RNA–Protein interactions for RNA: ENST00000557740.5

SHMT2-235, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-235ENST00000557740 ABCD4O14678 606 aa12.91□□□□□ -0.34
SHMT2-235ENST00000557740 RAMP1O60894 148 aa12.91□□□□□ -0.34
SHMT2-235ENST00000557740 ADAM11O75078 769 aa12.91□□□□□ -0.34
SHMT2-235ENST00000557740 PGM3O95394 542 aa12.91□□□□□ -0.34
SHMT2-235ENST00000557740 KRT75O95678 551 aa12.91□□□□□ -0.34
SHMT2-235ENST00000557740 C1QCP02747 245 aa12.91□□□□□ -0.34
SHMT2-235ENST00000557740 GSNP06396 782 aa12.91□□□□□ -0.34
SHMT2-235ENST00000557740 KITP10721 976 aa12.91□□□□□ -0.34
SHMT2-235ENST00000557740 IDO1P14902 403 aa12.91□□□□□ -0.34
SHMT2-235ENST00000557740 IL7RP16871 459 aa12.91□□□□□ -0.34
SHMT2-235ENST00000557740 TACR3P29371 465 aa12.91□□□□□ -0.34
SHMT2-235ENST00000557740 IL12AP29459 219 aa12.91□□□□□ -0.34
SHMT2-235ENST00000557740 IDUAP35475 653 aa12.91□□□□□ -0.34
SHMT2-235ENST00000557740 CDKN2CP42773 168 aa12.91□□□□□ -0.34
SHMT2-235ENST00000557740 SLC16A1P53985 500 aa12.91□□□□□ -0.34
SHMT2-235ENST00000557740 PLAURQ03405 335 aa12.91□□□□□ -0.34
SHMT2-235ENST00000557740 PGGHGQ32M88 737 aa12.91□□□□□ -0.34
SHMT2-235ENST00000557740 NXNQ6DKJ4 435 aa12.91□□□□□ -0.34
SHMT2-235ENST00000557740 KLHL17Q6TDP4 642 aa12.91□□□□□ -0.34
SHMT2-235ENST00000557740 TMEM108Q6UXF1 575 aa12.91□□□□□ -0.34
SHMT2-235ENST00000557740 DNAJC14Q6Y2X3 702 aaPredicted RBP12.91□□□□□ -0.34
SHMT2-235ENST00000557740 CCDC103Q8IW40 242 aa12.91□□□□□ -0.34
SHMT2-235ENST00000557740 GLB1L3Q8NCI6 653 aaPredicted RBP12.91□□□□□ -0.34
SHMT2-235ENST00000557740 OR52N5Q8NH56 324 aa12.91□□□□□ -0.34
SHMT2-235ENST00000557740 MGARPQ8TDB4 240 aa12.91□□□□□ -0.34
SHMT2-235ENST00000557740 PMM1Q92871 262 aa12.91□□□□□ -0.34
SHMT2-235ENST00000557740 HS6ST2Q96MM7 605 aa12.91□□□□□ -0.34
SHMT2-235ENST00000557740 WDR55Q9H6Y2 383 aaPredicted RBP12.91□□□□□ -0.34
SHMT2-235ENST00000557740 MTHFD2LQ9H903 347 aaPredicted RBP12.91□□□□□ -0.34
SHMT2-235ENST00000557740 THAP1Q9NVV9 213 aa12.91□□□□□ -0.34
SHMT2-235ENST00000557740 TAS2R16Q9NYV7 291 aa12.91□□□□□ -0.34
SHMT2-235ENST00000557740 CISD1Q9NZ45 108 aaKnown RBP12.91□□□□□ -0.34
SHMT2-235ENST00000557740 NPAP1Q9NZP6 1156 aa12.91□□□□□ -0.34
SHMT2-235ENST00000557740 TMEM181Q9P2C4 612 aa12.91□□□□□ -0.34
SHMT2-235ENST00000557740 MALT1Q9UDY8 824 aa12.91□□□□□ -0.34
SHMT2-235ENST00000557740 OSGIN1Q9UJX0 560 aa12.91□□□□□ -0.34
SHMT2-235ENST00000557740 POU2F3Q9UKI9 436 aa12.91□□□□□ -0.34
SHMT2-235ENST00000557740 RAB21Q9UL25 225 aa12.91□□□□□ -0.34
SHMT2-235ENST00000557740 TRAPPC4Q9Y296 219 aa12.91□□□□□ -0.34
SHMT2-235ENST00000557740 GPR45Q9Y5Y3 372 aa12.91□□□□□ -0.34
SHMT2-235ENST00000557740 TMEM72A0PK05 275 aa12.9□□□□□ -0.34
SHMT2-235ENST00000557740 RNF223E7ERA6 249 aa12.9□□□□□ -0.34
SHMT2-235ENST00000557740 FAAHO00519 579 aa12.9□□□□□ -0.34
SHMT2-235ENST00000557740 RFXANKO14593 260 aa12.9□□□□□ -0.34
SHMT2-235ENST00000557740 ZNF208O43345 1280 aa12.9□□□□□ -0.34
SHMT2-235ENST00000557740 EIF1BO60739 113 aaKnown RBP12.9□□□□□ -0.34
SHMT2-235ENST00000557740 DBIP07108 87 aaKnown RBP12.9□□□□□ -0.34
SHMT2-235ENST00000557740 RPS4Y1P22090 263 aaKnown RBP12.9□□□□□ -0.34
SHMT2-235ENST00000557740 SLC1A3P43003 542 aa12.9□□□□□ -0.34
SHMT2-235ENST00000557740 ZNF83P51522 516 aa12.9□□□□□ -0.34
SHMT2-235ENST00000557740 SLC35A1P78382 337 aa12.9□□□□□ -0.34
SHMT2-235ENST00000557740 EPS8Q12929 822 aa12.9□□□□□ -0.34
SHMT2-235ENST00000557740 COX20Q5RI15 118 aa12.9□□□□□ -0.34
SHMT2-235ENST00000557740 MRPL2Q5T653 305 aaKnown RBP12.9□□□□□ -0.34
SHMT2-235ENST00000557740 ATG16L1Q676U5 607 aa12.9□□□□□ -0.34
SHMT2-235ENST00000557740 PEX5LQ8IYB4 626 aa12.9□□□□□ -0.34
SHMT2-235ENST00000557740 ZNF440Q8IYI8 595 aa12.9□□□□□ -0.34
SHMT2-235ENST00000557740 PIAS4Q8N2W9 510 aaPredicted RBP12.9□□□□□ -0.34
SHMT2-235ENST00000557740 RADILQ96JH8 1075 aa12.9□□□□□ -0.34
SHMT2-235ENST00000557740 NAA11Q9BSU3 229 aaPredicted RBP12.9□□□□□ -0.34
SHMT2-235ENST00000557740 TRAF4Q9BUZ4 470 aaPredicted RBP12.9□□□□□ -0.34
SHMT2-235ENST00000557740 CACYBPQ9HB71 228 aaKnown RBP12.9□□□□□ -0.34
SHMT2-235ENST00000557740 BARX1Q9HBU1 254 aaPredicted RBP12.9□□□□□ -0.34
SHMT2-235ENST00000557740 P2RX2Q9UBL9 471 aa12.9□□□□□ -0.34
SHMT2-235ENST00000557740 MGAT4BQ9UQ53 548 aa12.9□□□□□ -0.34
SHMT2-235ENST00000557740 SLC9A8Q9Y2E8 581 aa12.9□□□□□ -0.34
SHMT2-235ENST00000557740 SLCO1B7G3V0H7 640 aa12.89□□□□□ -0.35
SHMT2-235ENST00000557740 SNNO75324 88 aaPredicted RBP12.89□□□□□ -0.35
SHMT2-235ENST00000557740 IGHV4-39P01824 125 aa12.89□□□□□ -0.35
SHMT2-235ENST00000557740 IL6P05231 212 aa12.89□□□□□ -0.35
SHMT2-235ENST00000557740 ACVR1BP36896 505 aa12.89□□□□□ -0.35
SHMT2-235ENST00000557740 CRATP43155 626 aa12.89□□□□□ -0.35
SHMT2-235ENST00000557740 MAP2K6P52564 334 aa12.89□□□□□ -0.35
SHMT2-235ENST00000557740 WDR4P57081 412 aaKnown RBP12.89□□□□□ -0.35
SHMT2-235ENST00000557740 LIN52Q52LA3 116 aa12.89□□□□□ -0.35
SHMT2-235ENST00000557740 PDCD4Q53EL6 469 aaKnown RBP12.89□□□□□ -0.35
SHMT2-235ENST00000557740 AGAP6Q5VW22 663 aa12.89□□□□□ -0.35
SHMT2-235ENST00000557740 OR7E24Q6IFN5 339 aa12.89□□□□□ -0.35
SHMT2-235ENST00000557740 SLC22A25Q6T423 547 aa12.89□□□□□ -0.35
SHMT2-235ENST00000557740 DTX2Q86UW9 622 aa12.89□□□□□ -0.35
SHMT2-235ENST00000557740 SLCO5A1Q9H2Y9 848 aa12.89□□□□□ -0.35
SHMT2-235ENST00000557740 PARPBPQ9NWS1 579 aa12.89□□□□□ -0.35
SHMT2-235ENST00000557740 NKIRAS1Q9NYS0 192 aa12.89□□□□□ -0.35
SHMT2-235ENST00000557740 CALML5Q9NZT1 146 aa12.89□□□□□ -0.35
SHMT2-235ENST00000557740 UPB1Q9UBR1 384 aa12.89□□□□□ -0.35
SHMT2-235ENST00000557740 A0A1W2PR80 420 aa12.88□□□□□ -0.35
SHMT2-235ENST00000557740 M0R1B8 84 aa12.88□□□□□ -0.35
SHMT2-235ENST00000557740 SLC22A3O75751 556 aa12.88□□□□□ -0.35
SHMT2-235ENST00000557740 ANP32DO95626 131 aa12.88□□□□□ -0.35
SHMT2-235ENST00000557740 BCHEP06276 602 aa12.88□□□□□ -0.35
SHMT2-235ENST00000557740 GPIP06744 558 aa12.88□□□□□ -0.35
SHMT2-235ENST00000557740 ITGA5P08648 1049 aa12.88□□□□□ -0.35
SHMT2-235ENST00000557740 IMPDH2P12268 514 aa12.88□□□□□ -0.35
SHMT2-235ENST00000557740 CXCR1P25024 350 aa12.88□□□□□ -0.35
SHMT2-235ENST00000557740 PTAFRP25105 342 aa12.88□□□□□ -0.35
SHMT2-235ENST00000557740 CRISP3P54108 245 aa12.88□□□□□ -0.35
SHMT2-235ENST00000557740 COPZ1P61923 177 aa12.88□□□□□ -0.35
SHMT2-235ENST00000557740 DMTNQ08495 405 aa12.88□□□□□ -0.35
SHMT2-235ENST00000557740 PAQR6Q6TCH4 344 aa12.88□□□□□ -0.35
SHMT2-235ENST00000557740 DEPDC4Q8N2C3 294 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms