575 RGS8P57771 180 aaPredicted RBP13.89□□□□□ -0.19
LINC01220-201ENST00000558575 SELENOWP63302 87 aa13.89□□□□□ -0.19
LINC01220-201ENST00000558575 CBX1P83916 185 aa13.89□□□□□ -0.19
LINC01220-201ENST00000558575 BNIP1Q12981 228 aa13.89□□□□□ -0.19
LINC01220-201ENST00000558575 SELENBP1Q13228 472 aa13.89□□□□□ -0.19
LINC01220-201ENST00000558575 LRRC23Q53EV4 343 aaPredicted RBP13.89□□□□□ -0.19
LINC01220-201ENST00000558575 SAMD4BQ5PRF9 694 aaKnown RBP13.89□□□□□ -0.19
LINC01220-201ENST00000558575 GLYATQ6IB77 296 aa13.89□□□□□ -0.19
LINC01220-201ENST00000558575 TMEM211Q6ICI0 200 aa13.89□□□□□ -0.19
LINC01220-201ENST00000558575 ESPNLQ6ZVH7 1005 aa13.89□□□□□ -0.19
LINC01220-201ENST00000558575 ATG4DQ86TL0 474 aaPredicted RBP13.89□□□□□ -0.19
LINC01220-201ENST00000558575 TMEM200AQ86VY9 491 aa13.89□□□□□ -0.19
LINC01220-201ENST00000558575 C9orf106Q8NAJ2 232 aa13.89□□□□□ -0.19
LINC01220-201ENST00000558575 NAXEQ8NCW5 288 aa13.89□□□□□ -0.19
LINC01220-201ENST00000558575 TNIP2Q8NFZ5 429 aa13.89□□□□□ -0.19
LINC01220-201ENST00000558575 OR52E4Q8NGH9 312 aa13.89□□□□□ -0.19
LINC01220-201ENST00000558575 OR10D3Q8NH80 312 aa13.89□□□□□ -0.19
LINC01220-201ENST00000558575 OR2V1Q8NHB1 315 aa13.89□□□□□ -0.19
LINC01220-201ENST00000558575 SLC26A7Q8TE54 656 aa13.89□□□□□ -0.19
LINC01220-201ENST00000558575 OSTF1Q92882 214 aa13.89□□□□□ -0.19
LINC01220-201ENST00000558575 ARL5BQ96KC2 179 aa13.89□□□□□ -0.19
LINC01220-201ENST00000558575 OR11A1Q9GZK7 315 aa13.89□□□□□ -0.19
LINC01220-201ENST00000558575 PCDHAC1Q9H158 963 aa13.89□□□□□ -0.19
LINC01220-201ENST00000558575 C1orf21Q9H246 121 aa13.89□□□□□ -0.19
LINC01220-201ENST00000558575 NPDC1Q9NQX5 325 aaPredicted RBP13.89□□□□□ -0.19
LINC01220-201ENST00000558575 NDE1Q9NXR1 346 aa13.89□□□□□ -0.19
LINC01220-201ENST00000558575 KLHL28Q9NXS3 571 aa13.89□□□□□ -0.19
LINC01220-201ENST00000558575 CHRNA9Q9UGM1 479 aa13.89□□□□□ -0.19
LINC01220-201ENST00000558575 A0A0G2JNJ9 132 aa13.88□□□□□ -0.19
LINC01220-201ENST00000558575 A0A1B0GWA3 101 aa13.88□□□□□ -0.19
LINC01220-201ENST00000558575 MBD3L4A6NDZ8 208 aaPredicted RBP13.88□□□□□ -0.19
LINC01220-201ENST00000558575 MBD3L3A6NE82 208 aaPredicted RBP13.88□□□□□ -0.19
LINC01220-201ENST00000558575 MBD3L5A6NJ08 208 aaPredicted RBP13.88□□□□□ -0.19
LINC01220-201ENST00000558575 GSTA4O15217 222 aa13.88□□□□□ -0.19
LINC01220-201ENST00000558575 LYPD3O95274 346 aa13.88□□□□□ -0.19
LINC01220-201ENST00000558575 IFNA14P01570 189 aa13.88□□□□□ -0.19
LINC01220-201ENST00000558575 THY1P04216 161 aa13.88□□□□□ -0.19
LINC01220-201ENST00000558575 UQCRBP14927 111 aa13.88□□□□□ -0.19
LINC01220-201ENST00000558575 HTR3AP46098 478 aa13.88□□□□□ -0.19
LINC01220-201ENST00000558575 EIF1AXP47813 144 aaKnown RBP13.88□□□□□ -0.19
LINC01220-201ENST00000558575 COPZ1P61923 177 aa13.88□□□□□ -0.19
LINC01220-201ENST00000558575 BNIP2Q12982 314 aa13.88□□□□□ -0.19
LINC01220-201ENST00000558575 OR1Q1Q15612 314 aa13.88□□□□□ -0.19
LINC01220-201ENST00000558575 CBLL1Q75N03 491 aa13.88□□□□□ -0.19
LINC01220-201ENST00000558575 VTCN1Q7Z7D3 282 aa13.88□□□□□ -0.19
LINC01220-201ENST00000558575 CCDC71Q8IV32 467 aaPredicted RBP13.88□□□□□ -0.19
LINC01220-201ENST00000558575 LIX1LQ8IVB5 337 aa13.88□□□□□ -0.19
LINC01220-201ENST00000558575 MBD3L2Q8NHZ7 208 aaPredicted RBP13.88□□□□□ -0.19
LINC01220-201ENST00000558575 VANGL1Q8TAA9 524 aaPredicted RBP13.88□□□□□ -0.19
LINC01220-201ENST00000558575 WNT2BQ93097 391 aa13.88□□□□□ -0.19
LINC01220-201ENST00000558575 MCHR1Q99705 422 aa13.88□□□□□ -0.19
LINC01220-201ENST00000558575 ZNF559Q9BR84 538 aa13.88□□□□□ -0.19
LINC01220-201ENST00000558575 SRXN1Q9BYN0 137 aa13.88□□□□□ -0.19
LINC01220-201ENST00000558575 TRIM2Q9C040 744 aa13.88□□□□□ -0.19
LINC01220-201ENST00000558575 STOML1Q9UBI4 398 aa13.88□□□□□ -0.19
LINC01220-201ENST00000558575 Q9UFV3 132 aa13.88□□□□□ -0.19
LINC01220-201ENST00000558575 SLC13A4Q9UKG4 626 aa13.88□□□□□ -0.19
LINC01220-201ENST00000558575 RNF6Q9Y252 685 aa13.88□□□□□ -0.19
LINC01220-201ENST00000558575 SH3GLB1Q9Y371 365 aa13.88□□□□□ -0.19
LINC01220-201ENST00000558575 FMO6PO60774 539 aa13.87□□□□□ -0.19
LINC01220-201ENST00000558575 AQP8O94778 261 aa13.87□□□□□ -0.19
LINC01220-201ENST00000558575 SERPINA1P01009 418 aa13.87□□□□□ -0.19
LINC01220-201ENST00000558575 ME2P23368 584 aa13.87□□□□□ -0.19
LINC01220-201ENST00000558575 TIMP3P35625 211 aa13.87□□□□□ -0.19
LINC01220-201ENST00000558575 OR1E2P47887 323 aa13.87□□□□□ -0.19
LINC01220-201ENST00000558575 CARD18P57730 90 aa13.87□□□□□ -0.19
LINC01220-201ENST00000558575 RPS3AP61247 264 aaKnown RBP13.87□□□□□ -0.19
LINC01220-201ENST00000558575 SF3B4Q15427 424 aaKnown RBP eCLIP13.87□□□□□ -0.19
LINC01220-201ENST00000558575 SPATS1Q496A3 300 aa13.87□□□□□ -0.19
LINC01220-201ENST00000558575 SYT14P1Q58G82 188 aa13.87□□□□□ -0.19
LINC01220-201ENST00000558575 RIPPLY2Q5TAB7 128 aa13.87□□□□□ -0.19
LINC01220-201ENST00000558575 HBMQ6B0K9 141 aa13.87□□□□□ -0.19
LINC01220-201ENST00000558575 C3orf33Q6P1S2 294 aa13.87□□□□□ -0.19
LINC01220-201ENST00000558575 TSEN54Q7Z6J9 526 aaKnown RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms