RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 KRT84Q9NSB2 600 aa11.23□□□□□ -0.61
TPM1-209ENST00000558072 TRAPPC4Q9Y296 219 aa11.23□□□□□ -0.61
TPM1-209ENST00000558072 CORINQ9Y5Q5 1042 aa11.23□□□□□ -0.61
TPM1-209ENST00000558072 PINLYPA6NC86 204 aa11.22□□□□□ -0.61
TPM1-209ENST00000558072 ERVH48-1M5A8F1 160 aa11.22□□□□□ -0.61
TPM1-209ENST00000558072 ZIC3O60481 467 aa11.22□□□□□ -0.61
TPM1-209ENST00000558072 LYPD3O95274 346 aa11.22□□□□□ -0.61
TPM1-209ENST00000558072 IFI30P13284 250 aa11.22□□□□□ -0.61
TPM1-209ENST00000558072 RPS3AP61247 264 aaKnown RBP11.22□□□□□ -0.61
TPM1-209ENST00000558072 ESRRGP62508 458 aa11.22□□□□□ -0.61
TPM1-209ENST00000558072 CSNK2A1P68400 391 aaPredicted RBP11.22□□□□□ -0.61
TPM1-209ENST00000558072 PPP2R2BQ00005 443 aa11.22□□□□□ -0.61
TPM1-209ENST00000558072 ALDH6A1Q02252 535 aaKnown RBP11.22□□□□□ -0.61
TPM1-209ENST00000558072 CRYZQ08257 329 aaKnown RBP11.22□□□□□ -0.61
TPM1-209ENST00000558072 LY6DQ14210 128 aa11.22□□□□□ -0.61
TPM1-209ENST00000558072 INPP5JQ15735 1006 aaPredicted RBP11.22□□□□□ -0.61
TPM1-209ENST00000558072 TOMM34Q15785 309 aaPredicted RBP11.22□□□□□ -0.61
TPM1-209ENST00000558072 TMEM44Q2T9K0 475 aa11.22□□□□□ -0.61
TPM1-209ENST00000558072 KRTCAP3Q53RY4 240 aa11.22□□□□□ -0.61
TPM1-209ENST00000558072 SYT14P1Q58G82 188 aa11.22□□□□□ -0.61
TPM1-209ENST00000558072 FAM69AQ5T7M9 428 aa11.22□□□□□ -0.61
TPM1-209ENST00000558072 WLSQ5T9L3 541 aa11.22□□□□□ -0.61
TPM1-209ENST00000558072 MAMDC2Q7Z304 686 aaPredicted RBP11.22□□□□□ -0.61
TPM1-209ENST00000558072 HEATR5AQ86XA9 2040 aa11.22□□□□□ -0.61
TPM1-209ENST00000558072 NRMQ8IXM6 262 aa11.22□□□□□ -0.61
TPM1-209ENST00000558072 TMEM251Q8N6I4 163 aa11.22□□□□□ -0.61
TPM1-209ENST00000558072 CLDN22Q8N7P3 220 aa11.22□□□□□ -0.61
TPM1-209ENST00000558072 TEX19Q8NA77 164 aa11.22□□□□□ -0.61
TPM1-209ENST00000558072 AQP11Q8NBQ7 271 aa11.22□□□□□ -0.61
TPM1-209ENST00000558072 MFSD8Q8NHS3 518 aa11.22□□□□□ -0.61
TPM1-209ENST00000558072 MAGEE2Q8TD90 523 aaPredicted RBP11.22□□□□□ -0.61
TPM1-209ENST00000558072 TMEM255BQ8WV15 326 aa11.22□□□□□ -0.61
TPM1-209ENST00000558072 LIPHQ8WWY8 451 aa11.22□□□□□ -0.61
TPM1-209ENST00000558072 BPIFA2Q96DR5 249 aa11.22□□□□□ -0.61
TPM1-209ENST00000558072 FEVQ99581 238 aa11.22□□□□□ -0.61
TPM1-209ENST00000558072 ASPNQ9BXN1 380 aa11.22□□□□□ -0.61
TPM1-209ENST00000558072 PRRG3Q9BZD7 231 aa11.22□□□□□ -0.61
TPM1-209ENST00000558072 UCK2Q9BZX2 261 aa11.22□□□□□ -0.61
TPM1-209ENST00000558072 LDAHQ9H6V9 325 aa11.22□□□□□ -0.61
TPM1-209ENST00000558072 EXO5Q9H790 373 aa11.22□□□□□ -0.61
TPM1-209ENST00000558072 COQ10BQ9H8M1 238 aa11.22□□□□□ -0.61
TPM1-209ENST00000558072 ZDHHC11Q9H8X9 412 aa11.22□□□□□ -0.61
TPM1-209ENST00000558072 FKRPQ9H9S5 495 aa11.22□□□□□ -0.61
TPM1-209ENST00000558072 ZNF229Q9UJW7 825 aa11.22□□□□□ -0.61
TPM1-209ENST00000558072 NTNG1Q9Y2I2 539 aa11.22□□□□□ -0.61
TPM1-209ENST00000558072 ZNF337Q9Y3M9 751 aa11.22□□□□□ -0.61
TPM1-209ENST00000558072 OR2M5A3KFT3 312 aa11.21□□□□□ -0.61
TPM1-209ENST00000558072 EFCAB9A8MZ26 197 aa11.21□□□□□ -0.61
TPM1-209ENST00000558072 B4DXG7 233 aa11.21□□□□□ -0.61
TPM1-209ENST00000558072 EI24O14681 340 aa11.21□□□□□ -0.61
TPM1-209ENST00000558072 EIF1BO60739 113 aaKnown RBP11.21□□□□□ -0.61
TPM1-209ENST00000558072 THY1P04216 161 aa11.21□□□□□ -0.61
TPM1-209ENST00000558072 ALPLP05186 524 aa11.21□□□□□ -0.61
TPM1-209ENST00000558072 SAGP10523 405 aaPredicted RBP11.21□□□□□ -0.61
TPM1-209ENST00000558072 TFPIP10646 304 aa11.21□□□□□ -0.61
TPM1-209ENST00000558072 BMP7P18075 431 aa11.21□□□□□ -0.61
TPM1-209ENST00000558072 CBLP22681 906 aa11.21□□□□□ -0.61
TPM1-209ENST00000558072 PEX2P28328 305 aa11.21□□□□□ -0.61
TPM1-209ENST00000558072 IDUAP35475 653 aa11.21□□□□□ -0.61
TPM1-209ENST00000558072 RFC3P40938 356 aa11.21□□□□□ -0.61
TPM1-209ENST00000558072 PRPS1P60891 318 aa11.21□□□□□ -0.61
TPM1-209ENST00000558072 PMP22Q01453 160 aa11.21□□□□□ -0.61
TPM1-209ENST00000558072 LRRC36Q1X8D7 754 aa11.21□□□□□ -0.61
TPM1-209ENST00000558072 NHSL2Q5HYW2 709 aa11.21□□□□□ -0.61
TPM1-209ENST00000558072 C1orf140Q5VVS0 124 aa11.21□□□□□ -0.61
TPM1-209ENST00000558072 TTC23Q5W5X9 447 aa11.21□□□□□ -0.61
TPM1-209ENST00000558072 LPCAT4Q643R3 524 aa11.21□□□□□ -0.61
TPM1-209ENST00000558072 KDM4DQ6B0I6 523 aa11.21□□□□□ -0.61
TPM1-209ENST00000558072 ZNF770Q6IQ21 691 aaPredicted RBP11.21□□□□□ -0.61
TPM1-209ENST00000558072 PGBD2Q6P3X8 592 aa11.21□□□□□ -0.61
TPM1-209ENST00000558072 FAM180AQ6UWF9 173 aa11.21□□□□□ -0.61
TPM1-209ENST00000558072 RASSF6Q6ZTQ3 369 aa11.21□□□□□ -0.61
TPM1-209ENST00000558072 ESPNLQ6ZVH7 1005 aa11.21□□□□□ -0.61
TPM1-209ENST00000558072 MEIOBQ8N635 442 aa11.21□□□□□ -0.61
TPM1-209ENST00000558072 C10orf53Q8N6V4 93 aa11.21□□□□□ -0.61
TPM1-209ENST00000558072 RBMXL3Q8N7X1 1067 aaKnown RBP11.21□□□□□ -0.61
TPM1-209ENST00000558072 SCAIQ8N9R8 606 aa11.21□□□□□ -0.61
TPM1-209ENST00000558072 ZNF555Q8NEP9 628 aa11.21□□□□□ -0.61
TPM1-209ENST00000558072 OSTF1Q92882 214 aa11.21□□□□□ -0.61
TPM1-209ENST00000558072 NANSQ9NR45 359 aa11.21□□□□□ -0.61
TPM1-209ENST00000558072 SMPD3Q9NY59 655 aaPredicted RBP11.21□□□□□ -0.61
TPM1-209ENST00000558072 VNN3Q9NY84 501 aa11.21□□□□□ -0.61
TPM1-209ENST00000558072 LOC400499M0QZD8 3231 aa11.21□□□□□ -0.62
TPM1-209ENST00000558072 NCKAP5O14513 1909 aa11.2□□□□□ -0.62
TPM1-209ENST00000558072 TRGV5A0A0B4J1U4 118 aa11.2□□□□□ -0.62
TPM1-209ENST00000558072 TMEM72A0PK05 275 aa11.2□□□□□ -0.62
TPM1-209ENST00000558072 UNC119BA6NIH7 251 aa11.2□□□□□ -0.62
TPM1-209ENST00000558072 ENO4A6NNW6 628 aa11.2□□□□□ -0.62
TPM1-209ENST00000558072 PDLIM1O00151 329 aa11.2□□□□□ -0.62
TPM1-209ENST00000558072 SEC14L5O43304 696 aa11.2□□□□□ -0.62
TPM1-209ENST00000558072 NPIPB7O75200 414 aa11.2□□□□□ -0.62
TPM1-209ENST00000558072 OR7A10O76100 309 aa11.2□□□□□ -0.62
TPM1-209ENST00000558072 OR6A2O95222 327 aa11.2□□□□□ -0.62
TPM1-209ENST00000558072 PMS2P2O95744 297 aa11.2□□□□□ -0.62
TPM1-209ENST00000558072 GASTP01350 101 aa11.2□□□□□ -0.62
TPM1-209ENST00000558072 IGHG3P01860 377 aa11.2□□□□□ -0.62
TPM1-209ENST00000558072 OSMP13725 252 aa11.2□□□□□ -0.62
TPM1-209ENST00000558072 ZNF26P17031 533 aaPredicted RBP11.2□□□□□ -0.62
TPM1-209ENST00000558072 POU3F2P20265 443 aaPredicted RBP11.2□□□□□ -0.62
TPM1-209ENST00000558072 MST1P26927 711 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms