RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 RPS19P39019 145 aaKnown RBP8.31□□□□□ -1.08
SYNE3-205ENST00000557275 DAOAP59103 153 aa8.31□□□□□ -1.08
SYNE3-205ENST00000557275 ZNF678Q5SXM1 525 aa8.31□□□□□ -1.08
SYNE3-205ENST00000557275 OR5B3Q8NH48 314 aa8.31□□□□□ -1.08
SYNE3-205ENST00000557275 PDGFBP01127 241 aaPredicted RBP8.3□□□□□ -1.08
SYNE3-205ENST00000557275 ARAFP10398 606 aa8.3□□□□□ -1.08
SYNE3-205ENST00000557275 ADCYAP1R1P41586 468 aa8.3□□□□□ -1.08
SYNE3-205ENST00000557275 CARD17Q5XLA6 110 aa8.3□□□□□ -1.08
SYNE3-205ENST00000557275 TECPR1Q7Z6L1 1165 aa8.3□□□□□ -1.08
SYNE3-205ENST00000557275 SLC15A4Q8N697 577 aa8.3□□□□□ -1.08
SYNE3-205ENST00000557275 BPIFCQ8NFQ6 507 aa8.3□□□□□ -1.08
SYNE3-205ENST00000557275 UBALD1Q8TB05 177 aa8.3□□□□□ -1.08
SYNE3-205ENST00000557275 GPR62Q9BZJ7 368 aa8.3□□□□□ -1.08
SYNE3-205ENST00000557275 KCNK13Q9HB14 408 aa8.3□□□□□ -1.08
SYNE3-205ENST00000557275 SPACA1Q9HBV2 294 aa8.3□□□□□ -1.08
SYNE3-205ENST00000557275 NDRG3Q9UGV2 375 aa8.3□□□□□ -1.08
SYNE3-205ENST00000557275 CYB5R1Q9UHQ9 305 aa8.3□□□□□ -1.08
SYNE3-205ENST00000557275 MUTYHQ9UIF7 546 aa8.3□□□□□ -1.08
SYNE3-205ENST00000557275 TARBP1Q13395 1621 aaKnown RBP8.3□□□□□ -1.08
SYNE3-205ENST00000557275 KIR2DS1A0A191URI9 304 aa8.3□□□□□ -1.08
SYNE3-205ENST00000557275 AIFM1O95831 613 aa8.3□□□□□ -1.08
SYNE3-205ENST00000557275 CLDN1O95832 211 aa8.3□□□□□ -1.08
SYNE3-205ENST00000557275 STSP08842 583 aa8.3□□□□□ -1.08
SYNE3-205ENST00000557275 ACSM4P0C7M7 580 aa8.3□□□□□ -1.08
SYNE3-205ENST00000557275 CKMT1AP12532 417 aa8.3□□□□□ -1.08
SYNE3-205ENST00000557275 KIR2DS4P43632 304 aa8.3□□□□□ -1.08
SYNE3-205ENST00000557275 KIR2DS1Q14954 304 aa8.3□□□□□ -1.08
SYNE3-205ENST00000557275 C6orf89Q6UWU4 347 aa8.3□□□□□ -1.08
SYNE3-205ENST00000557275 PRSS35Q8N3Z0 413 aa8.3□□□□□ -1.08
SYNE3-205ENST00000557275 CMASQ8NFW8 434 aaPredicted RBP8.3□□□□□ -1.08
SYNE3-205ENST00000557275 KCMF1Q9P0J7 381 aa8.3□□□□□ -1.08
SYNE3-205ENST00000557275 CACNA1SQ13698 1873 aa8.3□□□□□ -1.08
SYNE3-205ENST00000557275 H7BY64 318 aa8.3□□□□□ -1.08
SYNE3-205ENST00000557275 K7ERU9 68 aa8.3□□□□□ -1.08
SYNE3-205ENST00000557275 SLC35B2Q8TB61 432 aa8.3□□□□□ -1.08
SYNE3-205ENST00000557275 SENP5Q96HI0 755 aaPredicted RBP8.3□□□□□ -1.08
SYNE3-205ENST00000557275 CMTM3Q96MX0 182 aa8.3□□□□□ -1.08
SYNE3-205ENST00000557275 SPINT2O43291 252 aa8.3□□□□□ -1.08
SYNE3-205ENST00000557275 YIF1AO95070 293 aa8.3□□□□□ -1.08
SYNE3-205ENST00000557275 PPP1R3AQ16821 1122 aa8.3□□□□□ -1.08
SYNE3-205ENST00000557275 LCN10Q6JVE6 187 aa8.3□□□□□ -1.08
SYNE3-205ENST00000557275 OPN5Q6U736 354 aa8.3□□□□□ -1.08
SYNE3-205ENST00000557275 CXCL17Q6UXB2 119 aa8.3□□□□□ -1.08
SYNE3-205ENST00000557275 HNRNPA2B1P22626 353 aaKnown RBP8.3□□□□□ -1.08
SYNE3-205ENST00000557275 TAF9BQ9HBM6 251 aa8.3□□□□□ -1.08
SYNE3-205ENST00000557275 SMIM28A0A1B0GU29 152 aa8.3□□□□□ -1.08
SYNE3-205ENST00000557275 FGF4P08620 206 aa8.3□□□□□ -1.08
SYNE3-205ENST00000557275 RTL8BQ17RB0 113 aa8.3□□□□□ -1.08
SYNE3-205ENST00000557275 TMPRSS9Q7Z410 1059 aa8.3□□□□□ -1.08
SYNE3-205ENST00000557275 C14orf80Q86SX3 495 aa8.3□□□□□ -1.08
SYNE3-205ENST00000557275 GPX8Q8TED1 209 aa8.3□□□□□ -1.08
SYNE3-205ENST00000557275 GAB2Q9UQC2 676 aa8.3□□□□□ -1.08
SYNE3-205ENST00000557275 DCDC2BA2VCK2 349 aa8.3□□□□□ -1.08
SYNE3-205ENST00000557275 CYC1P08574 325 aa8.3□□□□□ -1.08
SYNE3-205ENST00000557275 SRMP19623 302 aa8.3□□□□□ -1.08
SYNE3-205ENST00000557275 SDHBP21912 280 aa8.3□□□□□ -1.08
SYNE3-205ENST00000557275 ZNF684Q5T5D7 378 aa8.3□□□□□ -1.08
SYNE3-205ENST00000557275 ABHD17BQ5VST6 288 aa8.3□□□□□ -1.08
SYNE3-205ENST00000557275 MDGA2Q7Z553 956 aa8.3□□□□□ -1.08
SYNE3-205ENST00000557275 CDS1Q92903 461 aa8.3□□□□□ -1.08
SYNE3-205ENST00000557275 C20orf85Q9H1P6 137 aa8.3□□□□□ -1.08
SYNE3-205ENST00000557275 PLEKHF2Q9H8W4 249 aa8.3□□□□□ -1.08
SYNE3-205ENST00000557275 PREX1Q8TCU6 1659 aa8.3□□□□□ -1.08
SYNE3-205ENST00000557275 IGFBP1P08833 259 aaPredicted RBP8.3□□□□□ -1.08
SYNE3-205ENST00000557275 OR1E2P47887 323 aa8.3□□□□□ -1.08
SYNE3-205ENST00000557275 SLC35A2P78381 396 aa8.3□□□□□ -1.08
SYNE3-205ENST00000557275 FFAR4Q5NUL3 377 aa8.3□□□□□ -1.08
SYNE3-205ENST00000557275 PLCXD3Q63HM9 321 aa8.3□□□□□ -1.08
SYNE3-205ENST00000557275 RPL7L1Q6DKI1 246 aaKnown RBP8.3□□□□□ -1.08
SYNE3-205ENST00000557275 DCAF4L2Q8NA75 395 aa8.3□□□□□ -1.08
SYNE3-205ENST00000557275 HMGB4Q8WW32 186 aa8.3□□□□□ -1.08
SYNE3-205ENST00000557275 RANBP9Q96S59 729 aa8.3□□□□□ -1.08
SYNE3-205ENST00000557275 FAAP24Q9BTP7 215 aa8.3□□□□□ -1.08
SYNE3-205ENST00000557275 NKX1-2Q9UD57 310 aaPredicted RBP8.3□□□□□ -1.08
SYNE3-205ENST00000557275 SH2D7A6NKC9 451 aaPredicted RBP8.3□□□□□ -1.08
SYNE3-205ENST00000557275 HLA-DQB2P05538 268 aa8.3□□□□□ -1.08
SYNE3-205ENST00000557275 ADRA2CP18825 462 aa8.3□□□□□ -1.08
SYNE3-205ENST00000557275 TAS2R38P59533 333 aa8.3□□□□□ -1.08
SYNE3-205ENST00000557275 DMWDQ09019 674 aa8.3□□□□□ -1.08
SYNE3-205ENST00000557275 GRM7Q14831 915 aa8.3□□□□□ -1.08
SYNE3-205ENST00000557275 ZDHHC5Q9C0B5 715 aa8.3□□□□□ -1.08
SYNE3-205ENST00000557275 ACKR4Q9NPB9 350 aa8.3□□□□□ -1.08
SYNE3-205ENST00000557275 SLX4Q8IY92 1834 aa8.3□□□□□ -1.08
SYNE3-205ENST00000557275 H2AFB1P0C5Y9 115 aa8.3□□□□□ -1.08
SYNE3-205ENST00000557275 CD52P31358 61 aa8.3□□□□□ -1.08
SYNE3-205ENST00000557275 CD276Q5ZPR3 534 aa8.3□□□□□ -1.08
SYNE3-205ENST00000557275 FRMPD2BQ6IN97 320 aa8.3□□□□□ -1.08
SYNE3-205ENST00000557275 APOOLQ6UXV4 268 aa8.3□□□□□ -1.08
SYNE3-205ENST00000557275 ENTHD1Q8IYW4 607 aa8.3□□□□□ -1.08
SYNE3-205ENST00000557275 A6NDN8 102 aa8.3□□□□□ -1.08
SYNE3-205ENST00000557275 FBXO24O75426 580 aa8.3□□□□□ -1.08
SYNE3-205ENST00000557275 PTGIRP43119 386 aa8.3□□□□□ -1.08
SYNE3-205ENST00000557275 LTBQ06643 244 aa8.3□□□□□ -1.08
SYNE3-205ENST00000557275 HSD17B11Q8NBQ5 300 aa8.3□□□□□ -1.08
SYNE3-205ENST00000557275 CRB3Q9BUF7 120 aa8.3□□□□□ -1.08
SYNE3-205ENST00000557275 THSD1Q9NS62 852 aa8.3□□□□□ -1.08
SYNE3-205ENST00000557275 NECAP2Q9NVZ3 263 aa8.3□□□□□ -1.08
SYNE3-205ENST00000557275 MTCL1Q9Y4B5 1905 aaKnown RBP8.29□□□□□ -1.08
SYNE3-205ENST00000557275 CLINT1Q14677 625 aa8.29□□□□□ -1.08
SYNE3-205ENST00000557275 TCTEX1D1Q8N7M0 179 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms