RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 SPOCK1Q08629 439 aa5.16□□□□□ -1.58
VPS33B-207ENST00000557470 C17orf67Q0P5P2 114 aa5.16□□□□□ -1.58
VPS33B-207ENST00000557470 ITGADQ13349 1161 aa5.16□□□□□ -1.58
VPS33B-207ENST00000557470 NAB1Q13506 487 aa5.16□□□□□ -1.58
VPS33B-207ENST00000557470 P2RY6Q15077 328 aa5.16□□□□□ -1.58
VPS33B-207ENST00000557470 PPA1Q15181 289 aa5.16□□□□□ -1.58
VPS33B-207ENST00000557470 GPR68Q15743 365 aa5.16□□□□□ -1.58
VPS33B-207ENST00000557470 TBCEQ15813 527 aaPredicted RBP5.16□□□□□ -1.58
VPS33B-207ENST00000557470 STK11Q15831 433 aa5.16□□□□□ -1.58
VPS33B-207ENST00000557470 FAM120AOSQ5T036 256 aa5.16□□□□□ -1.58
VPS33B-207ENST00000557470 CPTPQ5TA50 214 aa5.16□□□□□ -1.58
VPS33B-207ENST00000557470 AGAP6Q5VW22 663 aa5.16□□□□□ -1.58
VPS33B-207ENST00000557470 TMEM107Q6UX40 140 aa5.16□□□□□ -1.58
VPS33B-207ENST00000557470 BHLHA15Q7RTS1 189 aaPredicted RBP5.16□□□□□ -1.58
VPS33B-207ENST00000557470 CCDC25Q86WR0 208 aa5.16□□□□□ -1.58
VPS33B-207ENST00000557470 TDRPQ86YL5 185 aa5.16□□□□□ -1.58
VPS33B-207ENST00000557470 WFDC3Q8IUB2 231 aa5.16□□□□□ -1.58
VPS33B-207ENST00000557470 OR2L13Q8N349 312 aa5.16□□□□□ -1.58
VPS33B-207ENST00000557470 C17orf53Q8N3J3 647 aaPredicted RBP5.16□□□□□ -1.58
VPS33B-207ENST00000557470 GATSQ8NAP1 163 aa5.16□□□□□ -1.58
VPS33B-207ENST00000557470 POC1BQ8TC44 478 aa5.16□□□□□ -1.58
VPS33B-207ENST00000557470 C10orf105Q8TEF2 133 aa5.16□□□□□ -1.58
VPS33B-207ENST00000557470 ZNF483Q8TF39 744 aaPredicted RBP5.16□□□□□ -1.58
VPS33B-207ENST00000557470 C16orf78Q8WTQ4 265 aa5.16□□□□□ -1.58
VPS33B-207ENST00000557470 FAM168AQ92567 244 aa5.16□□□□□ -1.58
VPS33B-207ENST00000557470 ZBTB8AQ96BR9 441 aa5.16□□□□□ -1.58
VPS33B-207ENST00000557470 KLHL15Q96M94 604 aa5.16□□□□□ -1.58
VPS33B-207ENST00000557470 BBS4Q96RK4 519 aa5.16□□□□□ -1.58
VPS33B-207ENST00000557470 LMF2Q9BU23 707 aaKnown RBP5.16□□□□□ -1.58
VPS33B-207ENST00000557470 EBPLQ9BY08 206 aa5.16□□□□□ -1.58
VPS33B-207ENST00000557470 ACPTQ9BZG2 426 aa5.16□□□□□ -1.58
VPS33B-207ENST00000557470 CHODLQ9H9P2 273 aa5.16□□□□□ -1.58
VPS33B-207ENST00000557470 Q9N2J8 555 aa5.16□□□□□ -1.58
VPS33B-207ENST00000557470 MED17Q9NVC6 651 aa5.16□□□□□ -1.58
VPS33B-207ENST00000557470 DDX18Q9NVP1 670 aaKnown RBP5.16□□□□□ -1.58
VPS33B-207ENST00000557470 NMRK1Q9NWW6 199 aa5.16□□□□□ -1.58
VPS33B-207ENST00000557470 GRHL1Q9NZI5 618 aa5.16□□□□□ -1.58
VPS33B-207ENST00000557470 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.16□□□□□ -1.58
VPS33B-207ENST00000557470 KLHL13Q9P2N7 655 aa5.16□□□□□ -1.58
VPS33B-207ENST00000557470 RABL2AQ9UBK7 228 aaPredicted RBP5.16□□□□□ -1.58
VPS33B-207ENST00000557470 VPS29Q9UBQ0 182 aa5.16□□□□□ -1.58
VPS33B-207ENST00000557470 SNX6Q9UNH7 406 aa5.16□□□□□ -1.58
VPS33B-207ENST00000557470 U3KQE9 123 aa5.16□□□□□ -1.58
VPS33B-207ENST00000557470 TGP01266 2768 aa5.16□□□□□ -1.58
VPS33B-207ENST00000557470 GOLGA8QA0A0J9YX86 632 aa5.15□□□□□ -1.59
VPS33B-207ENST00000557470 GOLGA8OA6NCC3 632 aa5.15□□□□□ -1.59
VPS33B-207ENST00000557470 MYO1GB0I1T2 1018 aa5.15□□□□□ -1.59
VPS33B-207ENST00000557470 GOLGA8NF8WBI6 632 aa5.15□□□□□ -1.59
VPS33B-207ENST00000557470 CCDC188H7C350 402 aa5.15□□□□□ -1.59
VPS33B-207ENST00000557470 GOLGA8RI6L899 631 aa5.15□□□□□ -1.59
VPS33B-207ENST00000557470 ATP8B1O43520 1251 aa5.15□□□□□ -1.59
VPS33B-207ENST00000557470 NPHS1O60500 1241 aa5.15□□□□□ -1.59
VPS33B-207ENST00000557470 SLC22A3O75751 556 aa5.15□□□□□ -1.59
VPS33B-207ENST00000557470 LY6HO94772 140 aa5.15□□□□□ -1.59
VPS33B-207ENST00000557470 TPPPO94811 219 aa5.15□□□□□ -1.59
VPS33B-207ENST00000557470 OR4F21O95013 312 aa5.15□□□□□ -1.59
VPS33B-207ENST00000557470 OXSR1O95747 527 aaPredicted RBP5.15□□□□□ -1.59
VPS33B-207ENST00000557470 CLEC3BP05452 202 aa5.15□□□□□ -1.59
VPS33B-207ENST00000557470 PABPC4LP0CB38 370 aaKnown RBP5.15□□□□□ -1.59
VPS33B-207ENST00000557470 DDCP20711 480 aa5.15□□□□□ -1.59
VPS33B-207ENST00000557470 USF1P22415 310 aaPredicted RBP5.15□□□□□ -1.59
VPS33B-207ENST00000557470 EDNRAP25101 427 aa5.15□□□□□ -1.59
VPS33B-207ENST00000557470 TYK2P29597 1187 aa5.15□□□□□ -1.59
VPS33B-207ENST00000557470 TIA1P31483 386 aaKnown RBP eCLIP5.15□□□□□ -1.59
VPS33B-207ENST00000557470 TTKP33981 857 aa5.15□□□□□ -1.59
VPS33B-207ENST00000557470 GABRA3P34903 492 aa5.15□□□□□ -1.59
VPS33B-207ENST00000557470 PAFAH1B1P43034 410 aa5.15□□□□□ -1.59
VPS33B-207ENST00000557470 MAGEA4P43358 317 aa5.15□□□□□ -1.59
VPS33B-207ENST00000557470 SERPINB8P50452 374 aa5.15□□□□□ -1.59
VPS33B-207ENST00000557470 PSMD4P55036 377 aaKnown RBP5.15□□□□□ -1.59
VPS33B-207ENST00000557470 CDH13P55290 713 aa5.15□□□□□ -1.59
VPS33B-207ENST00000557470 SLC18A2Q05940 514 aa5.15□□□□□ -1.59
VPS33B-207ENST00000557470 ACSM2AQ08AH3 577 aa5.15□□□□□ -1.59
VPS33B-207ENST00000557470 FOXF1Q12946 379 aa5.15□□□□□ -1.59
VPS33B-207ENST00000557470 CALCOCO2Q13137 446 aa5.15□□□□□ -1.59
VPS33B-207ENST00000557470 HEPACAMQ14CZ8 416 aa5.15□□□□□ -1.59
VPS33B-207ENST00000557470 RAB35Q15286 201 aa5.15□□□□□ -1.59
VPS33B-207ENST00000557470 RNPS1Q15287 305 aaKnown RBP5.15□□□□□ -1.59
VPS33B-207ENST00000557470 SEC23BQ15437 767 aa5.15□□□□□ -1.59
VPS33B-207ENST00000557470 ZNHIT3Q15649 155 aaPredicted RBP5.15□□□□□ -1.59
VPS33B-207ENST00000557470 ADIPOQQ15848 244 aa5.15□□□□□ -1.59
VPS33B-207ENST00000557470 ZNF674Q2M3X9 581 aa5.15□□□□□ -1.59
VPS33B-207ENST00000557470 PDSS1Q5T2R2 415 aa5.15□□□□□ -1.59
VPS33B-207ENST00000557470 UBAP2Q5T6F2 1119 aaKnown RBP5.15□□□□□ -1.59
VPS33B-207ENST00000557470 ACSM2BQ68CK6 577 aa5.15□□□□□ -1.59
VPS33B-207ENST00000557470 FAM166AQ6J272 317 aa5.15□□□□□ -1.59
VPS33B-207ENST00000557470 SHQ1Q6PI26 577 aaKnown RBP5.15□□□□□ -1.59
VPS33B-207ENST00000557470 B3GLCTQ6Y288 498 aa5.15□□□□□ -1.59
VPS33B-207ENST00000557470 Q6ZSR9 355 aa5.15□□□□□ -1.59
VPS33B-207ENST00000557470 Q6ZT83 130 aa5.15□□□□□ -1.59
VPS33B-207ENST00000557470 CCDC80Q76M96 950 aa5.15□□□□□ -1.59
VPS33B-207ENST00000557470 FCRLAQ7L513 359 aa5.15□□□□□ -1.59
VPS33B-207ENST00000557470 TRABD2AQ86V40 505 aa5.15□□□□□ -1.59
VPS33B-207ENST00000557470 LILRA2Q8N149 483 aa5.15□□□□□ -1.59
VPS33B-207ENST00000557470 MUC15Q8N387 334 aa5.15□□□□□ -1.59
VPS33B-207ENST00000557470 CDYL2Q8N8U2 506 aa5.15□□□□□ -1.59
VPS33B-207ENST00000557470 OR4C3Q8NH37 302 aa5.15□□□□□ -1.59
VPS33B-207ENST00000557470 PIK3R3Q92569 461 aa5.15□□□□□ -1.59
VPS33B-207ENST00000557470 PROX1Q92786 737 aa5.15□□□□□ -1.59
VPS33B-207ENST00000557470 CPNE4Q96A23 557 aaPredicted RBP5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms