RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 PNO1Q9NRX1 252 aaKnown RBP6.26□□□□□ -1.41
SLIRP-204ENST00000555890 LANCL2Q9NS86 450 aa6.26□□□□□ -1.41
SLIRP-204ENST00000555890 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.26□□□□□ -1.41
SLIRP-204ENST00000555890 C14orf105Q9NVL8 296 aa6.26□□□□□ -1.41
SLIRP-204ENST00000555890 IMPAD1Q9NX62 359 aa6.26□□□□□ -1.41
SLIRP-204ENST00000555890 DHCR7Q9UBM7 475 aaKnown RBP6.26□□□□□ -1.41
SLIRP-204ENST00000555890 ERRFI1Q9UJM3 462 aaPredicted RBP6.26□□□□□ -1.41
SLIRP-204ENST00000555890 MRTO4Q9UKD2 239 aaKnown RBP6.26□□□□□ -1.41
SLIRP-204ENST00000555890 RARRES3Q9UL19 164 aa6.26□□□□□ -1.41
SLIRP-204ENST00000555890 ERVK-19Q9WJR5 959 aa6.26□□□□□ -1.41
SLIRP-204ENST00000555890 RPH3AQ9Y2J0 694 aaPredicted RBP6.26□□□□□ -1.41
SLIRP-204ENST00000555890 OR10H1Q9Y4A9 318 aa6.26□□□□□ -1.41
SLIRP-204ENST00000555890 CLCA3PQ9Y6N3 262 aa6.26□□□□□ -1.41
SLIRP-204ENST00000555890 U3KQA8 63 aa6.26□□□□□ -1.41
SLIRP-204ENST00000555890 EPPK1P58107 5090 aaKnown RBP6.25□□□□□ -1.41
SLIRP-204ENST00000555890 IGHV5-10-1A0A0J9YXX1 117 aa6.25□□□□□ -1.41
SLIRP-204ENST00000555890 A0A1W2PQM1 296 aa6.25□□□□□ -1.41
SLIRP-204ENST00000555890 GXYLT2A0PJZ3 443 aa6.25□□□□□ -1.41
SLIRP-204ENST00000555890 TRAPPC13A5PLN9 417 aa6.25□□□□□ -1.41
SLIRP-204ENST00000555890 CPSF4LA6NMK7 179 aaKnown RBP6.25□□□□□ -1.41
SLIRP-204ENST00000555890 ZAR1LA6NP61 321 aa6.25□□□□□ -1.41
SLIRP-204ENST00000555890 PTGES3LE9PB15 166 aa6.25□□□□□ -1.41
SLIRP-204ENST00000555890 H3BN98 237 aa6.25□□□□□ -1.41
SLIRP-204ENST00000555890 TPST2O60704 377 aa6.25□□□□□ -1.41
SLIRP-204ENST00000555890 CSO75390 466 aaKnown RBP6.25□□□□□ -1.41
SLIRP-204ENST00000555890 JUNBP17275 347 aaPredicted RBP6.25□□□□□ -1.41
SLIRP-204ENST00000555890 WT1P19544 449 aaPredicted RBP6.25□□□□□ -1.41
SLIRP-204ENST00000555890 DRD5P21918 477 aa6.25□□□□□ -1.41
SLIRP-204ENST00000555890 ENPP1P22413 925 aa6.25□□□□□ -1.41
SLIRP-204ENST00000555890 CHMP24386 653 aa6.25□□□□□ -1.41
SLIRP-204ENST00000555890 POU1F1P28069 291 aa6.25□□□□□ -1.41
SLIRP-204ENST00000555890 KRT20P35900 424 aa6.25□□□□□ -1.41
SLIRP-204ENST00000555890 RFX3P48380 749 aa6.25□□□□□ -1.41
SLIRP-204ENST00000555890 IDH2P48735 452 aaKnown RBP6.25□□□□□ -1.41
SLIRP-204ENST00000555890 DCAF7P61962 342 aa6.25□□□□□ -1.41
SLIRP-204ENST00000555890 PSG6Q00889 435 aa6.25□□□□□ -1.41
SLIRP-204ENST00000555890 OCA2Q04671 838 aa6.25□□□□□ -1.41
SLIRP-204ENST00000555890 TRA2AQ13595 282 aaKnown RBP eCLIP6.25□□□□□ -1.41
SLIRP-204ENST00000555890 TUBA3CQ13748 450 aa6.25□□□□□ -1.41
SLIRP-204ENST00000555890 PTGES3Q15185 160 aaKnown RBP6.25□□□□□ -1.41
SLIRP-204ENST00000555890 SEC23BQ15437 767 aa6.25□□□□□ -1.41
SLIRP-204ENST00000555890 ELAVL1Q15717 326 aaKnown RBP6.25□□□□□ -1.41
SLIRP-204ENST00000555890 CNPY1Q3B7I2 92 aa6.25□□□□□ -1.41
SLIRP-204ENST00000555890 C1orf189Q5VU69 101 aa6.25□□□□□ -1.41
SLIRP-204ENST00000555890 HLA-DQA1Q5Y7H0 255 aa6.25□□□□□ -1.41
SLIRP-204ENST00000555890 C1orf94Q6P1W5 598 aa6.25□□□□□ -1.41
SLIRP-204ENST00000555890 PGBD2Q6P3X8 592 aa6.25□□□□□ -1.41
SLIRP-204ENST00000555890 CASP12Q6UXS9 341 aa6.25□□□□□ -1.41
SLIRP-204ENST00000555890 CD300LDQ6UXZ3 194 aa6.25□□□□□ -1.41
SLIRP-204ENST00000555890 ZNF730Q6ZMV8 503 aa6.25□□□□□ -1.41
SLIRP-204ENST00000555890 PTCHD4Q6ZW05 846 aa6.25□□□□□ -1.41
SLIRP-204ENST00000555890 ZNF550Q7Z398 422 aa6.25□□□□□ -1.41
SLIRP-204ENST00000555890 COMTD1Q86VU5 262 aa6.25□□□□□ -1.41
SLIRP-204ENST00000555890 NLGN4XQ8N0W4 816 aa6.25□□□□□ -1.41
SLIRP-204ENST00000555890 SHISA5Q8N114 240 aa6.25□□□□□ -1.41
SLIRP-204ENST00000555890 ZNF615Q8N8J6 731 aa6.25□□□□□ -1.41
SLIRP-204ENST00000555890 ZBTB34Q8NCN2 500 aa6.25□□□□□ -1.41
SLIRP-204ENST00000555890 OR14A16Q8NHC5 309 aa6.25□□□□□ -1.41
SLIRP-204ENST00000555890 RHOXF1Q8NHV9 184 aa6.25□□□□□ -1.41
SLIRP-204ENST00000555890 CNIH3Q8TBE1 160 aa6.25□□□□□ -1.41
SLIRP-204ENST00000555890 FAM81AQ8TBF8 368 aa6.25□□□□□ -1.41
SLIRP-204ENST00000555890 IFI44Q8TCB0 444 aa6.25□□□□□ -1.41
SLIRP-204ENST00000555890 ZDHHC19Q8WVZ1 309 aaPredicted RBP6.25□□□□□ -1.41
SLIRP-204ENST00000555890 OIT3Q8WWZ8 545 aa6.25□□□□□ -1.41
SLIRP-204ENST00000555890 ACOT11Q8WXI4 607 aaPredicted RBP6.25□□□□□ -1.41
SLIRP-204ENST00000555890 TMEM158Q8WZ71 300 aa6.25□□□□□ -1.41
SLIRP-204ENST00000555890 DAZLQ92904 295 aaKnown RBP6.25□□□□□ -1.41
SLIRP-204ENST00000555890 MYDGFQ969H8 173 aa6.25□□□□□ -1.41
SLIRP-204ENST00000555890 SLC35B4Q969S0 331 aa6.25□□□□□ -1.41
SLIRP-204ENST00000555890 ARSGQ96EG1 525 aa6.25□□□□□ -1.41
SLIRP-204ENST00000555890 SLC41A3Q96GZ6 507 aa6.25□□□□□ -1.41
SLIRP-204ENST00000555890 SENP5Q96HI0 755 aaPredicted RBP6.25□□□□□ -1.41
SLIRP-204ENST00000555890 Q96MT0 163 aa6.25□□□□□ -1.41
SLIRP-204ENST00000555890 TSC22D3Q99576 134 aa6.25□□□□□ -1.41
SLIRP-204ENST00000555890 KRTAP4-12Q9BQ66 201 aa6.25□□□□□ -1.41
SLIRP-204ENST00000555890 WFDC6Q9BQY6 131 aa6.25□□□□□ -1.41
SLIRP-204ENST00000555890 ZNF559Q9BR84 538 aa6.25□□□□□ -1.41
SLIRP-204ENST00000555890 FUZQ9BT04 418 aa6.25□□□□□ -1.41
SLIRP-204ENST00000555890 TEX12Q9BXU0 123 aa6.25□□□□□ -1.41
SLIRP-204ENST00000555890 YIPF3Q9GZM5 350 aa6.25□□□□□ -1.41
SLIRP-204ENST00000555890 CCDC90BQ9GZT6 254 aa6.25□□□□□ -1.41
SLIRP-204ENST00000555890 TMEM27Q9HBJ8 222 aa6.25□□□□□ -1.41
SLIRP-204ENST00000555890 RASSF1Q9NS23 344 aa6.25□□□□□ -1.41
SLIRP-204ENST00000555890 PLCXD1Q9NUJ7 323 aa6.25□□□□□ -1.41
SLIRP-204ENST00000555890 CLN6Q9NWW5 311 aa6.25□□□□□ -1.41
SLIRP-204ENST00000555890 COPS7AQ9UBW8 275 aa6.25□□□□□ -1.41
SLIRP-204ENST00000555890 TESQ9UGI8 421 aaKnown RBP6.25□□□□□ -1.41
SLIRP-204ENST00000555890 RNF6Q9Y252 685 aa6.25□□□□□ -1.41
SLIRP-204ENST00000555890 TMEM184BQ9Y519 407 aaPredicted RBP6.25□□□□□ -1.41
SLIRP-204ENST00000555890 ESPL1Q14674 2120 aa6.25□□□□□ -1.41
SLIRP-204ENST00000555890 A0A087WUU8 490 aa6.24□□□□□ -1.41
SLIRP-204ENST00000555890 IGKV3D-11A0A0A0MRZ8 115 aa6.24□□□□□ -1.41
SLIRP-204ENST00000555890 SH3D21A4FU49 640 aa6.24□□□□□ -1.41
SLIRP-204ENST00000555890 CDHR4A6H8M9 788 aa6.24□□□□□ -1.41
SLIRP-204ENST00000555890 OR2W5A6NFC9 320 aa6.24□□□□□ -1.41
SLIRP-204ENST00000555890 A8MUA0 341 aa6.24□□□□□ -1.41
SLIRP-204ENST00000555890 H3BSA7 217 aa6.24□□□□□ -1.41
SLIRP-204ENST00000555890 ZNF701M0R085 212 aaPredicted RBP6.24□□□□□ -1.41
SLIRP-204ENST00000555890 PEX12O00623 359 aa6.24□□□□□ -1.41
SLIRP-204ENST00000555890 SCDO00767 359 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms