RNA–Protein interactions for RNA: ENST00000557685.5

EFCAB11-213, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 3

Gene EFCAB11, Length 698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-213ENST00000557685 RPRD1AQ96P16 312 aaPredicted RBP3.09□□□□□ -1.91
EFCAB11-213ENST00000557685 TECTBQ96PL2 329 aa3.09□□□□□ -1.91
EFCAB11-213ENST00000557685 TBX15Q96SF7 602 aa3.09□□□□□ -1.91
EFCAB11-213ENST00000557685 SECISBP2Q96T21 854 aaKnown RBP3.09□□□□□ -1.91
EFCAB11-213ENST00000557685 NPAS2Q99743 824 aa3.09□□□□□ -1.91
EFCAB11-213ENST00000557685 SLC39A3Q9BRY0 314 aa3.09□□□□□ -1.91
EFCAB11-213ENST00000557685 VCPKMTQ9H867 229 aa3.09□□□□□ -1.91
EFCAB11-213ENST00000557685 IL17CQ9P0M4 197 aa3.09□□□□□ -1.91
EFCAB11-213ENST00000557685 ABCG2Q9UNQ0 655 aa3.09□□□□□ -1.91
EFCAB11-213ENST00000557685 COPS3Q9UNS2 423 aa3.09□□□□□ -1.91
EFCAB11-213ENST00000557685 A0A0G2JRQ6 117 aa3.08□□□□□ -1.92
EFCAB11-213ENST00000557685 HELTA6NFD8 242 aa3.08□□□□□ -1.92
EFCAB11-213ENST00000557685 CXCL11O14625 94 aa3.08□□□□□ -1.92
EFCAB11-213ENST00000557685 HCRTR1O43613 425 aa3.08□□□□□ -1.92
EFCAB11-213ENST00000557685 OPN1MWP04001 364 aa3.08□□□□□ -1.92
EFCAB11-213ENST00000557685 OPN1MW2P0DN77 364 aa3.08□□□□□ -1.92
EFCAB11-213ENST00000557685 OPN1MW3P0DN78 364 aa3.08□□□□□ -1.92
EFCAB11-213ENST00000557685 PCMT1P22061 227 aa3.08□□□□□ -1.92
EFCAB11-213ENST00000557685 GNA11P29992 359 aa3.08□□□□□ -1.92
EFCAB11-213ENST00000557685 RFC4P35249 363 aa3.08□□□□□ -1.92
EFCAB11-213ENST00000557685 BIDP55957 195 aa3.08□□□□□ -1.92
EFCAB11-213ENST00000557685 LYZP61626 148 aa3.08□□□□□ -1.92
EFCAB11-213ENST00000557685 NDPQ00604 133 aa3.08□□□□□ -1.92
EFCAB11-213ENST00000557685 C11orf71Q6IPW1 123 aa3.08□□□□□ -1.92
EFCAB11-213ENST00000557685 ZNF544Q6NX49 715 aa3.08□□□□□ -1.92
EFCAB11-213ENST00000557685 FAM220AQ7Z4H9 259 aa3.08□□□□□ -1.92
EFCAB11-213ENST00000557685 VRK2Q86Y07 508 aa3.08□□□□□ -1.92
EFCAB11-213ENST00000557685 C11orf53Q8IXP5 236 aa3.08□□□□□ -1.92
EFCAB11-213ENST00000557685 CCDC65Q8IXS2 484 aa3.08□□□□□ -1.92
EFCAB11-213ENST00000557685 CCDC71LQ8N9Z2 235 aa3.08□□□□□ -1.92
EFCAB11-213ENST00000557685 MFSD9Q8NBP5 474 aa3.08□□□□□ -1.92
EFCAB11-213ENST00000557685 DNAJA4Q8WW22 397 aaPredicted RBP3.08□□□□□ -1.92
EFCAB11-213ENST00000557685 PHYHIPLQ96FC7 376 aa3.08□□□□□ -1.92
EFCAB11-213ENST00000557685 ZBTB18Q99592 522 aa3.08□□□□□ -1.92
EFCAB11-213ENST00000557685 SELENOIQ9C0D9 397 aa3.08□□□□□ -1.92
EFCAB11-213ENST00000557685 MAGT1Q9H0U3 335 aa3.08□□□□□ -1.92
EFCAB11-213ENST00000557685 REEP4Q9H6H4 257 aa3.08□□□□□ -1.92
EFCAB11-213ENST00000557685 SH2D2AQ9NP31 389 aa3.08□□□□□ -1.92
EFCAB11-213ENST00000557685 BTNL2Q9UIR0 455 aa3.08□□□□□ -1.92
EFCAB11-213ENST00000557685 IFT52Q9Y366 437 aa3.08□□□□□ -1.92
EFCAB11-213ENST00000557685 UGT2A1Q9Y4X1 527 aa3.08□□□□□ -1.92
EFCAB11-213ENST00000557685 TTC21BQ7Z4L5 1316 aa3.08□□□□□ -1.92
EFCAB11-213ENST00000557685 SH3TC1Q8TE82 1336 aa3.08□□□□□ -1.92
EFCAB11-213ENST00000557685 KANK1Q14678 1352 aa3.08□□□□□ -1.92
EFCAB11-213ENST00000557685 ARHGAP23Q9P227 1491 aa3.08□□□□□ -1.92
EFCAB11-213ENST00000557685 DCTN6O00399 190 aa3.07□□□□□ -1.92
EFCAB11-213ENST00000557685 ATP5LO75964 103 aa3.07□□□□□ -1.92
EFCAB11-213ENST00000557685 LGI1O95970 557 aa3.07□□□□□ -1.92
EFCAB11-213ENST00000557685 IGHDP01880 384 aa3.07□□□□□ -1.92
EFCAB11-213ENST00000557685 SSR1P43307 286 aaKnown RBP3.07□□□□□ -1.92
EFCAB11-213ENST00000557685 MAGEA8P43361 318 aa3.07□□□□□ -1.92
EFCAB11-213ENST00000557685 NOVP48745 357 aa3.07□□□□□ -1.92
EFCAB11-213ENST00000557685 DUSP3P51452 185 aaPredicted RBP3.07□□□□□ -1.92
EFCAB11-213ENST00000557685 CRYBB1P53674 252 aaPredicted RBP3.07□□□□□ -1.92
EFCAB11-213ENST00000557685 PKNOX1P55347 436 aa3.07□□□□□ -1.92
EFCAB11-213ENST00000557685 ASPHQ12797 758 aa3.07□□□□□ -1.92
EFCAB11-213ENST00000557685 ORC2Q13416 577 aaPredicted RBP3.07□□□□□ -1.92
EFCAB11-213ENST00000557685 GRB7Q14451 532 aa3.07□□□□□ -1.92
EFCAB11-213ENST00000557685 NSUN5P1Q3KNT7 163 aa3.07□□□□□ -1.92
EFCAB11-213ENST00000557685 OTPQ5XKR4 325 aa3.07□□□□□ -1.92
EFCAB11-213ENST00000557685 FTMTQ8N4E7 242 aa3.07□□□□□ -1.92
EFCAB11-213ENST00000557685 LINC01006Q8NI28 216 aa3.07□□□□□ -1.92
EFCAB11-213ENST00000557685 C7orf33Q8WU49 177 aa3.07□□□□□ -1.92
EFCAB11-213ENST00000557685 SCFD1Q8WVM8 642 aa3.07□□□□□ -1.92
EFCAB11-213ENST00000557685 SLC38A2Q96QD8 506 aa3.07□□□□□ -1.92
EFCAB11-213ENST00000557685 HIST1H4GQ99525 98 aa3.07□□□□□ -1.92
EFCAB11-213ENST00000557685 ARHGDIGQ99819 225 aa3.07□□□□□ -1.92
EFCAB11-213ENST00000557685 EBF4Q9BQW3 602 aa3.07□□□□□ -1.92
EFCAB11-213ENST00000557685 SUDS3Q9H7L9 328 aaPredicted RBP3.07□□□□□ -1.92
EFCAB11-213ENST00000557685 NHEJ1Q9H9Q4 299 aaPredicted RBP3.07□□□□□ -1.92
EFCAB11-213ENST00000557685 FN3KRPQ9HA64 309 aa3.07□□□□□ -1.92
EFCAB11-213ENST00000557685 FOLH1BQ9HBA9 442 aa3.07□□□□□ -1.92
EFCAB11-213ENST00000557685 MCCC2Q9HCC0 563 aa3.07□□□□□ -1.92
EFCAB11-213ENST00000557685 PLSCR3Q9NRY6 295 aa3.07□□□□□ -1.92
EFCAB11-213ENST00000557685 ADAM28Q9UKQ2 775 aa3.07□□□□□ -1.92
EFCAB11-213ENST00000557685 FAM240BA0A1B0GVZ2 78 aa3.06□□□□□ -1.92
EFCAB11-213ENST00000557685 SNTNA6NMZ2 147 aa3.06□□□□□ -1.92
EFCAB11-213ENST00000557685 A8MU10 97 aa3.06□□□□□ -1.92
EFCAB11-213ENST00000557685 HIP1O00291 1037 aa3.06□□□□□ -1.92
EFCAB11-213ENST00000557685 MPHOSPH10O00566 681 aaKnown RBP3.06□□□□□ -1.92
EFCAB11-213ENST00000557685 NBR2O15453 112 aa3.06□□□□□ -1.92
EFCAB11-213ENST00000557685 RGS16O15492 202 aaPredicted RBP3.06□□□□□ -1.92
EFCAB11-213ENST00000557685 UGT1A9O60656 530 aa3.06□□□□□ -1.92
EFCAB11-213ENST00000557685 FCMRO60667 390 aa3.06□□□□□ -1.92
EFCAB11-213ENST00000557685 RAMP3O60896 148 aa3.06□□□□□ -1.92
EFCAB11-213ENST00000557685 MMP23AO75900 390 aa3.06□□□□□ -1.92
EFCAB11-213ENST00000557685 DIRAS1O95057 198 aa3.06□□□□□ -1.92
EFCAB11-213ENST00000557685 NCK1P16333 377 aa3.06□□□□□ -1.92
EFCAB11-213ENST00000557685 HMGB2P26583 209 aaKnown RBP3.06□□□□□ -1.92
EFCAB11-213ENST00000557685 CCR1P32246 355 aa3.06□□□□□ -1.92
EFCAB11-213ENST00000557685 UGT1A5P35504 534 aa3.06□□□□□ -1.92
EFCAB11-213ENST00000557685 DDOSTP39656 456 aa3.06□□□□□ -1.92
EFCAB11-213ENST00000557685 CSNK1G2P78368 415 aa3.06□□□□□ -1.92
EFCAB11-213ENST00000557685 TNFRSF17Q02223 184 aa3.06□□□□□ -1.92
EFCAB11-213ENST00000557685 VGLL4Q14135 290 aa3.06□□□□□ -1.92
EFCAB11-213ENST00000557685 ZNF79Q15937 498 aa3.06□□□□□ -1.92
EFCAB11-213ENST00000557685 CCDC14Q49A88 953 aa3.06□□□□□ -1.92
EFCAB11-213ENST00000557685 TRIM69Q86WT6 500 aa3.06□□□□□ -1.92
EFCAB11-213ENST00000557685 OR2L5Q8NG80 312 aa3.06□□□□□ -1.92
EFCAB11-213ENST00000557685 OR52I1Q8NGK6 324 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms