RNA–Protein interactions for RNA: ENST00000557866.1

SPG11-204, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 468 nt, Biotype non stop decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-204ENST00000557866 POLDIP3Q9BY77 421 aaKnown RBP6.72□□□□□ -1.33
SPG11-204ENST00000557866 STRADBQ9C0K7 418 aa6.72□□□□□ -1.33
SPG11-204ENST00000557866 CCDC90BQ9GZT6 254 aa6.72□□□□□ -1.33
SPG11-204ENST00000557866 NAA50Q9GZZ1 169 aaKnown RBP6.72□□□□□ -1.33
SPG11-204ENST00000557866 LHPPQ9H008 270 aa6.72□□□□□ -1.33
SPG11-204ENST00000557866 ZNF700Q9H0M5 742 aa6.72□□□□□ -1.33
SPG11-204ENST00000557866 CXorf56Q9H5V9 222 aa6.72□□□□□ -1.33
SPG11-204ENST00000557866 ZBTB20Q9HC78 741 aaPredicted RBP6.72□□□□□ -1.33
SPG11-204ENST00000557866 ACOT13Q9NPJ3 140 aa6.72□□□□□ -1.33
SPG11-204ENST00000557866 CLN6Q9NWW5 311 aa6.72□□□□□ -1.33
SPG11-204ENST00000557866 GPR83Q9NYM4 423 aa6.72□□□□□ -1.33
SPG11-204ENST00000557866 AKAP7Q9P0M2 348 aaPredicted RBP6.72□□□□□ -1.33
SPG11-204ENST00000557866 C19orf25Q9UFG5 118 aaPredicted RBP6.72□□□□□ -1.33
SPG11-204ENST00000557866 PISDQ9UG56 409 aa6.72□□□□□ -1.33
SPG11-204ENST00000557866 IL20RAQ9UHF4 553 aa6.72□□□□□ -1.33
SPG11-204ENST00000557866 NXT1Q9UKK6 140 aaKnown RBP6.72□□□□□ -1.33
SPG11-204ENST00000557866 MED31Q9Y3C7 131 aa6.72□□□□□ -1.33
SPG11-204ENST00000557866 PTRH2Q9Y3E5 179 aaKnown RBP6.72□□□□□ -1.33
SPG11-204ENST00000557866 NPFFR2Q9Y5X5 522 aa6.72□□□□□ -1.33
SPG11-204ENST00000557866 HS3ST3B1Q9Y662 390 aa6.72□□□□□ -1.33
SPG11-204ENST00000557866 COL27A1Q8IZC6 1860 aaPredicted RBP6.72□□□□□ -1.33
SPG11-204ENST00000557866 KMT2EQ8IZD2 1858 aa6.72□□□□□ -1.33
SPG11-204ENST00000557866 CCDC88CQ9P219 2028 aa6.72□□□□□ -1.33
SPG11-204ENST00000557866 ASCC3Q8N3C0 2202 aaKnown RBP6.72□□□□□ -1.33
SPG11-204ENST00000557866 WDR87Q6ZQQ6 2873 aa6.71□□□□□ -1.33
SPG11-204ENST00000557866 COL5A1P20908 1838 aaPredicted RBP6.71□□□□□ -1.33
SPG11-204ENST00000557866 NUP210LQ5VU65 1888 aa6.71□□□□□ -1.34
SPG11-204ENST00000557866 CACNA1HO95180 2353 aa6.71□□□□□ -1.34
SPG11-204ENST00000557866 IGHV1-45A0A0A0MS14 117 aa6.71□□□□□ -1.34
SPG11-204ENST00000557866 ENO4A6NNW6 628 aa6.71□□□□□ -1.34
SPG11-204ENST00000557866 EFCAB9A8MZ26 197 aa6.71□□□□□ -1.34
SPG11-204ENST00000557866 KDM4EB2RXH2 506 aaPredicted RBP6.71□□□□□ -1.34
SPG11-204ENST00000557866 C9J4A7 227 aa6.71□□□□□ -1.34
SPG11-204ENST00000557866 LRRN3E7EW58 273 aa6.71□□□□□ -1.34
SPG11-204ENST00000557866 TMX2-CTNND1H3BSU7 103 aa6.71□□□□□ -1.34
SPG11-204ENST00000557866 MASP2O00187 686 aa6.71□□□□□ -1.34
SPG11-204ENST00000557866 BHLHE40O14503 412 aa6.71□□□□□ -1.34
SPG11-204ENST00000557866 SOCS6O14544 535 aa6.71□□□□□ -1.34
SPG11-204ENST00000557866 SURF4O15260 269 aa6.71□□□□□ -1.34
SPG11-204ENST00000557866 SCO2O43819 266 aa6.71□□□□□ -1.34
SPG11-204ENST00000557866 SLC2A10O95528 541 aa6.71□□□□□ -1.34
SPG11-204ENST00000557866 FADS2O95864 444 aaKnown RBP6.71□□□□□ -1.34
SPG11-204ENST00000557866 CH25HO95992 272 aa6.71□□□□□ -1.34
SPG11-204ENST00000557866 LCKP06239 509 aa6.71□□□□□ -1.34
SPG11-204ENST00000557866 COX6A1P12074 109 aa6.71□□□□□ -1.34
SPG11-204ENST00000557866 HPGDP15428 266 aa6.71□□□□□ -1.34
SPG11-204ENST00000557866 DCKP27707 260 aa6.71□□□□□ -1.34
SPG11-204ENST00000557866 ZNF91Q05481 1191 aa6.71□□□□□ -1.34
SPG11-204ENST00000557866 CRYZQ08257 329 aaKnown RBP6.71□□□□□ -1.34
SPG11-204ENST00000557866 ST3GAL4Q11206 333 aa6.71□□□□□ -1.34
SPG11-204ENST00000557866 TOMM34Q15785 309 aaPredicted RBP6.71□□□□□ -1.34
SPG11-204ENST00000557866 CSRP2Q16527 193 aa6.71□□□□□ -1.34
SPG11-204ENST00000557866 SNAPC1Q16533 368 aa6.71□□□□□ -1.34
SPG11-204ENST00000557866 SYT14P1Q58G82 188 aa6.71□□□□□ -1.34
SPG11-204ENST00000557866 GPR107Q5VW38 600 aa6.71□□□□□ -1.34
SPG11-204ENST00000557866 WBP2NLQ6ICG8 309 aa6.71□□□□□ -1.34
SPG11-204ENST00000557866 SLC27A4Q6P1M0 643 aa6.71□□□□□ -1.34
SPG11-204ENST00000557866 DHRS13Q6UX07 377 aa6.71□□□□□ -1.34
SPG11-204ENST00000557866 C6orf15Q6UXA7 325 aaPredicted RBP6.71□□□□□ -1.34
SPG11-204ENST00000557866 CASP12Q6UXS9 341 aa6.71□□□□□ -1.34
SPG11-204ENST00000557866 RAB11FIP2Q7L804 512 aa6.71□□□□□ -1.34
SPG11-204ENST00000557866 SLC46A3Q7Z3Q1 461 aa6.71□□□□□ -1.34
SPG11-204ENST00000557866 OR5M3Q8NGP4 307 aa6.71□□□□□ -1.34
SPG11-204ENST00000557866 OR2Y1Q8NGV0 311 aa6.71□□□□□ -1.34
SPG11-204ENST00000557866 ELP5Q8TE02 316 aa6.71□□□□□ -1.34
SPG11-204ENST00000557866 DNAJA4Q8WW22 397 aaPredicted RBP6.71□□□□□ -1.34
SPG11-204ENST00000557866 NMD3Q96D46 503 aaKnown RBP6.71□□□□□ -1.34
SPG11-204ENST00000557866 BPIFA2Q96DR5 249 aa6.71□□□□□ -1.34
SPG11-204ENST00000557866 LIN37Q96GY3 246 aaPredicted RBP6.71□□□□□ -1.34
SPG11-204ENST00000557866 LRR1Q96L50 414 aa6.71□□□□□ -1.34
SPG11-204ENST00000557866 FRMD6Q96NE9 622 aa6.71□□□□□ -1.34
SPG11-204ENST00000557866 TAAR9Q96RI9 348 aa6.71□□□□□ -1.34
SPG11-204ENST00000557866 TNFRSF13CQ96RJ3 184 aa6.71□□□□□ -1.34
SPG11-204ENST00000557866 DOK1Q99704 481 aa6.71□□□□□ -1.34
SPG11-204ENST00000557866 OR52D1Q9H346 318 aa6.71□□□□□ -1.34
SPG11-204ENST00000557866 UBQLN3Q9H347 655 aa6.71□□□□□ -1.34
SPG11-204ENST00000557866 MCCC2Q9HCC0 563 aa6.71□□□□□ -1.34
SPG11-204ENST00000557866 HHATLQ9HCP6 504 aa6.71□□□□□ -1.34
SPG11-204ENST00000557866 CCNB1IP1Q9NPC3 277 aa6.71□□□□□ -1.34
SPG11-204ENST00000557866 KRCC1Q9NPI7 259 aaPredicted RBP6.71□□□□□ -1.34
SPG11-204ENST00000557866 TBC1D23Q9NUY8 699 aa6.71□□□□□ -1.34
SPG11-204ENST00000557866 TAS2R16Q9NYV7 291 aa6.71□□□□□ -1.34
SPG11-204ENST00000557866 CNOT2Q9NZN8 540 aaKnown RBP6.71□□□□□ -1.34
SPG11-204ENST00000557866 FOXJ2Q9P0K8 574 aa6.71□□□□□ -1.34
SPG11-204ENST00000557866 RPS6KB2Q9UBS0 482 aa6.71□□□□□ -1.34
SPG11-204ENST00000557866 RSL24D1Q9UHA3 163 aaKnown RBP6.71□□□□□ -1.34
SPG11-204ENST00000557866 SIGLEC7Q9Y286 467 aa6.71□□□□□ -1.34
SPG11-204ENST00000557866 TMEM5Q9Y2B1 443 aa6.71□□□□□ -1.34
SPG11-204ENST00000557866 GPR52Q9Y2T5 361 aa6.71□□□□□ -1.34
SPG11-204ENST00000557866 PCDHGA1Q9Y5H4 931 aa6.71□□□□□ -1.34
SPG11-204ENST00000557866 SNX5Q9Y5X3 404 aa6.71□□□□□ -1.34
SPG11-204ENST00000557866 NINQ8N4C6 2090 aa6.71□□□□□ -1.34
SPG11-204ENST00000557866 TRAV27A0A087WT01 109 aa6.7□□□□□ -1.34
SPG11-204ENST00000557866 A0A1W2PQ72 361 aa6.7□□□□□ -1.34
SPG11-204ENST00000557866 EFCAB10A6NFE3 127 aa6.7□□□□□ -1.34
SPG11-204ENST00000557866 CCDC160A6NGH7 325 aa6.7□□□□□ -1.34
SPG11-204ENST00000557866 TRIM64BA6NI03 449 aa6.7□□□□□ -1.34
SPG11-204ENST00000557866 VGLL3A8MV65 326 aa6.7□□□□□ -1.34
SPG11-204ENST00000557866 ZNF99A8MXY4 864 aaPredicted RBP6.7□□□□□ -1.34
SPG11-204ENST00000557866 PLD2O14939 933 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms