RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 MAGEA8P43361 318 aa19.93■□□□□ 0.78
ACTN1-220ENST00000556433 WDR4P57081 412 aaKnown RBP19.93■□□□□ 0.78
ACTN1-220ENST00000556433 LRRC74AQ0VAA2 488 aa19.93■□□□□ 0.78
ACTN1-220ENST00000556433 GNA13Q14344 377 aa19.93■□□□□ 0.78
ACTN1-220ENST00000556433 ETFDHQ16134 617 aa19.93■□□□□ 0.78
ACTN1-220ENST00000556433 COX20Q5RI15 118 aa19.93■□□□□ 0.78
ACTN1-220ENST00000556433 PNPT1Q8TCS8 783 aaKnown RBP19.93■□□□□ 0.78
ACTN1-220ENST00000556433 THAP1Q9NVV9 213 aa19.93■□□□□ 0.78
ACTN1-220ENST00000556433 NPAP1Q9NZP6 1156 aa19.93■□□□□ 0.78
ACTN1-220ENST00000556433 OSGIN1Q9UJX0 560 aa19.93■□□□□ 0.78
ACTN1-220ENST00000556433 TRPC5OSA6NMA1 111 aa19.92■□□□□ 0.78
ACTN1-220ENST00000556433 SHISA9B4DS77 424 aa19.92■□□□□ 0.78
ACTN1-220ENST00000556433 ABCD4O14678 606 aa19.92■□□□□ 0.78
ACTN1-220ENST00000556433 HDAC3O15379 428 aa19.92■□□□□ 0.78
ACTN1-220ENST00000556433 KRT75O95678 551 aa19.92■□□□□ 0.78
ACTN1-220ENST00000556433 KITP10721 976 aa19.92■□□□□ 0.78
ACTN1-220ENST00000556433 IL7RP16871 459 aa19.92■□□□□ 0.78
ACTN1-220ENST00000556433 TACR3P29371 465 aa19.92■□□□□ 0.78
ACTN1-220ENST00000556433 POLR2HP52434 150 aaKnown RBP19.92■□□□□ 0.78
ACTN1-220ENST00000556433 SLC16A1P53985 500 aa19.92■□□□□ 0.78
ACTN1-220ENST00000556433 SLC35A1P78382 337 aa19.92■□□□□ 0.78
ACTN1-220ENST00000556433 NXNQ6DKJ4 435 aa19.92■□□□□ 0.78
ACTN1-220ENST00000556433 MGARPQ8TDB4 240 aa19.92■□□□□ 0.78
ACTN1-220ENST00000556433 WDR60Q8WVS4 1066 aa19.92■□□□□ 0.78
ACTN1-220ENST00000556433 PMM1Q92871 262 aa19.92■□□□□ 0.78
ACTN1-220ENST00000556433 DDIT4LQ96D03 193 aa19.92■□□□□ 0.78
ACTN1-220ENST00000556433 NAA11Q9BSU3 229 aaPredicted RBP19.92■□□□□ 0.78
ACTN1-220ENST00000556433 ALG2Q9H553 416 aa19.92■□□□□ 0.78
ACTN1-220ENST00000556433 ASB6Q9NWX5 421 aa19.92■□□□□ 0.78
ACTN1-220ENST00000556433 TMEM72A0PK05 275 aa19.91■□□□□ 0.78
ACTN1-220ENST00000556433 CFAP73A6NFT4 308 aa19.91■□□□□ 0.78
ACTN1-220ENST00000556433 RNF223E7ERA6 249 aa19.91■□□□□ 0.78
ACTN1-220ENST00000556433 ZNF208O43345 1280 aa19.91■□□□□ 0.78
ACTN1-220ENST00000556433 CD8AP01732 235 aa19.91■□□□□ 0.78
ACTN1-220ENST00000556433 DBIP07108 87 aaKnown RBP19.91■□□□□ 0.78
ACTN1-220ENST00000556433 LSRQ86X29 649 aaPredicted RBP19.91■□□□□ 0.78
ACTN1-220ENST00000556433 PRIMA1Q86XR5 153 aa19.91■□□□□ 0.78
ACTN1-220ENST00000556433 GLB1L3Q8NCI6 653 aaPredicted RBP19.91■□□□□ 0.78
ACTN1-220ENST00000556433 OR52N5Q8NH56 324 aa19.91■□□□□ 0.78
ACTN1-220ENST00000556433 RADILQ96JH8 1075 aa19.91■□□□□ 0.78
ACTN1-220ENST00000556433 TRAF4Q9BUZ4 470 aaPredicted RBP19.91■□□□□ 0.78
ACTN1-220ENST00000556433 TMEM120BA0PK00 339 aa19.9■□□□□ 0.78
ACTN1-220ENST00000556433 RFXANKO14593 260 aa19.9■□□□□ 0.78
ACTN1-220ENST00000556433 EIF1BO60739 113 aaKnown RBP19.9■□□□□ 0.78
ACTN1-220ENST00000556433 SNNO75324 88 aaPredicted RBP19.9■□□□□ 0.78
ACTN1-220ENST00000556433 IMPDH2P12268 514 aa19.9■□□□□ 0.78
ACTN1-220ENST00000556433 UQCRBP14927 111 aa19.9■□□□□ 0.78
ACTN1-220ENST00000556433 RPS4Y1P22090 263 aaKnown RBP19.9■□□□□ 0.78
ACTN1-220ENST00000556433 ACVR1BP36896 505 aa19.9■□□□□ 0.78
ACTN1-220ENST00000556433 SLC1A3P43003 542 aa19.9■□□□□ 0.78
ACTN1-220ENST00000556433 CDH11P55287 796 aa19.9■□□□□ 0.78
ACTN1-220ENST00000556433 H3F3AP84243 136 aa19.9■□□□□ 0.78
ACTN1-220ENST00000556433 MRPL2Q5T653 305 aaKnown RBP19.9■□□□□ 0.78
ACTN1-220ENST00000556433 TMEM108Q6UXF1 575 aa19.9■□□□□ 0.78
ACTN1-220ENST00000556433 PEX5LQ8IYB4 626 aa19.9■□□□□ 0.78
ACTN1-220ENST00000556433 PIAS4Q8N2W9 510 aaPredicted RBP19.9■□□□□ 0.78
ACTN1-220ENST00000556433 MAPK1IP1LQ8NDC0 245 aa19.9■□□□□ 0.78
ACTN1-220ENST00000556433 SLCO5A1Q9H2Y9 848 aa19.9■□□□□ 0.78
ACTN1-220ENST00000556433 FAIMQ9NVQ4 179 aa19.9■□□□□ 0.78
ACTN1-220ENST00000556433 TAS2R16Q9NYV7 291 aa19.9■□□□□ 0.78
ACTN1-220ENST00000556433 A0A1W2PR80 420 aa19.89■□□□□ 0.77
ACTN1-220ENST00000556433 SLCO1B7G3V0H7 640 aa19.89■□□□□ 0.77
ACTN1-220ENST00000556433 FAAHO00519 579 aa19.89■□□□□ 0.77
ACTN1-220ENST00000556433 SLC22A3O75751 556 aa19.89■□□□□ 0.77
ACTN1-220ENST00000556433 IGHV4-39P01824 125 aa19.89■□□□□ 0.77
ACTN1-220ENST00000556433 IL6P05231 212 aa19.89■□□□□ 0.77
ACTN1-220ENST00000556433 PTNP21246 168 aa19.89■□□□□ 0.77
ACTN1-220ENST00000556433 ZNF83P51522 516 aa19.89■□□□□ 0.77
ACTN1-220ENST00000556433 MAP2K6P52564 334 aa19.89■□□□□ 0.77
ACTN1-220ENST00000556433 FOXG1P55316 489 aaPredicted RBP19.89■□□□□ 0.77
ACTN1-220ENST00000556433 EPS8Q12929 822 aa19.89■□□□□ 0.77
ACTN1-220ENST00000556433 ATG16L1Q676U5 607 aa19.89■□□□□ 0.77
ACTN1-220ENST00000556433 KLHL17Q6TDP4 642 aa19.89■□□□□ 0.77
ACTN1-220ENST00000556433 CASP12Q6UXS9 341 aa19.89■□□□□ 0.77
ACTN1-220ENST00000556433 OR52E4Q8NGH9 312 aa19.89■□□□□ 0.77
ACTN1-220ENST00000556433 MUS81Q96NY9 551 aa19.89■□□□□ 0.77
ACTN1-220ENST00000556433 REG4Q9BYZ8 158 aa19.89■□□□□ 0.77
ACTN1-220ENST00000556433 RLIMQ9NVW2 624 aa19.89■□□□□ 0.77
ACTN1-220ENST00000556433 PARPBPQ9NWS1 579 aa19.89■□□□□ 0.77
ACTN1-220ENST00000556433 MALT1Q9UDY8 824 aa19.89■□□□□ 0.77
ACTN1-220ENST00000556433 ZANQ9Y493 2812 aa19.89■□□□□ 0.77
ACTN1-220ENST00000556433 SLC25A15Q9Y619 301 aa19.89■□□□□ 0.77
ACTN1-220ENST00000556433 ZC3H12DA2A288 527 aaKnown RBP19.88■□□□□ 0.77
ACTN1-220ENST00000556433 ZNF500O60304 480 aaPredicted RBP19.88■□□□□ 0.77
ACTN1-220ENST00000556433 NDUFS7O75251 213 aa19.88■□□□□ 0.77
ACTN1-220ENST00000556433 IDO1P14902 403 aa19.88■□□□□ 0.77
ACTN1-220ENST00000556433 MAPK11Q15759 364 aa19.88■□□□□ 0.77
ACTN1-220ENST00000556433 GABRA6Q16445 453 aa19.88■□□□□ 0.77
ACTN1-220ENST00000556433 GSTA3Q16772 222 aa19.88■□□□□ 0.77
ACTN1-220ENST00000556433 PDCD4Q53EL6 469 aaKnown RBP19.88■□□□□ 0.77
ACTN1-220ENST00000556433 OR7E24Q6IFN5 339 aa19.88■□□□□ 0.77
ACTN1-220ENST00000556433 DTX2Q86UW9 622 aa19.88■□□□□ 0.77
ACTN1-220ENST00000556433 ZNF440Q8IYI8 595 aa19.88■□□□□ 0.77
ACTN1-220ENST00000556433 HS6ST2Q96MM7 605 aa19.88■□□□□ 0.77
ACTN1-220ENST00000556433 GRIP2Q9C0E4 1043 aa19.88■□□□□ 0.77
ACTN1-220ENST00000556433 ADAM19Q9H013 955 aa19.88■□□□□ 0.77
ACTN1-220ENST00000556433 SLC6A13Q9NSD5 602 aa19.88■□□□□ 0.77
ACTN1-220ENST00000556433 UPB1Q9UBR1 384 aa19.88■□□□□ 0.77
ACTN1-220ENST00000556433 GDF2Q9UK05 429 aaPredicted RBP19.88■□□□□ 0.77
ACTN1-220ENST00000556433 MGAT4BQ9UQ53 548 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms