RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 CDC42EP4Q9H3Q1 356 aaKnown RBP12.09□□□□□ -0.47
ACTN1-219ENST00000556432 OBP2BQ9NPH6 170 aa12.09□□□□□ -0.47
ACTN1-219ENST00000556432 FLVCR1Q9Y5Y0 555 aa12.09□□□□□ -0.47
ACTN1-219ENST00000556432 NPIPB8E9PQR5 432 aa12.08□□□□□ -0.48
ACTN1-219ENST00000556432 SLC28A1O00337 649 aa12.08□□□□□ -0.48
ACTN1-219ENST00000556432 NPR2P20594 1047 aa12.08□□□□□ -0.48
ACTN1-219ENST00000556432 TUBA1BP68363 451 aa12.08□□□□□ -0.48
ACTN1-219ENST00000556432 TUBA4AP68366 448 aa12.08□□□□□ -0.48
ACTN1-219ENST00000556432 NAAAQ02083 359 aa12.08□□□□□ -0.48
ACTN1-219ENST00000556432 RIN1Q13671 783 aa12.08□□□□□ -0.48
ACTN1-219ENST00000556432 KIAA0040Q15053 153 aa12.08□□□□□ -0.48
ACTN1-219ENST00000556432 TBRG1Q3YBR2 411 aa12.08□□□□□ -0.48
ACTN1-219ENST00000556432 MIDNQ504T8 468 aa12.08□□□□□ -0.48
ACTN1-219ENST00000556432 CLEC6AQ6EIG7 209 aa12.08□□□□□ -0.48
ACTN1-219ENST00000556432 FAHD2BQ6P2I3 314 aaPredicted RBP12.08□□□□□ -0.48
ACTN1-219ENST00000556432 TUBA1AQ71U36 451 aa12.08□□□□□ -0.48
ACTN1-219ENST00000556432 EIF3MQ7L2H7 374 aaKnown RBP12.08□□□□□ -0.48
ACTN1-219ENST00000556432 ABHD12BQ7Z5M8 362 aaPredicted RBP12.08□□□□□ -0.48
ACTN1-219ENST00000556432 OR4F15Q8NGB8 312 aa12.08□□□□□ -0.48
ACTN1-219ENST00000556432 OR5D16Q8NGK9 328 aa12.08□□□□□ -0.48
ACTN1-219ENST00000556432 FAHD2AQ96GK7 314 aa12.08□□□□□ -0.48
ACTN1-219ENST00000556432 LRRC37BQ96QE4 947 aa12.08□□□□□ -0.48
ACTN1-219ENST00000556432 OR7D2Q96RA2 312 aa12.08□□□□□ -0.48
ACTN1-219ENST00000556432 NAA11Q9BSU3 229 aaPredicted RBP12.08□□□□□ -0.48
ACTN1-219ENST00000556432 CCDC106Q9BWC9 280 aa12.08□□□□□ -0.48
ACTN1-219ENST00000556432 NMUR2Q9GZQ4 415 aa12.08□□□□□ -0.48
ACTN1-219ENST00000556432 TPK1Q9H3S4 243 aa12.08□□□□□ -0.48
ACTN1-219ENST00000556432 ZDHHC18Q9NUE0 388 aa12.08□□□□□ -0.48
ACTN1-219ENST00000556432 TMEM45AQ9NWC5 275 aa12.08□□□□□ -0.48
ACTN1-219ENST00000556432 TMEM181Q9P2C4 612 aa12.08□□□□□ -0.48
ACTN1-219ENST00000556432 PYCARDQ9ULZ3 195 aa12.08□□□□□ -0.48
ACTN1-219ENST00000556432 FIS1Q9Y3D6 152 aa12.08□□□□□ -0.48
ACTN1-219ENST00000556432 SPEF1Q9Y4P9 236 aa12.08□□□□□ -0.48
ACTN1-219ENST00000556432 EIF1BO60739 113 aaKnown RBP12.07□□□□□ -0.48
ACTN1-219ENST00000556432 MSMBP08118 114 aa12.07□□□□□ -0.48
ACTN1-219ENST00000556432 ADRA2AP08913 450 aa12.07□□□□□ -0.48
ACTN1-219ENST00000556432 CECR9P0C854 216 aa12.07□□□□□ -0.48
ACTN1-219ENST00000556432 UROSP10746 265 aa12.07□□□□□ -0.48
ACTN1-219ENST00000556432 MYL2P10916 166 aa12.07□□□□□ -0.48
ACTN1-219ENST00000556432 SOAT1P35610 550 aa12.07□□□□□ -0.48
ACTN1-219ENST00000556432 ASMTP46597 345 aa12.07□□□□□ -0.48
ACTN1-219ENST00000556432 RPS26P62854 115 aaKnown RBP12.07□□□□□ -0.48
ACTN1-219ENST00000556432 SLC35A1P78382 337 aa12.07□□□□□ -0.48
ACTN1-219ENST00000556432 GALNTL6Q49A17 601 aa12.07□□□□□ -0.48
ACTN1-219ENST00000556432 ANKRD16Q6P6B7 361 aa12.07□□□□□ -0.48
ACTN1-219ENST00000556432 SHISA2Q6UWI4 295 aa12.07□□□□□ -0.48
ACTN1-219ENST00000556432 FRMD7Q6ZUT3 714 aa12.07□□□□□ -0.48
ACTN1-219ENST00000556432 USP43Q70EL4 1123 aa12.07□□□□□ -0.48
ACTN1-219ENST00000556432 AAED1Q7RTV5 226 aa12.07□□□□□ -0.48
ACTN1-219ENST00000556432 LCA5Q86VQ0 697 aa12.07□□□□□ -0.48
ACTN1-219ENST00000556432 POMGNT2Q8NAT1 580 aa12.07□□□□□ -0.48
ACTN1-219ENST00000556432 OR7A2PQ8NGA2 310 aa12.07□□□□□ -0.48
ACTN1-219ENST00000556432 OR51F2Q8NH61 342 aa12.07□□□□□ -0.48
ACTN1-219ENST00000556432 OR5AK3PQ8NH89 298 aa12.07□□□□□ -0.48
ACTN1-219ENST00000556432 CKAP2Q8WWK9 683 aa12.07□□□□□ -0.48
ACTN1-219ENST00000556432 ANP32BQ92688 251 aaKnown RBP12.07□□□□□ -0.48
ACTN1-219ENST00000556432 SDF2Q99470 211 aa12.07□□□□□ -0.48
ACTN1-219ENST00000556432 FUT8Q9BYC5 575 aa12.07□□□□□ -0.48
ACTN1-219ENST00000556432 ZNF696Q9H7X3 374 aa12.07□□□□□ -0.48
ACTN1-219ENST00000556432 TNFRSF12AQ9NP84 129 aa12.07□□□□□ -0.48
ACTN1-219ENST00000556432 GPATCH2Q9NW75 528 aa12.07□□□□□ -0.48
ACTN1-219ENST00000556432 CCL27Q9Y4X3 112 aa12.07□□□□□ -0.48
ACTN1-219ENST00000556432 A0A0G2JK05 382 aa12.06□□□□□ -0.48
ACTN1-219ENST00000556432 CENPVL1A0A0U1RR11 272 aa12.06□□□□□ -0.48
ACTN1-219ENST00000556432 EXOC1LA0A1B0GW35 172 aa12.06□□□□□ -0.48
ACTN1-219ENST00000556432 ZNF587BE7ETH6 402 aa12.06□□□□□ -0.48
ACTN1-219ENST00000556432 H3BQF6 201 aa12.06□□□□□ -0.48
ACTN1-219ENST00000556432 CFLARO15519 480 aa12.06□□□□□ -0.48
ACTN1-219ENST00000556432 DNAJA2O60884 412 aa12.06□□□□□ -0.48
ACTN1-219ENST00000556432 LGI1O95970 557 aa12.06□□□□□ -0.48
ACTN1-219ENST00000556432 SAGP10523 405 aaPredicted RBP12.06□□□□□ -0.48
ACTN1-219ENST00000556432 PRPH2P23942 346 aa12.06□□□□□ -0.48
ACTN1-219ENST00000556432 CALCRP30988 508 aa12.06□□□□□ -0.48
ACTN1-219ENST00000556432 THBS4P35443 961 aa12.06□□□□□ -0.48
ACTN1-219ENST00000556432 GPR6P46095 362 aaPredicted RBP12.06□□□□□ -0.48
ACTN1-219ENST00000556432 KHKP50053 298 aa12.06□□□□□ -0.48
ACTN1-219ENST00000556432 ZNF141Q15928 474 aa12.06□□□□□ -0.48
ACTN1-219ENST00000556432 LIPMQ5VYY2 423 aa12.06□□□□□ -0.48
ACTN1-219ENST00000556432 OLIG3Q7RTU3 272 aa12.06□□□□□ -0.48
ACTN1-219ENST00000556432 GRINAQ7Z429 371 aa12.06□□□□□ -0.48
ACTN1-219ENST00000556432 CDK20Q8IZL9 346 aa12.06□□□□□ -0.48
ACTN1-219ENST00000556432 TEX29Q8N6K0 151 aa12.06□□□□□ -0.48
ACTN1-219ENST00000556432 CLDND2Q8NHS1 167 aa12.06□□□□□ -0.48
ACTN1-219ENST00000556432 MTERF3Q96E29 417 aa12.06□□□□□ -0.48
ACTN1-219ENST00000556432 CCDC126Q96EE4 140 aa12.06□□□□□ -0.48
ACTN1-219ENST00000556432 AURKBQ96GD4 344 aaPredicted RBP12.06□□□□□ -0.48
ACTN1-219ENST00000556432 ANKRD27Q96NW4 1050 aa12.06□□□□□ -0.48
ACTN1-219ENST00000556432 SUCNR1Q9BXA5 334 aa12.06□□□□□ -0.48
ACTN1-219ENST00000556432 TREM2Q9NZC2 230 aa12.06□□□□□ -0.48
ACTN1-219ENST00000556432 MKLN1Q9UL63 735 aa12.06□□□□□ -0.48
ACTN1-219ENST00000556432 TRAPPC4Q9Y296 219 aa12.06□□□□□ -0.48
ACTN1-219ENST00000556432 LOC105371242A0A075B767 164 aa12.05□□□□□ -0.48
ACTN1-219ENST00000556432 A0A096LPE4 126 aa12.05□□□□□ -0.48
ACTN1-219ENST00000556432 A0A1W2PPZ6 126 aa12.05□□□□□ -0.48
ACTN1-219ENST00000556432 OR6C65A6NJZ3 312 aa12.05□□□□□ -0.48
ACTN1-219ENST00000556432 NR5A2O00482 541 aa12.05□□□□□ -0.48
ACTN1-219ENST00000556432 SCAMP2O15127 329 aaKnown RBP12.05□□□□□ -0.48
ACTN1-219ENST00000556432 STX11O75558 287 aa12.05□□□□□ -0.48
ACTN1-219ENST00000556432 C6orf47O95873 294 aa12.05□□□□□ -0.48
ACTN1-219ENST00000556432 TFP02787 698 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms