RNA–Protein interactions for RNA: ENST00000557933.5

LDLR-205, Transcript of low density lipoprotein receptor, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LDLR, Length 2,941 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-205ENST00000557933 GATSQ8NAP1 163 aa11.38□□□□□ -0.59
LDLR-205ENST00000557933 OR4N2Q8NGD1 307 aa11.38□□□□□ -0.59
LDLR-205ENST00000557933 OR4D10Q8NGI6 311 aa11.38□□□□□ -0.59
LDLR-205ENST00000557933 OR4C6Q8NH72 309 aa11.38□□□□□ -0.59
LDLR-205ENST00000557933 DVL3Q92997 716 aaPredicted RBP11.38□□□□□ -0.59
LDLR-205ENST00000557933 PELI1Q96FA3 418 aa11.38□□□□□ -0.59
LDLR-205ENST00000557933 C1QTNF2Q9BXJ5 285 aa11.38□□□□□ -0.59
LDLR-205ENST00000557933 GSX2Q9BZM3 304 aa11.38□□□□□ -0.59
LDLR-205ENST00000557933 WASH6PQ9NQA3 447 aa11.38□□□□□ -0.59
LDLR-205ENST00000557933 MAB21L2Q9Y586 359 aa11.38□□□□□ -0.59
LDLR-205ENST00000557933 ARHGEF17Q96PE2 2063 aaPredicted RBP11.38□□□□□ -0.59
LDLR-205ENST00000557933 MEIKINA0A087WXM9 373 aa11.38□□□□□ -0.59
LDLR-205ENST00000557933 H0YC42 278 aa11.38□□□□□ -0.59
LDLR-205ENST00000557933 H7C1C5 153 aa11.38□□□□□ -0.59
LDLR-205ENST00000557933 SLC31A1O15431 190 aa11.38□□□□□ -0.59
LDLR-205ENST00000557933 GPANK1O95872 356 aa11.38□□□□□ -0.59
LDLR-205ENST00000557933 PRNPP04156 253 aa11.38□□□□□ -0.59
LDLR-205ENST00000557933 LPLP06858 475 aa11.38□□□□□ -0.59
LDLR-205ENST00000557933 SULT1A3P0DMM9 295 aa11.38□□□□□ -0.59
LDLR-205ENST00000557933 SULT1A4P0DMN0 295 aa11.38□□□□□ -0.59
LDLR-205ENST00000557933 PVRP15151 417 aa11.38□□□□□ -0.59
LDLR-205ENST00000557933 LCN6P62502 163 aa11.38□□□□□ -0.59
LDLR-205ENST00000557933 HTR4Q13639 388 aa11.38□□□□□ -0.59
LDLR-205ENST00000557933 DECR1Q16698 335 aa11.38□□□□□ -0.59
LDLR-205ENST00000557933 BEX5Q5H9J7 111 aa11.38□□□□□ -0.59
LDLR-205ENST00000557933 CD276Q5ZPR3 534 aa11.38□□□□□ -0.59
LDLR-205ENST00000557933 HEPHL1Q6MZM0 1159 aa11.38□□□□□ -0.59
LDLR-205ENST00000557933 MFSD12Q6NUT3 480 aa11.38□□□□□ -0.59
LDLR-205ENST00000557933 NDUFAF7Q7L592 441 aa11.38□□□□□ -0.59
LDLR-205ENST00000557933 MEIOBQ8N635 442 aa11.38□□□□□ -0.59
LDLR-205ENST00000557933 OR56A1Q8NGH5 318 aa11.38□□□□□ -0.59
LDLR-205ENST00000557933 CCL4L1Q8NHW4 92 aa11.38□□□□□ -0.59
LDLR-205ENST00000557933 OR8D1Q8WZ84 308 aa11.38□□□□□ -0.59
LDLR-205ENST00000557933 OR2M2Q96R28 347 aa11.38□□□□□ -0.59
LDLR-205ENST00000557933 NMNAT3Q96T66 252 aa11.38□□□□□ -0.59
LDLR-205ENST00000557933 FAM83CQ9BQN1 747 aa11.38□□□□□ -0.59
LDLR-205ENST00000557933 ULBP3Q9BZM4 244 aa11.38□□□□□ -0.59
LDLR-205ENST00000557933 TMEM168Q9H0V1 697 aa11.38□□□□□ -0.59
LDLR-205ENST00000557933 HRASLSQ9HDD0 168 aa11.38□□□□□ -0.59
LDLR-205ENST00000557933 SDHAF2Q9NX18 166 aa11.38□□□□□ -0.59
LDLR-205ENST00000557933 TRIM77I1YAP6 450 aa11.37□□□□□ -0.59
LDLR-205ENST00000557933 J3QRE1 110 aa11.37□□□□□ -0.59
LDLR-205ENST00000557933 L7N2F9 121 aa11.37□□□□□ -0.59
LDLR-205ENST00000557933 KLF4O43474 513 aa11.37□□□□□ -0.59
LDLR-205ENST00000557933 HMGN1P05114 100 aa11.37□□□□□ -0.59
LDLR-205ENST00000557933 HIST1H1CP16403 213 aaKnown RBP11.37□□□□□ -0.59
LDLR-205ENST00000557933 PEBP1P30086 187 aaKnown RBP11.37□□□□□ -0.59
LDLR-205ENST00000557933 MAZP56270 477 aaKnown RBP11.37□□□□□ -0.59
LDLR-205ENST00000557933 ZNF77Q15935 545 aa11.37□□□□□ -0.59
LDLR-205ENST00000557933 ZNF761Q86XN6 746 aaPredicted RBP11.37□□□□□ -0.59
LDLR-205ENST00000557933 ZNF511Q8NB15 262 aa11.37□□□□□ -0.59
LDLR-205ENST00000557933 OR6M1Q8NGM8 313 aa11.37□□□□□ -0.59
LDLR-205ENST00000557933 ACOT12Q8WYK0 555 aa11.37□□□□□ -0.59
LDLR-205ENST00000557933 TRPV4Q9HBA0 871 aa11.37□□□□□ -0.59
LDLR-205ENST00000557933 ISYNA1Q9NPH2 558 aa11.37□□□□□ -0.59
LDLR-205ENST00000557933 NTMQ9P121 344 aa11.37□□□□□ -0.59
LDLR-205ENST00000557933 ATG2AQ2TAZ0 1938 aa11.37□□□□□ -0.59
LDLR-205ENST00000557933 A0A1B0GVI7 797 aa11.37□□□□□ -0.59
LDLR-205ENST00000557933 A0A1W2PP55 124 aa11.37□□□□□ -0.59
LDLR-205ENST00000557933 FAM86C2PA6NEL3 165 aa11.37□□□□□ -0.59
LDLR-205ENST00000557933 RIIAD1A6NNX1 92 aa11.37□□□□□ -0.59
LDLR-205ENST00000557933 PRR32B1ATL7 298 aa11.37□□□□□ -0.59
LDLR-205ENST00000557933 PEX14O75381 377 aa11.37□□□□□ -0.59
LDLR-205ENST00000557933 IGF2P01344 180 aa11.37□□□□□ -0.59
LDLR-205ENST00000557933 APOC3P02656 99 aa11.37□□□□□ -0.59
LDLR-205ENST00000557933 MAS1P04201 325 aa11.37□□□□□ -0.59
LDLR-205ENST00000557933 RRASP10301 218 aa11.37□□□□□ -0.59
LDLR-205ENST00000557933 RPL4P36578 427 aaKnown RBP11.37□□□□□ -0.59
LDLR-205ENST00000557933 GUCA2AQ02747 115 aa11.37□□□□□ -0.59
LDLR-205ENST00000557933 LRRC37A5PQ49AS3 106 aa11.37□□□□□ -0.59
LDLR-205ENST00000557933 GARNL3Q5VVW2 1013 aa11.37□□□□□ -0.59
LDLR-205ENST00000557933 LILRA6Q6PI73 481 aa11.37□□□□□ -0.59
LDLR-205ENST00000557933 ERN2Q76MJ5 926 aaKnown RBP11.37□□□□□ -0.59
LDLR-205ENST00000557933 C1orf216Q8TAB5 229 aa11.37□□□□□ -0.59
LDLR-205ENST00000557933 ADAMTS14Q8WXS8 1223 aa11.37□□□□□ -0.59
LDLR-205ENST00000557933 ST8SIA4Q92187 359 aa11.37□□□□□ -0.59
LDLR-205ENST00000557933 SDF2Q99470 211 aa11.37□□□□□ -0.59
LDLR-205ENST00000557933 SARGQ9BW04 601 aa11.37□□□□□ -0.59
LDLR-205ENST00000557933 ACTRT3Q9BYD9 372 aa11.37□□□□□ -0.59
LDLR-205ENST00000557933 ARL6Q9H0F7 186 aa11.37□□□□□ -0.59
LDLR-205ENST00000557933 LIN7BQ9HAP6 207 aa11.37□□□□□ -0.59
LDLR-205ENST00000557933 PELI2Q9HAT8 420 aa11.37□□□□□ -0.59
LDLR-205ENST00000557933 MCCC2Q9HCC0 563 aa11.37□□□□□ -0.59
LDLR-205ENST00000557933 NUP50Q9UKX7 468 aa11.37□□□□□ -0.59
LDLR-205ENST00000557933 CES1P1Q9UKY3 287 aa11.37□□□□□ -0.59
LDLR-205ENST00000557933 MED12Q93074 2177 aa11.37□□□□□ -0.59
LDLR-205ENST00000557933 LOC100509620A0A075B734 347 aa11.36□□□□□ -0.59
LDLR-205ENST00000557933 OR6C74A6NCV1 312 aa11.36□□□□□ -0.59
LDLR-205ENST00000557933 KCNAB3O43448 404 aa11.36□□□□□ -0.59
LDLR-205ENST00000557933 UBL3O95164 117 aa11.36□□□□□ -0.59
LDLR-205ENST00000557933 NT5EP21589 574 aa11.36□□□□□ -0.59
LDLR-205ENST00000557933 RAB28P51157 221 aa11.36□□□□□ -0.59
LDLR-205ENST00000557933 CCR9P51686 369 aa11.36□□□□□ -0.59
LDLR-205ENST00000557933 AKR1C2P52895 323 aa11.36□□□□□ -0.59
LDLR-205ENST00000557933 PSMA6P60900 246 aaKnown RBP11.36□□□□□ -0.59
LDLR-205ENST00000557933 AKR1C1Q04828 323 aa11.36□□□□□ -0.59
LDLR-205ENST00000557933 RIN1Q13671 783 aa11.36□□□□□ -0.59
LDLR-205ENST00000557933 KLF9Q13886 244 aaPredicted RBP11.36□□□□□ -0.59
LDLR-205ENST00000557933 ATXN7L3Q14CW9 347 aaPredicted RBP11.36□□□□□ -0.59
LDLR-205ENST00000557933 COL28A1Q2UY09 1125 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms