RNA–Protein interactions for RNA: ENST00000556486.5

SCFD1-220, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 974 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-220ENST00000556486 PRKAG1P54619 331 aa8.84□□□□□ -0.99
SCFD1-220ENST00000556486 RPL38P63173 70 aaKnown RBP8.84□□□□□ -0.99
SCFD1-220ENST00000556486 IRX1P78414 480 aaPredicted RBP8.84□□□□□ -0.99
SCFD1-220ENST00000556486 POU6F2P78424 691 aaPredicted RBP8.84□□□□□ -0.99
SCFD1-220ENST00000556486 ZNF117Q03924 483 aa8.84□□□□□ -0.99
SCFD1-220ENST00000556486 FOXF1Q12946 379 aa8.84□□□□□ -0.99
SCFD1-220ENST00000556486 UGT3A2Q3SY77 523 aa8.84□□□□□ -0.99
SCFD1-220ENST00000556486 FAM120AOSQ5T036 256 aa8.84□□□□□ -0.99
SCFD1-220ENST00000556486 NCMAPQ5T1S8 102 aa8.84□□□□□ -0.99
SCFD1-220ENST00000556486 MBNL2Q5VZF2 373 aaKnown RBP8.84□□□□□ -0.99
SCFD1-220ENST00000556486 STEAP3Q658P3 488 aa8.84□□□□□ -0.99
SCFD1-220ENST00000556486 CYB5R2Q6BCY4 276 aa8.84□□□□□ -0.99
SCFD1-220ENST00000556486 CDC73Q6P1J9 531 aa8.84□□□□□ -0.99
SCFD1-220ENST00000556486 GATSQ8NAP1 163 aa8.84□□□□□ -0.99
SCFD1-220ENST00000556486 ZNF527Q8NB42 609 aa8.84□□□□□ -0.99
SCFD1-220ENST00000556486 ABHD3Q8WU67 409 aa8.84□□□□□ -0.99
SCFD1-220ENST00000556486 HSD17B8Q92506 261 aa8.84□□□□□ -0.99
SCFD1-220ENST00000556486 C3orf49Q96BT1 292 aa8.84□□□□□ -0.99
SCFD1-220ENST00000556486 C16orf58Q96GQ5 468 aa8.84□□□□□ -0.99
SCFD1-220ENST00000556486 SH3YL1Q96HL8 342 aaPredicted RBP8.84□□□□□ -0.99
SCFD1-220ENST00000556486 MRGPRX4Q96LA9 322 aa8.84□□□□□ -0.99
SCFD1-220ENST00000556486 TSSK3Q96PN8 268 aa8.84□□□□□ -0.99
SCFD1-220ENST00000556486 POTEKPQ9BYX7 375 aa8.84□□□□□ -0.99
SCFD1-220ENST00000556486 C12orf65Q9H3J6 166 aaKnown RBP8.84□□□□□ -0.99
SCFD1-220ENST00000556486 POFUT1Q9H488 388 aa8.84□□□□□ -0.99
SCFD1-220ENST00000556486 ESRP2Q9H6T0 727 aaKnown RBP8.84□□□□□ -0.99
SCFD1-220ENST00000556486 TMEM185BQ9H7F4 350 aa8.84□□□□□ -0.99
SCFD1-220ENST00000556486 COQ10BQ9H8M1 238 aa8.84□□□□□ -0.99
SCFD1-220ENST00000556486 ZCCHC3Q9NUD5 404 aaKnown RBP8.84□□□□□ -0.99
SCFD1-220ENST00000556486 SH3BP4Q9P0V3 963 aa8.84□□□□□ -0.99
SCFD1-220ENST00000556486 PLCE1Q9P212 2302 aa8.84□□□□□ -0.99
SCFD1-220ENST00000556486 ING1Q9UK53 422 aaPredicted RBP8.84□□□□□ -0.99
SCFD1-220ENST00000556486 TMEM114B3SHH9 223 aa8.83□□□□□ -1
SCFD1-220ENST00000556486 SCAMP2O15127 329 aaKnown RBP8.83□□□□□ -1
SCFD1-220ENST00000556486 LMX1BO60663 402 aa8.83□□□□□ -1
SCFD1-220ENST00000556486 TRIM13O60858 407 aa8.83□□□□□ -1
SCFD1-220ENST00000556486 LYPLA1O75608 230 aaPredicted RBP8.83□□□□□ -1
SCFD1-220ENST00000556486 LY6HO94772 140 aa8.83□□□□□ -1
SCFD1-220ENST00000556486 CHEK2O96017 543 aa8.83□□□□□ -1
SCFD1-220ENST00000556486 YES1P07947 543 aa8.83□□□□□ -1
SCFD1-220ENST00000556486 KRT16P08779 473 aa8.83□□□□□ -1
SCFD1-220ENST00000556486 PRKCAP17252 672 aa8.83□□□□□ -1
SCFD1-220ENST00000556486 KRT4P19013 534 aa8.83□□□□□ -1
SCFD1-220ENST00000556486 SLC16A1P53985 500 aa8.83□□□□□ -1
SCFD1-220ENST00000556486 RAC3P60763 192 aa8.83□□□□□ -1
SCFD1-220ENST00000556486 VLDLRP98155 873 aa8.83□□□□□ -1
SCFD1-220ENST00000556486 ITGADQ13349 1161 aa8.83□□□□□ -1
SCFD1-220ENST00000556486 DOC2BQ14184 412 aa8.83□□□□□ -1
SCFD1-220ENST00000556486 LASP1Q14847 261 aaKnown RBP8.83□□□□□ -1
SCFD1-220ENST00000556486 PCLAFQ15004 111 aa8.83□□□□□ -1
SCFD1-220ENST00000556486 TAB1Q15750 504 aa8.83□□□□□ -1
SCFD1-220ENST00000556486 XKR7Q5GH72 579 aa8.83□□□□□ -1
SCFD1-220ENST00000556486 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.83□□□□□ -1
SCFD1-220ENST00000556486 AP1ARQ63HQ0 302 aa8.83□□□□□ -1
SCFD1-220ENST00000556486 CLEC2AQ6UVW9 174 aa8.83□□□□□ -1
SCFD1-220ENST00000556486 CBLN3Q6UW01 205 aa8.83□□□□□ -1
SCFD1-220ENST00000556486 Q6ZT83 130 aa8.83□□□□□ -1
SCFD1-220ENST00000556486 FCRLAQ7L513 359 aa8.83□□□□□ -1
SCFD1-220ENST00000556486 C10orf107Q8IVU9 208 aa8.83□□□□□ -1
SCFD1-220ENST00000556486 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.83□□□□□ -1
SCFD1-220ENST00000556486 TOR1AIP2Q8NFQ8 470 aa8.83□□□□□ -1
SCFD1-220ENST00000556486 OR56A1Q8NGH5 318 aa8.83□□□□□ -1
SCFD1-220ENST00000556486 FBXO30Q8TB52 745 aa8.83□□□□□ -1
SCFD1-220ENST00000556486 ZFP90Q8TF47 636 aa8.83□□□□□ -1
SCFD1-220ENST00000556486 OIT3Q8WWZ8 545 aa8.83□□□□□ -1
SCFD1-220ENST00000556486 OR5P2Q8WZ92 322 aa8.83□□□□□ -1
SCFD1-220ENST00000556486 COQ8BQ96D53 544 aa8.83□□□□□ -1
SCFD1-220ENST00000556486 REXO5Q96IC2 774 aaKnown RBP8.83□□□□□ -1
SCFD1-220ENST00000556486 MAP6Q96JE9 813 aa8.83□□□□□ -1
SCFD1-220ENST00000556486 SSBP4Q9BWG4 385 aaPredicted RBP8.83□□□□□ -1
SCFD1-220ENST00000556486 GATA5Q9BWX5 397 aaPredicted RBP8.83□□□□□ -1
SCFD1-220ENST00000556486 CACNG6Q9BXT2 260 aa8.83□□□□□ -1
SCFD1-220ENST00000556486 ACTRT3Q9BYD9 372 aa8.83□□□□□ -1
SCFD1-220ENST00000556486 SRXN1Q9BYN0 137 aa8.83□□□□□ -1
SCFD1-220ENST00000556486 TRIM2Q9C040 744 aa8.83□□□□□ -1
SCFD1-220ENST00000556486 L2HGDHQ9H9P8 463 aa8.83□□□□□ -1
SCFD1-220ENST00000556486 LPAR3Q9UBY5 353 aa8.83□□□□□ -1
SCFD1-220ENST00000556486 BAIAP2L1Q9UHR4 511 aa8.83□□□□□ -1
SCFD1-220ENST00000556486 DPRXA6NFQ7 191 aa8.82□□□□□ -1
SCFD1-220ENST00000556486 ZNF814B7Z6K7 855 aa8.82□□□□□ -1
SCFD1-220ENST00000556486 H3BNH8 94 aa8.82□□□□□ -1
SCFD1-220ENST00000556486 COPEO14579 308 aa8.82□□□□□ -1
SCFD1-220ENST00000556486 ZNF195O14628 629 aa8.82□□□□□ -1
SCFD1-220ENST00000556486 KIAA0513O60268 411 aa8.82□□□□□ -1
SCFD1-220ENST00000556486 EIF4E2O60573 245 aaKnown RBP8.82□□□□□ -1
SCFD1-220ENST00000556486 SHBGP04278 402 aa8.82□□□□□ -1
SCFD1-220ENST00000556486 GUSBP08236 651 aa8.82□□□□□ -1
SCFD1-220ENST00000556486 LINC00032P0C843 101 aa8.82□□□□□ -1
SCFD1-220ENST00000556486 ITGA2P17301 1181 aa8.82□□□□□ -1
SCFD1-220ENST00000556486 COX5AP20674 150 aa8.82□□□□□ -1
SCFD1-220ENST00000556486 ATP6V1C1P21283 382 aa8.82□□□□□ -1
SCFD1-220ENST00000556486 IL32P24001 234 aa8.82□□□□□ -1
SCFD1-220ENST00000556486 SFTPDP35247 375 aa8.82□□□□□ -1
SCFD1-220ENST00000556486 HPCAL1P37235 193 aa8.82□□□□□ -1
SCFD1-220ENST00000556486 OR3A2P47893 321 aa8.82□□□□□ -1
SCFD1-220ENST00000556486 ATP12AP54707 1039 aa8.82□□□□□ -1
SCFD1-220ENST00000556486 CDH11P55287 796 aa8.82□□□□□ -1
SCFD1-220ENST00000556486 SELENBP1Q13228 472 aa8.82□□□□□ -1
SCFD1-220ENST00000556486 STK11Q15831 433 aa8.82□□□□□ -1
SCFD1-220ENST00000556486 DCST2Q5T1A1 773 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms