RNA–Protein interactions for RNA: ENST00000556170.5

NEK9-209, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 3,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-209ENST00000556170 OR10A5Q9H207 317 aa13.71□□□□□ -0.21
NEK9-209ENST00000556170 ATPIF1Q9UII2 106 aa13.71□□□□□ -0.21
NEK9-209ENST00000556170 TCF20Q9UGU0 1960 aaKnown RBP13.71□□□□□ -0.22
NEK9-209ENST00000556170 ABCA7Q8IZY2 2146 aa13.71□□□□□ -0.22
NEK9-209ENST00000556170 A0A0B4J203 849 aa13.71□□□□□ -0.22
NEK9-209ENST00000556170 A0A0G2JMP0 313 aa13.71□□□□□ -0.22
NEK9-209ENST00000556170 TEX13CA0A0J9YWL9 993 aa13.71□□□□□ -0.22
NEK9-209ENST00000556170 A0A0X1KG70 313 aa13.71□□□□□ -0.22
NEK9-209ENST00000556170 ZNF879B4DU55 563 aa13.71□□□□□ -0.22
NEK9-209ENST00000556170 SLC35E2P0CK97 266 aa13.71□□□□□ -0.22
NEK9-209ENST00000556170 GUCA1AP43080 201 aaPredicted RBP13.71□□□□□ -0.22
NEK9-209ENST00000556170 TEKQ02763 1124 aa13.71□□□□□ -0.22
NEK9-209ENST00000556170 DUSP8Q13202 625 aa13.71□□□□□ -0.22
NEK9-209ENST00000556170 TMEM184AQ6ZMB5 413 aa13.71□□□□□ -0.22
NEK9-209ENST00000556170 ESPNLQ6ZVH7 1005 aa13.71□□□□□ -0.22
NEK9-209ENST00000556170 ATCAYQ86WG3 371 aa13.71□□□□□ -0.22
NEK9-209ENST00000556170 RASGRP3Q8IV61 690 aa13.71□□□□□ -0.22
NEK9-209ENST00000556170 OR8H3Q8N146 312 aa13.71□□□□□ -0.22
NEK9-209ENST00000556170 CLDN22Q8N7P3 220 aa13.71□□□□□ -0.22
NEK9-209ENST00000556170 OR4M2Q8NGB6 313 aa13.71□□□□□ -0.22
NEK9-209ENST00000556170 COMMD4Q9H0A8 199 aa13.71□□□□□ -0.22
NEK9-209ENST00000556170 ZNF576Q9H609 170 aa13.71□□□□□ -0.22
NEK9-209ENST00000556170 SLC25A19Q9HC21 320 aa13.71□□□□□ -0.22
NEK9-209ENST00000556170 TESQ9UGI8 421 aaKnown RBP13.71□□□□□ -0.22
NEK9-209ENST00000556170 H0YC42 278 aa13.7□□□□□ -0.22
NEK9-209ENST00000556170 CSN2P05814 226 aa13.7□□□□□ -0.22
NEK9-209ENST00000556170 CD38P28907 300 aa13.7□□□□□ -0.22
NEK9-209ENST00000556170 TAF13Q15543 124 aa13.7□□□□□ -0.22
NEK9-209ENST00000556170 CLPPQ16740 277 aaPredicted RBP13.7□□□□□ -0.22
NEK9-209ENST00000556170 MED25Q71SY5 747 aa13.7□□□□□ -0.22
NEK9-209ENST00000556170 CCDC190Q86UF4 302 aa13.7□□□□□ -0.22
NEK9-209ENST00000556170 TMPRSS12Q86WS5 348 aa13.7□□□□□ -0.22
NEK9-209ENST00000556170 OR4C3Q8NH37 302 aa13.7□□□□□ -0.22
NEK9-209ENST00000556170 SENP5Q96HI0 755 aaPredicted RBP13.7□□□□□ -0.22
NEK9-209ENST00000556170 Q96M85 177 aa13.7□□□□□ -0.22
NEK9-209ENST00000556170 CTRCQ99895 268 aa13.7□□□□□ -0.22
NEK9-209ENST00000556170 THAP7Q9BT49 309 aaPredicted RBP13.7□□□□□ -0.22
NEK9-209ENST00000556170 CACNG6Q9BXT2 260 aa13.7□□□□□ -0.22
NEK9-209ENST00000556170 RXFP3Q9NSD7 469 aa13.7□□□□□ -0.22
NEK9-209ENST00000556170 TNFRSF10CO14798 259 aa13.7□□□□□ -0.22
NEK9-209ENST00000556170 LALBAP00709 142 aa13.7□□□□□ -0.22
NEK9-209ENST00000556170 TACSTD2P09758 323 aa13.7□□□□□ -0.22
NEK9-209ENST00000556170 OR8G3PP0DMU2 310 aa13.7□□□□□ -0.22
NEK9-209ENST00000556170 GNALP38405 381 aa13.7□□□□□ -0.22
NEK9-209ENST00000556170 MNDAP41218 407 aa13.7□□□□□ -0.22
NEK9-209ENST00000556170 ACTC1P68032 377 aa13.7□□□□□ -0.22
NEK9-209ENST00000556170 ACTA1P68133 377 aa13.7□□□□□ -0.22
NEK9-209ENST00000556170 CCDC58Q4VC31 144 aa13.7□□□□□ -0.22
NEK9-209ENST00000556170 ALG10Q5BKT4 473 aa13.7□□□□□ -0.22
NEK9-209ENST00000556170 ZNF362Q5T0B9 420 aaPredicted RBP13.7□□□□□ -0.22
NEK9-209ENST00000556170 FCRL6Q6DN72 434 aa13.7□□□□□ -0.22
NEK9-209ENST00000556170 SLC35F2Q8IXU6 374 aa13.7□□□□□ -0.22
NEK9-209ENST00000556170 SHISA5Q8N114 240 aa13.7□□□□□ -0.22
NEK9-209ENST00000556170 CA13Q8N1Q1 262 aa13.7□□□□□ -0.22
NEK9-209ENST00000556170 ZNF681Q96N22 645 aa13.7□□□□□ -0.22
NEK9-209ENST00000556170 ARHGAP9Q9BRR9 750 aa13.7□□□□□ -0.22
NEK9-209ENST00000556170 IL20Q9NYY1 176 aa13.7□□□□□ -0.22
NEK9-209ENST00000556170 MYEF2Q9P2K5 600 aaKnown RBP13.7□□□□□ -0.22
NEK9-209ENST00000556170 SERTAD3Q9UJW9 196 aa13.7□□□□□ -0.22
NEK9-209ENST00000556170 HRKO00198 91 aa13.7□□□□□ -0.22
NEK9-209ENST00000556170 GP1BBP13224 206 aa13.7□□□□□ -0.22
NEK9-209ENST00000556170 E2F1Q01094 437 aa13.7□□□□□ -0.22
NEK9-209ENST00000556170 SNTB2Q13425 540 aaKnown RBP13.7□□□□□ -0.22
NEK9-209ENST00000556170 ATAD3CQ5T2N8 411 aa13.7□□□□□ -0.22
NEK9-209ENST00000556170 HDDC2Q7Z4H3 204 aa13.7□□□□□ -0.22
NEK9-209ENST00000556170 MS4A15Q8N5U1 240 aa13.7□□□□□ -0.22
NEK9-209ENST00000556170 ABHD4Q8TB40 342 aa13.7□□□□□ -0.22
NEK9-209ENST00000556170 MSANTD3Q96H12 275 aa13.7□□□□□ -0.22
NEK9-209ENST00000556170 ENKD1Q9H0I2 346 aa13.7□□□□□ -0.22
NEK9-209ENST00000556170 FKBP14Q9NWM8 211 aa13.7□□□□□ -0.22
NEK9-209ENST00000556170 MRPS17Q9Y2R5 130 aaKnown RBP13.7□□□□□ -0.22
NEK9-209ENST00000556170 C2orf72A6NCS6 295 aa13.69□□□□□ -0.22
NEK9-209ENST00000556170 DOK2O60496 412 aa13.69□□□□□ -0.22
NEK9-209ENST00000556170 SLC19A2O60779 497 aa13.69□□□□□ -0.22
NEK9-209ENST00000556170 ITGA10O75578 1167 aa13.69□□□□□ -0.22
NEK9-209ENST00000556170 PPM1BO75688 479 aa13.69□□□□□ -0.22
NEK9-209ENST00000556170 SBK2P0C263 348 aa13.69□□□□□ -0.22
NEK9-209ENST00000556170 OR14A2Q96R54 314 aa13.69□□□□□ -0.22
NEK9-209ENST00000556170 GAS2L1Q99501 681 aaPredicted RBP13.69□□□□□ -0.22
NEK9-209ENST00000556170 HCAR1Q9BXC0 346 aa13.69□□□□□ -0.22
NEK9-209ENST00000556170 DPAGT1Q9H3H5 408 aa13.69□□□□□ -0.22
NEK9-209ENST00000556170 MMP17Q9ULZ9 603 aa13.69□□□□□ -0.22
NEK9-209ENST00000556170 PLCL2Q9UPR0 1127 aa13.69□□□□□ -0.22
NEK9-209ENST00000556170 TRDV1A0A1B0GX56 115 aa13.69□□□□□ -0.22
NEK9-209ENST00000556170 TMEM72A0PK05 275 aa13.69□□□□□ -0.22
NEK9-209ENST00000556170 ERGP11308 486 aa13.69□□□□□ -0.22
NEK9-209ENST00000556170 HIST1H1CP16403 213 aaKnown RBP13.69□□□□□ -0.22
NEK9-209ENST00000556170 RPS5P46782 204 aaKnown RBP13.69□□□□□ -0.22
NEK9-209ENST00000556170 LSSP48449 732 aa13.69□□□□□ -0.22
NEK9-209ENST00000556170 CCDC120Q96HB5 630 aa13.69□□□□□ -0.22
NEK9-209ENST00000556170 SEMA6CQ9H3T2 930 aa13.69□□□□□ -0.22
NEK9-209ENST00000556170 TMEM74BQ9NUR3 256 aa13.69□□□□□ -0.22
NEK9-209ENST00000556170 SMLR1H3BR10 107 aa13.69□□□□□ -0.22
NEK9-209ENST00000556170 LIMS1P48059 325 aa13.69□□□□□ -0.22
NEK9-209ENST00000556170 HNRNPKP61978 463 aaKnown RBP eCLIP13.69□□□□□ -0.22
NEK9-209ENST00000556170 TPBGQ13641 420 aa13.69□□□□□ -0.22
NEK9-209ENST00000556170 BTBD16Q32M84 506 aa13.69□□□□□ -0.22
NEK9-209ENST00000556170 PRAMEF8Q5VWM4 474 aa13.69□□□□□ -0.22
NEK9-209ENST00000556170 PRAMEF7Q5VXH5 474 aa13.69□□□□□ -0.22
NEK9-209ENST00000556170 GPR155Q7Z3F1 870 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms