RNA–Protein interactions for RNA: ENST00000556607.1

SPTLC2-205, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 3

Gene SPTLC2, Length 460 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-205ENST00000556607 SLC38A1Q9H2H9 487 aa9.35□□□□□ -0.91
SPTLC2-205ENST00000556607 ASB6Q9NWX5 421 aa9.35□□□□□ -0.91
SPTLC2-205ENST00000556607 CISD1Q9NZ45 108 aaKnown RBP9.35□□□□□ -0.91
SPTLC2-205ENST00000556607 P2RX2Q9UBL9 471 aa9.35□□□□□ -0.91
SPTLC2-205ENST00000556607 OSGIN1Q9UJX0 560 aa9.35□□□□□ -0.91
SPTLC2-205ENST00000556607 CFAP73A6NFT4 308 aa9.34□□□□□ -0.91
SPTLC2-205ENST00000556607 ABCD4O14678 606 aa9.34□□□□□ -0.91
SPTLC2-205ENST00000556607 UBDO15205 165 aa9.34□□□□□ -0.91
SPTLC2-205ENST00000556607 RAMP1O60894 148 aa9.34□□□□□ -0.91
SPTLC2-205ENST00000556607 TMCC2O75069 709 aa9.34□□□□□ -0.91
SPTLC2-205ENST00000556607 ADAM11O75078 769 aa9.34□□□□□ -0.91
SPTLC2-205ENST00000556607 SNNO75324 88 aaPredicted RBP9.34□□□□□ -0.91
SPTLC2-205ENST00000556607 GKN3PP0CG01 181 aa9.34□□□□□ -0.91
SPTLC2-205ENST00000556607 ETFAP13804 333 aa9.34□□□□□ -0.91
SPTLC2-205ENST00000556607 NCF2P19878 526 aaPredicted RBP9.34□□□□□ -0.91
SPTLC2-205ENST00000556607 ZNF83P51522 516 aa9.34□□□□□ -0.91
SPTLC2-205ENST00000556607 POLR2JP52435 117 aaKnown RBP9.34□□□□□ -0.91
SPTLC2-205ENST00000556607 CRISP3P54108 245 aa9.34□□□□□ -0.91
SPTLC2-205ENST00000556607 CDH11P55287 796 aa9.34□□□□□ -0.91
SPTLC2-205ENST00000556607 DSTNP60981 165 aa9.34□□□□□ -0.91
SPTLC2-205ENST00000556607 COPZ1P61923 177 aa9.34□□□□□ -0.91
SPTLC2-205ENST00000556607 SLC35A1P78382 337 aa9.34□□□□□ -0.91
SPTLC2-205ENST00000556607 PDK3Q15120 406 aa9.34□□□□□ -0.91
SPTLC2-205ENST00000556607 GSTA3Q16772 222 aa9.34□□□□□ -0.91
SPTLC2-205ENST00000556607 CLEC12BQ2HXU8 276 aa9.34□□□□□ -0.91
SPTLC2-205ENST00000556607 LIN52Q52LA3 116 aa9.34□□□□□ -0.91
SPTLC2-205ENST00000556607 PDCD4Q53EL6 469 aaKnown RBP9.34□□□□□ -0.91
SPTLC2-205ENST00000556607 LSRQ86X29 649 aaPredicted RBP9.34□□□□□ -0.91
SPTLC2-205ENST00000556607 VRK2Q86Y07 508 aa9.34□□□□□ -0.91
SPTLC2-205ENST00000556607 DEPDC4Q8N2C3 294 aa9.34□□□□□ -0.91
SPTLC2-205ENST00000556607 ZNF433Q8N7K0 673 aaPredicted RBP9.34□□□□□ -0.91
SPTLC2-205ENST00000556607 OR52P1PQ8NH57 321 aa9.34□□□□□ -0.91
SPTLC2-205ENST00000556607 ITCHQ96J02 903 aa9.34□□□□□ -0.91
SPTLC2-205ENST00000556607 TAPBPLQ9BX59 468 aa9.34□□□□□ -0.91
SPTLC2-205ENST00000556607 C1QTNF6Q9BXI9 259 aa9.34□□□□□ -0.91
SPTLC2-205ENST00000556607 ARMC7Q9H6L4 198 aa9.34□□□□□ -0.91
SPTLC2-205ENST00000556607 FAIMQ9NVQ4 179 aa9.34□□□□□ -0.91
SPTLC2-205ENST00000556607 RLIMQ9NVW2 624 aa9.34□□□□□ -0.91
SPTLC2-205ENST00000556607 CALML5Q9NZT1 146 aa9.34□□□□□ -0.91
SPTLC2-205ENST00000556607 ZNF232Q9UNY5 417 aa9.34□□□□□ -0.91
SPTLC2-205ENST00000556607 MAGED1Q9Y5V3 778 aaPredicted RBP9.34□□□□□ -0.91
SPTLC2-205ENST00000556607 VPS13CQ709C8 3753 aa9.34□□□□□ -0.91
SPTLC2-205ENST00000556607 C2CD3Q4AC94 2353 aa9.34□□□□□ -0.91
SPTLC2-205ENST00000556607 IGKV3D-15A0A087WSY6 115 aa9.33□□□□□ -0.92
SPTLC2-205ENST00000556607 OR5H1A6NKK0 313 aa9.33□□□□□ -0.92
SPTLC2-205ENST00000556607 ZNF716A6NP11 495 aa9.33□□□□□ -0.92
SPTLC2-205ENST00000556607 M0R1B8 84 aa9.33□□□□□ -0.92
SPTLC2-205ENST00000556607 ZNF208O43345 1280 aa9.33□□□□□ -0.92
SPTLC2-205ENST00000556607 DNPH1O43598 174 aa9.33□□□□□ -0.92
SPTLC2-205ENST00000556607 EIF1BO60739 113 aaKnown RBP9.33□□□□□ -0.92
SPTLC2-205ENST00000556607 KRT33AO76009 404 aa9.33□□□□□ -0.92
SPTLC2-205ENST00000556607 GPIP06744 558 aa9.33□□□□□ -0.92
SPTLC2-205ENST00000556607 SOD3P08294 240 aa9.33□□□□□ -0.92
SPTLC2-205ENST00000556607 IMPDH2P12268 514 aa9.33□□□□□ -0.92
SPTLC2-205ENST00000556607 CDH2P19022 906 aaPredicted RBP9.33□□□□□ -0.92
SPTLC2-205ENST00000556607 PTNP21246 168 aa9.33□□□□□ -0.92
SPTLC2-205ENST00000556607 IDUAP35475 653 aa9.33□□□□□ -0.92
SPTLC2-205ENST00000556607 SLC1A3P43003 542 aa9.33□□□□□ -0.92
SPTLC2-205ENST00000556607 STX1BP61266 288 aa9.33□□□□□ -0.92
SPTLC2-205ENST00000556607 EPS8Q12929 822 aa9.33□□□□□ -0.92
SPTLC2-205ENST00000556607 BNIP2Q12982 314 aa9.33□□□□□ -0.92
SPTLC2-205ENST00000556607 TNK1Q13470 666 aa9.33□□□□□ -0.92
SPTLC2-205ENST00000556607 CEACAM7Q14002 265 aa9.33□□□□□ -0.92
SPTLC2-205ENST00000556607 LARS2Q15031 903 aaKnown RBP9.33□□□□□ -0.92
SPTLC2-205ENST00000556607 OR7A5Q15622 319 aa9.33□□□□□ -0.92
SPTLC2-205ENST00000556607 RPS26P11Q5JNZ5 115 aaPredicted RBP9.33□□□□□ -0.92
SPTLC2-205ENST00000556607 OTUD3Q5T2D3 398 aaPredicted RBP9.33□□□□□ -0.92
SPTLC2-205ENST00000556607 TMEM225Q6GV28 225 aa9.33□□□□□ -0.92
SPTLC2-205ENST00000556607 SLC22A25Q6T423 547 aa9.33□□□□□ -0.92
SPTLC2-205ENST00000556607 KLHL17Q6TDP4 642 aa9.33□□□□□ -0.92
SPTLC2-205ENST00000556607 TMEM108Q6UXF1 575 aa9.33□□□□□ -0.92
SPTLC2-205ENST00000556607 GPAT4Q86UL3 456 aa9.33□□□□□ -0.92
SPTLC2-205ENST00000556607 P2RY8Q86VZ1 359 aa9.33□□□□□ -0.92
SPTLC2-205ENST00000556607 ZNF440Q8IYI8 595 aa9.33□□□□□ -0.92
SPTLC2-205ENST00000556607 MIER2Q8N344 545 aa9.33□□□□□ -0.92
SPTLC2-205ENST00000556607 OR52E4Q8NGH9 312 aa9.33□□□□□ -0.92
SPTLC2-205ENST00000556607 HS6ST2Q96MM7 605 aa9.33□□□□□ -0.92
SPTLC2-205ENST00000556607 TPT1P8Q9HAU6 139 aa9.33□□□□□ -0.92
SPTLC2-205ENST00000556607 TMBIM4Q9HC24 238 aa9.33□□□□□ -0.92
SPTLC2-205ENST00000556607 ZNF701Q9NV72 531 aaPredicted RBP9.33□□□□□ -0.92
SPTLC2-205ENST00000556607 PARPBPQ9NWS1 579 aa9.33□□□□□ -0.92
SPTLC2-205ENST00000556607 ADPRHL2Q9NX46 363 aa9.33□□□□□ -0.92
SPTLC2-205ENST00000556607 TAS2R16Q9NYV7 291 aa9.33□□□□□ -0.92
SPTLC2-205ENST00000556607 TRAPPC4Q9Y296 219 aa9.33□□□□□ -0.92
SPTLC2-205ENST00000556607 ZC3H12DA2A288 527 aaKnown RBP9.32□□□□□ -0.92
SPTLC2-205ENST00000556607 C5orf58C9J3I9 102 aa9.32□□□□□ -0.92
SPTLC2-205ENST00000556607 RNF223E7ERA6 249 aa9.32□□□□□ -0.92
SPTLC2-205ENST00000556607 AKR7A3O95154 331 aa9.32□□□□□ -0.92
SPTLC2-205ENST00000556607 PGM3O95394 542 aa9.32□□□□□ -0.92
SPTLC2-205ENST00000556607 DANCRP0C864 163 aa9.32□□□□□ -0.92
SPTLC2-205ENST00000556607 PAX1P15863 534 aa9.32□□□□□ -0.92
SPTLC2-205ENST00000556607 COX5AP20674 150 aa9.32□□□□□ -0.92
SPTLC2-205ENST00000556607 RPS4Y1P22090 263 aaKnown RBP9.32□□□□□ -0.92
SPTLC2-205ENST00000556607 PLAURQ03405 335 aa9.32□□□□□ -0.92
SPTLC2-205ENST00000556607 GTDC1Q4AE62 458 aa9.32□□□□□ -0.92
SPTLC2-205ENST00000556607 AP1ARQ63HQ0 302 aa9.32□□□□□ -0.92
SPTLC2-205ENST00000556607 OR7E24Q6IFN5 339 aa9.32□□□□□ -0.92
SPTLC2-205ENST00000556607 ZNF836Q6ZNA1 936 aa9.32□□□□□ -0.92
SPTLC2-205ENST00000556607 SSX8Q7RTT4 187 aa9.32□□□□□ -0.92
SPTLC2-205ENST00000556607 AAED1Q7RTV5 226 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms