RNA–Protein interactions for RNA: ENST00000557222.5

VRK1-206, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-206ENST00000557222 REV1Q9UBZ9 1251 aa7.63□□□□□ -1.19
VRK1-206ENST00000557222 BAIAP2L1Q9UHR4 511 aa7.63□□□□□ -1.19
VRK1-206ENST00000557222 PRDM4Q9UKN5 801 aa7.63□□□□□ -1.19
VRK1-206ENST00000557222 DNAJC15Q9Y5T4 150 aa7.63□□□□□ -1.19
VRK1-206ENST00000557222 SPIN1Q9Y657 262 aaPredicted RBP7.63□□□□□ -1.19
VRK1-206ENST00000557222 SVEP1Q4LDE5 3571 aa7.63□□□□□ -1.19
VRK1-206ENST00000557222 HEATR1Q9H583 2144 aaKnown RBP7.63□□□□□ -1.19
VRK1-206ENST00000557222 IGHV4-30-2A0A087WSY4 118 aa7.62□□□□□ -1.19
VRK1-206ENST00000557222 A0A1W2PPM1 405 aa7.62□□□□□ -1.19
VRK1-206ENST00000557222 FAM234BA2RU67 622 aa7.62□□□□□ -1.19
VRK1-206ENST00000557222 SERINC4A6NH21 518 aa7.62□□□□□ -1.19
VRK1-206ENST00000557222 E7EQL1 145 aa7.62□□□□□ -1.19
VRK1-206ENST00000557222 COPEO14579 308 aa7.62□□□□□ -1.19
VRK1-206ENST00000557222 ANKRD28O15084 1053 aa7.62□□□□□ -1.19
VRK1-206ENST00000557222 PHF1O43189 567 aaPredicted RBP7.62□□□□□ -1.19
VRK1-206ENST00000557222 TRIM13O60858 407 aa7.62□□□□□ -1.19
VRK1-206ENST00000557222 NDUFS7O75251 213 aa7.62□□□□□ -1.19
VRK1-206ENST00000557222 HTR3BO95264 441 aa7.62□□□□□ -1.19
VRK1-206ENST00000557222 LINC00032P0C843 101 aa7.62□□□□□ -1.19
VRK1-206ENST00000557222 PGCP20142 388 aa7.62□□□□□ -1.19
VRK1-206ENST00000557222 PAX7P23759 505 aa7.62□□□□□ -1.19
VRK1-206ENST00000557222 CD40P25942 277 aa7.62□□□□□ -1.19
VRK1-206ENST00000557222 APOBEC1P41238 236 aaKnown RBP7.62□□□□□ -1.19
VRK1-206ENST00000557222 SLC16A1P53985 500 aa7.62□□□□□ -1.19
VRK1-206ENST00000557222 IRX1P78414 480 aaPredicted RBP7.62□□□□□ -1.19
VRK1-206ENST00000557222 MPP2Q14168 576 aa7.62□□□□□ -1.19
VRK1-206ENST00000557222 QPRTQ15274 297 aa7.62□□□□□ -1.19
VRK1-206ENST00000557222 RAB35Q15286 201 aa7.62□□□□□ -1.19
VRK1-206ENST00000557222 STK11Q15831 433 aa7.62□□□□□ -1.19
VRK1-206ENST00000557222 UGT3A2Q3SY77 523 aa7.62□□□□□ -1.19
VRK1-206ENST00000557222 TIGD2Q4W5G0 525 aa7.62□□□□□ -1.19
VRK1-206ENST00000557222 CYB5R2Q6BCY4 276 aa7.62□□□□□ -1.19
VRK1-206ENST00000557222 ABLIM2Q6H8Q1 611 aa7.62□□□□□ -1.19
VRK1-206ENST00000557222 MUC15Q8N387 334 aa7.62□□□□□ -1.19
VRK1-206ENST00000557222 C17orf53Q8N3J3 647 aaPredicted RBP7.62□□□□□ -1.19
VRK1-206ENST00000557222 EIF1ADQ8N9N8 165 aaKnown RBP7.62□□□□□ -1.19
VRK1-206ENST00000557222 CCDC63Q8NA47 563 aa7.62□□□□□ -1.19
VRK1-206ENST00000557222 ATP6V1C2Q8NEY4 427 aa7.62□□□□□ -1.19
VRK1-206ENST00000557222 ZHX1-C8orf76Q96EF9 292 aa7.62□□□□□ -1.19
VRK1-206ENST00000557222 CHMP6Q96FZ7 201 aa7.62□□□□□ -1.19
VRK1-206ENST00000557222 KIRREL1Q96J84 757 aa7.62□□□□□ -1.19
VRK1-206ENST00000557222 OR5B2Q96R09 309 aa7.62□□□□□ -1.19
VRK1-206ENST00000557222 SDF2Q99470 211 aa7.62□□□□□ -1.19
VRK1-206ENST00000557222 GATA5Q9BWX5 397 aaPredicted RBP7.62□□□□□ -1.19
VRK1-206ENST00000557222 CACNG6Q9BXT2 260 aa7.62□□□□□ -1.19
VRK1-206ENST00000557222 BEX2Q9BXY8 128 aa7.62□□□□□ -1.19
VRK1-206ENST00000557222 AMBRA1Q9C0C7 1298 aa7.62□□□□□ -1.19
VRK1-206ENST00000557222 EML4Q9HC35 981 aaKnown RBP7.62□□□□□ -1.19
VRK1-206ENST00000557222 POLE3Q9NRF9 147 aa7.62□□□□□ -1.19
VRK1-206ENST00000557222 ACER3Q9NUN7 267 aa7.62□□□□□ -1.19
VRK1-206ENST00000557222 FAM53CQ9NYF3 392 aa7.62□□□□□ -1.19
VRK1-206ENST00000557222 TAS2R16Q9NYV7 291 aa7.62□□□□□ -1.19
VRK1-206ENST00000557222 NPAP1Q9NZP6 1156 aa7.62□□□□□ -1.19
VRK1-206ENST00000557222 SLAMF8Q9P0V8 285 aa7.62□□□□□ -1.19
VRK1-206ENST00000557222 MALT1Q9UDY8 824 aa7.62□□□□□ -1.19
VRK1-206ENST00000557222 TBK1Q9UHD2 729 aa7.62□□□□□ -1.19
VRK1-206ENST00000557222 PRSS50Q9UI38 385 aa7.62□□□□□ -1.19
VRK1-206ENST00000557222 HDGFL3Q9Y3E1 203 aa7.62□□□□□ -1.19
VRK1-206ENST00000557222 TRAF6Q9Y4K3 522 aa7.62□□□□□ -1.19
VRK1-206ENST00000557222 SLC25A15Q9Y619 301 aa7.62□□□□□ -1.19
VRK1-206ENST00000557222 IGHV3-15A0A0B4J1V0 119 aa7.61□□□□□ -1.19
VRK1-206ENST00000557222 CIB4A0PJX0 185 aa7.61□□□□□ -1.19
VRK1-206ENST00000557222 SULT2B1O00204 365 aa7.61□□□□□ -1.19
VRK1-206ENST00000557222 GPRIN2O60269 458 aa7.61□□□□□ -1.19
VRK1-206ENST00000557222 NPHS1O60500 1241 aa7.61□□□□□ -1.19
VRK1-206ENST00000557222 STX11O75558 287 aa7.61□□□□□ -1.19
VRK1-206ENST00000557222 H6PDO95479 791 aa7.61□□□□□ -1.19
VRK1-206ENST00000557222 PMS2P2O95744 297 aa7.61□□□□□ -1.19
VRK1-206ENST00000557222 AGR2O95994 175 aa7.61□□□□□ -1.19
VRK1-206ENST00000557222 LAMP1P11279 417 aa7.61□□□□□ -1.19
VRK1-206ENST00000557222 PRPS1L1P21108 318 aa7.61□□□□□ -1.19
VRK1-206ENST00000557222 SERPINB5P36952 375 aa7.61□□□□□ -1.19
VRK1-206ENST00000557222 GZMKP49863 264 aa7.61□□□□□ -1.19
VRK1-206ENST00000557222 DIO1P49895 249 aa7.61□□□□□ -1.19
VRK1-206ENST00000557222 MAP2K6P52564 334 aa7.61□□□□□ -1.19
VRK1-206ENST00000557222 EFNA4P52798 201 aa7.61□□□□□ -1.19
VRK1-206ENST00000557222 CASP9P55211 416 aa7.61□□□□□ -1.19
VRK1-206ENST00000557222 SESN3P58005 492 aa7.61□□□□□ -1.19
VRK1-206ENST00000557222 CHRNB3Q05901 458 aa7.61□□□□□ -1.19
VRK1-206ENST00000557222 SKP2Q13309 424 aa7.61□□□□□ -1.19
VRK1-206ENST00000557222 SPDYE7PQ495Y7 208 aa7.61□□□□□ -1.19
VRK1-206ENST00000557222 GALNTL6Q49A17 601 aa7.61□□□□□ -1.19
VRK1-206ENST00000557222 SYT14P1Q58G82 188 aa7.61□□□□□ -1.19
VRK1-206ENST00000557222 XKR7Q5GH72 579 aa7.61□□□□□ -1.19
VRK1-206ENST00000557222 SLC22A25Q6T423 547 aa7.61□□□□□ -1.19
VRK1-206ENST00000557222 EIF3MQ7L2H7 374 aaKnown RBP7.61□□□□□ -1.19
VRK1-206ENST00000557222 REC114Q7Z4M0 266 aa7.61□□□□□ -1.19
VRK1-206ENST00000557222 C10orf107Q8IVU9 208 aa7.61□□□□□ -1.19
VRK1-206ENST00000557222 C17orf78Q8N4C9 275 aa7.61□□□□□ -1.19
VRK1-206ENST00000557222 C1orf162Q8NEQ5 155 aaPredicted RBP7.61□□□□□ -1.19
VRK1-206ENST00000557222 OR7A2PQ8NGA2 310 aa7.61□□□□□ -1.19
VRK1-206ENST00000557222 CLHC1Q8NHS4 586 aa7.61□□□□□ -1.19
VRK1-206ENST00000557222 PIGXQ8TBF5 258 aa7.61□□□□□ -1.19
VRK1-206ENST00000557222 TWIST2Q8WVJ9 160 aa7.61□□□□□ -1.19
VRK1-206ENST00000557222 APH1AQ96BI3 265 aa7.61□□□□□ -1.19
VRK1-206ENST00000557222 OTUB1Q96FW1 271 aaPredicted RBP7.61□□□□□ -1.19
VRK1-206ENST00000557222 BOD1Q96IK1 185 aa7.61□□□□□ -1.19
VRK1-206ENST00000557222 OR7D2Q96RA2 312 aa7.61□□□□□ -1.19
VRK1-206ENST00000557222 ZNF300Q96RE9 604 aaPredicted RBP7.61□□□□□ -1.19
VRK1-206ENST00000557222 INPP5KQ9BT40 448 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms