RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 SIRPDQ9H106 197 aa4.69□□□□□ -1.66
SRP54-211ENST00000556445 CLMPQ9H6B4 373 aa4.69□□□□□ -1.66
SRP54-211ENST00000556445 MVB12BQ9H7P6 319 aa4.69□□□□□ -1.66
SRP54-211ENST00000556445 NT5DC2Q9H857 520 aa4.69□□□□□ -1.66
SRP54-211ENST00000556445 FN3KRPQ9HA64 309 aa4.69□□□□□ -1.66
SRP54-211ENST00000556445 PELI2Q9HAT8 420 aa4.69□□□□□ -1.66
SRP54-211ENST00000556445 Q9N2J8 555 aa4.69□□□□□ -1.66
SRP54-211ENST00000556445 SLC52A3Q9NQ40 469 aa4.69□□□□□ -1.66
SRP54-211ENST00000556445 ARMC1Q9NVT9 282 aa4.69□□□□□ -1.66
SRP54-211ENST00000556445 FAM120CQ9NX05 1096 aaKnown RBP4.69□□□□□ -1.66
SRP54-211ENST00000556445 FBXL12Q9NXK8 326 aa4.69□□□□□ -1.66
SRP54-211ENST00000556445 ELOVL5Q9NYP7 299 aa4.69□□□□□ -1.66
SRP54-211ENST00000556445 AHSPQ9NZD4 102 aa4.69□□□□□ -1.66
SRP54-211ENST00000556445 KLHL9Q9P2J3 617 aa4.69□□□□□ -1.66
SRP54-211ENST00000556445 ICKQ9UPZ9 632 aa4.69□□□□□ -1.66
SRP54-211ENST00000556445 ASF1AQ9Y294 204 aa4.69□□□□□ -1.66
SRP54-211ENST00000556445 CARD8Q9Y2G2 431 aa4.69□□□□□ -1.66
SRP54-211ENST00000556445 LSM4Q9Y4Z0 139 aaKnown RBP4.69□□□□□ -1.66
SRP54-211ENST00000556445 PTGDR2Q9Y5Y4 395 aa4.69□□□□□ -1.66
SRP54-211ENST00000556445 CEPT1Q9Y6K0 416 aa4.69□□□□□ -1.66
SRP54-211ENST00000556445 LOC100506127A0A0U1RQW1 187 aa4.68□□□□□ -1.66
SRP54-211ENST00000556445 A0A1W2PPC1 479 aa4.68□□□□□ -1.66
SRP54-211ENST00000556445 FEZF1A0PJY2 475 aa4.68□□□□□ -1.66
SRP54-211ENST00000556445 FAM149AA5PLN7 773 aa4.68□□□□□ -1.66
SRP54-211ENST00000556445 PRORSD1PA6NEY8 169 aa4.68□□□□□ -1.66
SRP54-211ENST00000556445 ANKRD61A6NGH8 418 aa4.68□□□□□ -1.66
SRP54-211ENST00000556445 DUXAA6NLW8 204 aa4.68□□□□□ -1.66
SRP54-211ENST00000556445 C4orf47A7E2U8 309 aa4.68□□□□□ -1.66
SRP54-211ENST00000556445 EVPLLA8MZ36 301 aa4.68□□□□□ -1.66
SRP54-211ENST00000556445 MCIDASD6RGH6 385 aa4.68□□□□□ -1.66
SRP54-211ENST00000556445 K7EQS6 105 aa4.68□□□□□ -1.66
SRP54-211ENST00000556445 FXYD1O00168 92 aa4.68□□□□□ -1.66
SRP54-211ENST00000556445 CLIC1O00299 241 aa4.68□□□□□ -1.66
SRP54-211ENST00000556445 NME4O00746 187 aa4.68□□□□□ -1.66
SRP54-211ENST00000556445 NDUFS4O43181 175 aa4.68□□□□□ -1.66
SRP54-211ENST00000556445 DNAJB6O75190 326 aa4.68□□□□□ -1.66
SRP54-211ENST00000556445 SCELO95171 688 aa4.68□□□□□ -1.66
SRP54-211ENST00000556445 KLF8O95600 359 aaPredicted RBP4.68□□□□□ -1.66
SRP54-211ENST00000556445 RAB40ALP0C0E4 278 aa4.68□□□□□ -1.66
SRP54-211ENST00000556445 ERGP11308 486 aa4.68□□□□□ -1.66
SRP54-211ENST00000556445 FCGR2AP12318 317 aa4.68□□□□□ -1.66
SRP54-211ENST00000556445 BCKDHAP12694 445 aa4.68□□□□□ -1.66
SRP54-211ENST00000556445 HOXB2P14652 356 aa4.68□□□□□ -1.66
SRP54-211ENST00000556445 TCN1P20061 433 aaPredicted RBP4.68□□□□□ -1.66
SRP54-211ENST00000556445 IDSP22304 550 aa4.68□□□□□ -1.66
SRP54-211ENST00000556445 HRH2P25021 359 aa4.68□□□□□ -1.66
SRP54-211ENST00000556445 DUSP1P28562 367 aa4.68□□□□□ -1.66
SRP54-211ENST00000556445 IL12AP29459 219 aa4.68□□□□□ -1.66
SRP54-211ENST00000556445 PDHA2P29803 388 aa4.68□□□□□ -1.66
SRP54-211ENST00000556445 HPCAL1P37235 193 aa4.68□□□□□ -1.66
SRP54-211ENST00000556445 SLC1A3P43003 542 aa4.68□□□□□ -1.66
SRP54-211ENST00000556445 BDKRB1P46663 353 aa4.68□□□□□ -1.66
SRP54-211ENST00000556445 IER3P46695 156 aa4.68□□□□□ -1.66
SRP54-211ENST00000556445 RAE1P78406 368 aaKnown RBP4.68□□□□□ -1.66
SRP54-211ENST00000556445 MS4A2Q01362 244 aa4.68□□□□□ -1.66
SRP54-211ENST00000556445 HMGCS1Q01581 520 aa4.68□□□□□ -1.66
SRP54-211ENST00000556445 KLC1Q07866 573 aa4.68□□□□□ -1.66
SRP54-211ENST00000556445 MED21Q13503 144 aa4.68□□□□□ -1.66
SRP54-211ENST00000556445 MFSD13AQ14CX5 517 aa4.68□□□□□ -1.66
SRP54-211ENST00000556445 KIAA0040Q15053 153 aa4.68□□□□□ -1.66
SRP54-211ENST00000556445 TRIP10Q15642 601 aa4.68□□□□□ -1.66
SRP54-211ENST00000556445 ANKRD55Q3KP44 614 aa4.68□□□□□ -1.66
SRP54-211ENST00000556445 Q3ZCU0 254 aa4.68□□□□□ -1.66
SRP54-211ENST00000556445 NKAIN1Q4KMZ8 207 aa4.68□□□□□ -1.66
SRP54-211ENST00000556445 SGO1Q5FBB7 561 aa4.68□□□□□ -1.66
SRP54-211ENST00000556445 Q5PR19 223 aa4.68□□□□□ -1.66
SRP54-211ENST00000556445 PHYHD1Q5SRE7 291 aa4.68□□□□□ -1.66
SRP54-211ENST00000556445 C6orf10Q5SRN2 563 aa4.68□□□□□ -1.66
SRP54-211ENST00000556445 OGFRL1Q5TC84 451 aaPredicted RBP4.68□□□□□ -1.66
SRP54-211ENST00000556445 HIST2H2BCQ6DN03 193 aa4.68□□□□□ -1.66
SRP54-211ENST00000556445 HIST2H2BDQ6DRA6 164 aa4.68□□□□□ -1.66
SRP54-211ENST00000556445 NANOGP8Q6NSW7 305 aa4.68□□□□□ -1.66
SRP54-211ENST00000556445 NOXRED1Q6NXP6 359 aa4.68□□□□□ -1.66
SRP54-211ENST00000556445 ERICH5Q6P6B1 374 aa4.68□□□□□ -1.66
SRP54-211ENST00000556445 IZUMO2Q6UXV1 221 aa4.68□□□□□ -1.66
SRP54-211ENST00000556445 TMEM26Q6ZUK4 368 aa4.68□□□□□ -1.66
SRP54-211ENST00000556445 PAGE2Q7Z2X7 111 aa4.68□□□□□ -1.66
SRP54-211ENST00000556445 HAPLN4Q86UW8 402 aa4.68□□□□□ -1.66
SRP54-211ENST00000556445 TRIM69Q86WT6 500 aa4.68□□□□□ -1.66
SRP54-211ENST00000556445 MISPQ8IVT2 679 aa4.68□□□□□ -1.66
SRP54-211ENST00000556445 PACRGLQ8N7B6 248 aa4.68□□□□□ -1.66
SRP54-211ENST00000556445 C17orf47Q8NEP4 570 aa4.68□□□□□ -1.66
SRP54-211ENST00000556445 BBS1Q8NFJ9 593 aa4.68□□□□□ -1.66
SRP54-211ENST00000556445 TTLQ8NG68 377 aa4.68□□□□□ -1.66
SRP54-211ENST00000556445 OR52E4Q8NGH9 312 aa4.68□□□□□ -1.66
SRP54-211ENST00000556445 OR5K2Q8NHB8 316 aa4.68□□□□□ -1.66
SRP54-211ENST00000556445 WDR20Q8TBZ3 569 aa4.68□□□□□ -1.66
SRP54-211ENST00000556445 PYCR2Q96C36 320 aa4.68□□□□□ -1.66
SRP54-211ENST00000556445 MTERF3Q96E29 417 aa4.68□□□□□ -1.66
SRP54-211ENST00000556445 MAGED4Q96JG8 741 aa4.68□□□□□ -1.66
SRP54-211ENST00000556445 SLC45A3Q96JT2 553 aa4.68□□□□□ -1.66
SRP54-211ENST00000556445 FCRL1Q96LA6 429 aa4.68□□□□□ -1.66
SRP54-211ENST00000556445 OR52E6Q96RD3 313 aa4.68□□□□□ -1.66
SRP54-211ENST00000556445 AIF1LQ9BQI0 150 aa4.68□□□□□ -1.66
SRP54-211ENST00000556445 ZNF559Q9BR84 538 aa4.68□□□□□ -1.66
SRP54-211ENST00000556445 ATG101Q9BSB4 218 aa4.68□□□□□ -1.66
SRP54-211ENST00000556445 UGT2B28Q9BY64 529 aa4.68□□□□□ -1.66
SRP54-211ENST00000556445 SLC17A9Q9BYT1 436 aa4.68□□□□□ -1.66
SRP54-211ENST00000556445 NMNAT2Q9BZQ4 307 aa4.68□□□□□ -1.66
SRP54-211ENST00000556445 OR52A5Q9H2C5 316 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms