RNA–Protein interactions for RNA: ENST00000558314.5

TPM1-211, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,031 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-211ENST00000558314 IL12AP29459 219 aa13.7□□□□□ -0.22
TPM1-211ENST00000558314 ANXA11P50995 505 aaKnown RBP13.7□□□□□ -0.22
TPM1-211ENST00000558314 POLR2HP52434 150 aaKnown RBP13.7□□□□□ -0.22
TPM1-211ENST00000558314 FOXG1P55316 489 aaPredicted RBP13.7□□□□□ -0.22
TPM1-211ENST00000558314 GNA13Q14344 377 aa13.7□□□□□ -0.22
TPM1-211ENST00000558314 COX20Q5RI15 118 aa13.7□□□□□ -0.22
TPM1-211ENST00000558314 SEZ6L2Q6UXD5 910 aa13.7□□□□□ -0.22
TPM1-211ENST00000558314 KIRREL3Q8IZU9 778 aa13.7□□□□□ -0.22
TPM1-211ENST00000558314 HTRA1Q92743 480 aa13.7□□□□□ -0.22
TPM1-211ENST00000558314 NAA11Q9BSU3 229 aaPredicted RBP13.7□□□□□ -0.22
TPM1-211ENST00000558314 TRAF4Q9BUZ4 470 aaPredicted RBP13.7□□□□□ -0.22
TPM1-211ENST00000558314 SAP130Q9H0E3 1048 aa13.7□□□□□ -0.22
TPM1-211ENST00000558314 FAIMQ9NVQ4 179 aa13.7□□□□□ -0.22
TPM1-211ENST00000558314 AIG1Q9NVV5 245 aa13.7□□□□□ -0.22
TPM1-211ENST00000558314 ASB6Q9NWX5 421 aa13.7□□□□□ -0.22
TPM1-211ENST00000558314 TMEM181Q9P2C4 612 aa13.7□□□□□ -0.22
TPM1-211ENST00000558314 UPB1Q9UBR1 384 aa13.7□□□□□ -0.22
TPM1-211ENST00000558314 BTNL2Q9UIR0 455 aa13.7□□□□□ -0.22
TPM1-211ENST00000558314 IGKV3D-15A0A087WSY6 115 aa13.69□□□□□ -0.22
TPM1-211ENST00000558314 ZNF716A6NP11 495 aa13.69□□□□□ -0.22
TPM1-211ENST00000558314 SNUPNO95149 360 aaKnown RBP13.69□□□□□ -0.22
TPM1-211ENST00000558314 ANP32DO95626 131 aa13.69□□□□□ -0.22
TPM1-211ENST00000558314 PGRP06401 933 aa13.69□□□□□ -0.22
TPM1-211ENST00000558314 GKN3PP0CG01 181 aa13.69□□□□□ -0.22
TPM1-211ENST00000558314 HTR3AP46098 478 aa13.69□□□□□ -0.22
TPM1-211ENST00000558314 SLC35A1P78382 337 aa13.69□□□□□ -0.22
TPM1-211ENST00000558314 PLAURQ03405 335 aa13.69□□□□□ -0.22
TPM1-211ENST00000558314 DMTNQ08495 405 aa13.69□□□□□ -0.22
TPM1-211ENST00000558314 MRPL2Q5T653 305 aaKnown RBP13.69□□□□□ -0.22
TPM1-211ENST00000558314 KLHL17Q6TDP4 642 aa13.69□□□□□ -0.22
TPM1-211ENST00000558314 TMEM108Q6UXF1 575 aa13.69□□□□□ -0.22
TPM1-211ENST00000558314 SPATA19Q7Z5L4 167 aa13.69□□□□□ -0.22
TPM1-211ENST00000558314 CADM2Q8N3J6 435 aa13.69□□□□□ -0.22
TPM1-211ENST00000558314 RADILQ96JH8 1075 aa13.69□□□□□ -0.22
TPM1-211ENST00000558314 TRNT1Q96Q11 434 aaKnown RBP13.69□□□□□ -0.22
TPM1-211ENST00000558314 SLC38A1Q9H2H9 487 aa13.69□□□□□ -0.22
TPM1-211ENST00000558314 EXOSC3Q9NQT5 275 aaKnown RBP13.69□□□□□ -0.22
TPM1-211ENST00000558314 YAE1D1Q9NRH1 226 aa13.69□□□□□ -0.22
TPM1-211ENST00000558314 OSGIN1Q9UJX0 560 aa13.69□□□□□ -0.22
TPM1-211ENST00000558314 ATP23Q9Y6H3 246 aa13.69□□□□□ -0.22
TPM1-211ENST00000558314 CADP27708 2225 aa13.69□□□□□ -0.22
TPM1-211ENST00000558314 ZC3H12DA2A288 527 aaKnown RBP13.68□□□□□ -0.22
TPM1-211ENST00000558314 CFAP73A6NFT4 308 aa13.68□□□□□ -0.22
TPM1-211ENST00000558314 AGAP5A6NIR3 686 aa13.68□□□□□ -0.22
TPM1-211ENST00000558314 RFXANKO14593 260 aa13.68□□□□□ -0.22
TPM1-211ENST00000558314 CD8AP01732 235 aa13.68□□□□□ -0.22
TPM1-211ENST00000558314 IMPDH2P12268 514 aa13.68□□□□□ -0.22
TPM1-211ENST00000558314 UQCRBP14927 111 aa13.68□□□□□ -0.22
TPM1-211ENST00000558314 NTF4P34130 210 aa13.68□□□□□ -0.22
TPM1-211ENST00000558314 CRATP43155 626 aa13.68□□□□□ -0.22
TPM1-211ENST00000558314 NUDT6P53370 316 aa13.68□□□□□ -0.22
TPM1-211ENST00000558314 PDK3Q15120 406 aa13.68□□□□□ -0.22
TPM1-211ENST00000558314 OR7A5Q15622 319 aa13.68□□□□□ -0.22
TPM1-211ENST00000558314 ETFDHQ16134 617 aa13.68□□□□□ -0.22
TPM1-211ENST00000558314 AGAP6Q5VW22 663 aa13.68□□□□□ -0.22
TPM1-211ENST00000558314 LRRC74BQ6ZQY2 392 aa13.68□□□□□ -0.22
TPM1-211ENST00000558314 P2RY8Q86VZ1 359 aa13.68□□□□□ -0.22
TPM1-211ENST00000558314 PEX5LQ8IYB4 626 aa13.68□□□□□ -0.22
TPM1-211ENST00000558314 DEPDC4Q8N2C3 294 aa13.68□□□□□ -0.22
TPM1-211ENST00000558314 MDFIQ99750 246 aa13.68□□□□□ -0.22
TPM1-211ENST00000558314 CACNG6Q9BXT2 260 aa13.68□□□□□ -0.22
TPM1-211ENST00000558314 MTHFD2LQ9H903 347 aaPredicted RBP13.68□□□□□ -0.22
TPM1-211ENST00000558314 RLIMQ9NVW2 624 aa13.68□□□□□ -0.22
TPM1-211ENST00000558314 TAS2R16Q9NYV7 291 aa13.68□□□□□ -0.22
TPM1-211ENST00000558314 B3GALT5Q9Y2C3 310 aa13.68□□□□□ -0.22
TPM1-211ENST00000558314 TRPC5OSA6NMA1 111 aa13.67□□□□□ -0.22
TPM1-211ENST00000558314 E7EQL1 145 aa13.67□□□□□ -0.22
TPM1-211ENST00000558314 KRT33AO76009 404 aa13.67□□□□□ -0.22
TPM1-211ENST00000558314 PGM3O95394 542 aa13.67□□□□□ -0.22
TPM1-211ENST00000558314 KRT75O95678 551 aa13.67□□□□□ -0.22
TPM1-211ENST00000558314 BCHEP06276 602 aa13.67□□□□□ -0.22
TPM1-211ENST00000558314 DBIP07108 87 aaKnown RBP13.67□□□□□ -0.22
TPM1-211ENST00000558314 GUSBP08236 651 aa13.67□□□□□ -0.22
TPM1-211ENST00000558314 NCF2P19878 526 aaPredicted RBP13.67□□□□□ -0.22
TPM1-211ENST00000558314 CXCR1P25024 350 aa13.67□□□□□ -0.22
TPM1-211ENST00000558314 CLK1P49759 484 aaKnown RBP13.67□□□□□ -0.22
TPM1-211ENST00000558314 FABP6P51161 128 aa13.67□□□□□ -0.22
TPM1-211ENST00000558314 BNIP2Q12982 314 aa13.67□□□□□ -0.22
TPM1-211ENST00000558314 CEACAM7Q14002 265 aa13.67□□□□□ -0.22
TPM1-211ENST00000558314 OTUD3Q5T2D3 398 aaPredicted RBP13.67□□□□□ -0.22
TPM1-211ENST00000558314 OGFOD2Q6N063 350 aa13.67□□□□□ -0.22
TPM1-211ENST00000558314 GPAT4Q86UL3 456 aa13.67□□□□□ -0.22
TPM1-211ENST00000558314 VRK2Q86Y07 508 aa13.67□□□□□ -0.22
TPM1-211ENST00000558314 FBXL14Q8N1E6 418 aa13.67□□□□□ -0.22
TPM1-211ENST00000558314 OIT3Q8WWZ8 545 aa13.67□□□□□ -0.22
TPM1-211ENST00000558314 ADAD1Q96M93 576 aaKnown RBP13.67□□□□□ -0.22
TPM1-211ENST00000558314 RHNO1Q9BSD3 238 aa13.67□□□□□ -0.22
TPM1-211ENST00000558314 CACYBPQ9HB71 228 aaKnown RBP13.67□□□□□ -0.22
TPM1-211ENST00000558314 BARX1Q9HBU1 254 aaPredicted RBP13.67□□□□□ -0.22
TPM1-211ENST00000558314 HAO1Q9UJM8 370 aa13.67□□□□□ -0.22
TPM1-211ENST00000558314 ADAM21Q9UKJ8 722 aa13.67□□□□□ -0.22
TPM1-211ENST00000558314 SLC25A15Q9Y619 301 aa13.67□□□□□ -0.22
TPM1-211ENST00000558314 TMEM120BA0PK00 339 aa13.66□□□□□ -0.22
TPM1-211ENST00000558314 HDAC3O15379 428 aa13.66□□□□□ -0.22
TPM1-211ENST00000558314 EIF1BO60739 113 aaKnown RBP13.66□□□□□ -0.22
TPM1-211ENST00000558314 AKR7A3O95154 331 aa13.66□□□□□ -0.22
TPM1-211ENST00000558314 ITGA5P08648 1049 aa13.66□□□□□ -0.22
TPM1-211ENST00000558314 ETFAP13804 333 aa13.66□□□□□ -0.22
TPM1-211ENST00000558314 PTAFRP25105 342 aa13.66□□□□□ -0.22
TPM1-211ENST00000558314 CD40P25942 277 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms