RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 HTR2AP28223 471 aa8.63□□□□□ -1.03
SRP54-210ENST00000556380 TACR3P29371 465 aa8.63□□□□□ -1.03
SRP54-210ENST00000556380 OPRM1P35372 400 aa8.63□□□□□ -1.03
SRP54-210ENST00000556380 KCNJ5P48544 419 aa8.63□□□□□ -1.03
SRP54-210ENST00000556380 CLK1P49759 484 aaKnown RBP8.63□□□□□ -1.03
SRP54-210ENST00000556380 POLR2HP52434 150 aaKnown RBP8.63□□□□□ -1.03
SRP54-210ENST00000556380 MAP2K6P52564 334 aa8.63□□□□□ -1.03
SRP54-210ENST00000556380 RAC3P60763 192 aa8.63□□□□□ -1.03
SRP54-210ENST00000556380 HOXC5Q00444 222 aa8.63□□□□□ -1.03
SRP54-210ENST00000556380 NRF1Q16656 503 aa8.63□□□□□ -1.03
SRP54-210ENST00000556380 FBXL19-AS1Q494R0 122 aa8.63□□□□□ -1.03
SRP54-210ENST00000556380 EEF1A1P5Q5VTE0 462 aa8.63□□□□□ -1.03
SRP54-210ENST00000556380 WBP2NLQ6ICG8 309 aa8.63□□□□□ -1.03
SRP54-210ENST00000556380 OR2A2Q6IF42 318 aa8.63□□□□□ -1.03
SRP54-210ENST00000556380 C3orf33Q6P1S2 294 aa8.63□□□□□ -1.03
SRP54-210ENST00000556380 TMPPEQ6ZT21 453 aa8.63□□□□□ -1.03
SRP54-210ENST00000556380 PATL1Q86TB9 770 aaKnown RBP8.63□□□□□ -1.03
SRP54-210ENST00000556380 ARMC8Q8IUR7 673 aa8.63□□□□□ -1.03
SRP54-210ENST00000556380 ZNF295-AS1Q8N0V1 137 aa8.63□□□□□ -1.03
SRP54-210ENST00000556380 FITM2Q8N6M3 262 aa8.63□□□□□ -1.03
SRP54-210ENST00000556380 LSMEM1Q8N8F7 131 aa8.63□□□□□ -1.03
SRP54-210ENST00000556380 SMYD1Q8NB12 490 aa8.63□□□□□ -1.03
SRP54-210ENST00000556380 ATP6V1C2Q8NEY4 427 aa8.63□□□□□ -1.03
SRP54-210ENST00000556380 BHLHE22Q8NFJ8 381 aaPredicted RBP8.63□□□□□ -1.03
SRP54-210ENST00000556380 SLC25A43Q8WUT9 341 aaPredicted RBP8.63□□□□□ -1.03
SRP54-210ENST00000556380 C3orf49Q96BT1 292 aa8.63□□□□□ -1.03
SRP54-210ENST00000556380 INTS12Q96CB8 462 aaKnown RBP8.63□□□□□ -1.03
SRP54-210ENST00000556380 STARD4Q96DR4 205 aa8.63□□□□□ -1.03
SRP54-210ENST00000556380 LRRC37BQ96QE4 947 aa8.63□□□□□ -1.03
SRP54-210ENST00000556380 ARHGDIGQ99819 225 aa8.63□□□□□ -1.03
SRP54-210ENST00000556380 SPOCK3Q9BQ16 436 aa8.63□□□□□ -1.03
SRP54-210ENST00000556380 SFXN3Q9BWM7 321 aa8.63□□□□□ -1.03
SRP54-210ENST00000556380 ENKD1Q9H0I2 346 aa8.63□□□□□ -1.03
SRP54-210ENST00000556380 ARMC7Q9H6L4 198 aa8.63□□□□□ -1.03
SRP54-210ENST00000556380 SERINC1Q9NRX5 453 aa8.63□□□□□ -1.03
SRP54-210ENST00000556380 ARL8BQ9NVJ2 186 aa8.63□□□□□ -1.03
SRP54-210ENST00000556380 ABCD2Q9UBJ2 740 aa8.63□□□□□ -1.03
SRP54-210ENST00000556380 ING1Q9UK53 422 aaPredicted RBP8.63□□□□□ -1.03
SRP54-210ENST00000556380 TMED7Q9Y3B3 224 aa8.63□□□□□ -1.03
SRP54-210ENST00000556380 SPG11Q96JI7 2443 aa8.62□□□□□ -1.03
SRP54-210ENST00000556380 A0A1W2PNR3 127 aa8.62□□□□□ -1.03
SRP54-210ENST00000556380 TMEM72A0PK05 275 aa8.62□□□□□ -1.03
SRP54-210ENST00000556380 ZC3H12DA2A288 527 aaKnown RBP8.62□□□□□ -1.03
SRP54-210ENST00000556380 FAM90A27PA6NNH2 459 aa8.62□□□□□ -1.03
SRP54-210ENST00000556380 FAM220BPB1ANY3 271 aa8.62□□□□□ -1.03
SRP54-210ENST00000556380 DVL2O14641 736 aa8.62□□□□□ -1.03
SRP54-210ENST00000556380 NPIPB7O75200 414 aa8.62□□□□□ -1.03
SRP54-210ENST00000556380 DCTN3O75935 186 aa8.62□□□□□ -1.03
SRP54-210ENST00000556380 CGAP01215 116 aa8.62□□□□□ -1.03
SRP54-210ENST00000556380 C8BP07358 591 aa8.62□□□□□ -1.03
SRP54-210ENST00000556380 UQCRBP14927 111 aa8.62□□□□□ -1.03
SRP54-210ENST00000556380 KLK2P20151 261 aa8.62□□□□□ -1.03
SRP54-210ENST00000556380 BMP5P22003 454 aa8.62□□□□□ -1.03
SRP54-210ENST00000556380 ENPP1P22413 925 aa8.62□□□□□ -1.03
SRP54-210ENST00000556380 GSK3BP49841 420 aa8.62□□□□□ -1.03
SRP54-210ENST00000556380 NUDT2P50583 147 aa8.62□□□□□ -1.03
SRP54-210ENST00000556380 SLC7A2P52569 658 aa8.62□□□□□ -1.03
SRP54-210ENST00000556380 AGFG1P52594 562 aaKnown RBP8.62□□□□□ -1.03
SRP54-210ENST00000556380 PSME3P61289 254 aa8.62□□□□□ -1.03
SRP54-210ENST00000556380 H3F3AP84243 136 aa8.62□□□□□ -1.03
SRP54-210ENST00000556380 LIPEQ05469 1076 aa8.62□□□□□ -1.03
SRP54-210ENST00000556380 MYBPHQ13203 477 aa8.62□□□□□ -1.03
SRP54-210ENST00000556380 KRT72Q14CN4 511 aa8.62□□□□□ -1.03
SRP54-210ENST00000556380 NPTX1Q15818 432 aa8.62□□□□□ -1.03
SRP54-210ENST00000556380 SGCBQ16585 318 aa8.62□□□□□ -1.03
SRP54-210ENST00000556380 ZNF239Q16600 458 aaKnown RBP8.62□□□□□ -1.03
SRP54-210ENST00000556380 SYT14P1Q58G82 188 aa8.62□□□□□ -1.03
SRP54-210ENST00000556380 ARSJQ5FYB0 599 aaPredicted RBP8.62□□□□□ -1.03
SRP54-210ENST00000556380 PDSS1Q5T2R2 415 aa8.62□□□□□ -1.03
SRP54-210ENST00000556380 INTS11Q5TA45 600 aaKnown RBP8.62□□□□□ -1.03
SRP54-210ENST00000556380 GKAP1Q5VSY0 366 aaPredicted RBP8.62□□□□□ -1.03
SRP54-210ENST00000556380 ERICH5Q6P6B1 374 aa8.62□□□□□ -1.03
SRP54-210ENST00000556380 C6orf89Q6UWU4 347 aa8.62□□□□□ -1.03
SRP54-210ENST00000556380 BTLAQ7Z6A9 289 aa8.62□□□□□ -1.03
SRP54-210ENST00000556380 ARPINQ7Z6K5 226 aa8.62□□□□□ -1.03
SRP54-210ENST00000556380 ATG4DQ86TL0 474 aaPredicted RBP8.62□□□□□ -1.03
SRP54-210ENST00000556380 GCNT2Q8N0V5 402 aa8.62□□□□□ -1.03
SRP54-210ENST00000556380 OR4D11Q8NGI4 311 aa8.62□□□□□ -1.03
SRP54-210ENST00000556380 RNF128Q8TEB7 428 aa8.62□□□□□ -1.03
SRP54-210ENST00000556380 ROBO4Q8WZ75 1007 aa8.62□□□□□ -1.03
SRP54-210ENST00000556380 ARL5BQ96KC2 179 aa8.62□□□□□ -1.03
SRP54-210ENST00000556380 OR5B2Q96R09 309 aa8.62□□□□□ -1.03
SRP54-210ENST00000556380 OR11A1Q9GZK7 315 aa8.62□□□□□ -1.03
SRP54-210ENST00000556380 ALG2Q9H553 416 aa8.62□□□□□ -1.03
SRP54-210ENST00000556380 EVA1AQ9H8M9 152 aa8.62□□□□□ -1.03
SRP54-210ENST00000556380 CACYBPQ9HB71 228 aaKnown RBP8.62□□□□□ -1.03
SRP54-210ENST00000556380 CHST11Q9NPF2 352 aa8.62□□□□□ -1.03
SRP54-210ENST00000556380 TIGARQ9NQ88 270 aa8.62□□□□□ -1.03
SRP54-210ENST00000556380 TMEM181Q9P2C4 612 aa8.62□□□□□ -1.03
SRP54-210ENST00000556380 TRAPPC4Q9Y296 219 aa8.62□□□□□ -1.03
SRP54-210ENST00000556380 HDGFL3Q9Y3E1 203 aa8.62□□□□□ -1.03
SRP54-210ENST00000556380 A0A1B0GWA3 101 aa8.61□□□□□ -1.03
SRP54-210ENST00000556380 ELOVL7A1L3X0 281 aa8.61□□□□□ -1.03
SRP54-210ENST00000556380 A8MXE2 369 aa8.61□□□□□ -1.03
SRP54-210ENST00000556380 SMAD9O15198 467 aaKnown RBP8.61□□□□□ -1.03
SRP54-210ENST00000556380 FMO6PO60774 539 aa8.61□□□□□ -1.03
SRP54-210ENST00000556380 SS18L1O75177 396 aaPredicted RBP8.61□□□□□ -1.03
SRP54-210ENST00000556380 LYPD3O95274 346 aa8.61□□□□□ -1.03
SRP54-210ENST00000556380 PMS2P2O95744 297 aa8.61□□□□□ -1.03
SRP54-210ENST00000556380 OPN1SWP03999 348 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms