RNA–Protein interactions for RNA: ENST00000555855.5

FOXN3-211, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 851 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-211ENST00000555855 VWC2LB2RUY7 222 aa17■□□□□ 0.31
FOXN3-211ENST00000555855 EIF1BO60739 113 aaKnown RBP17■□□□□ 0.31
FOXN3-211ENST00000555855 TGFAP01135 160 aa17■□□□□ 0.31
FOXN3-211ENST00000555855 CCNA2P20248 432 aa17■□□□□ 0.31
FOXN3-211ENST00000555855 PGM1P36871 562 aa17■□□□□ 0.31
FOXN3-211ENST00000555855 SRSF2Q01130 221 aaKnown RBP17■□□□□ 0.31
FOXN3-211ENST00000555855 ARFGEF3Q5TH69 2177 aa17■□□□□ 0.31
FOXN3-211ENST00000555855 ADGRG3Q86Y34 549 aa17■□□□□ 0.31
FOXN3-211ENST00000555855 C4orf33Q8N1A6 199 aa17■□□□□ 0.31
FOXN3-211ENST00000555855 ZNF540Q8NDQ6 660 aa17■□□□□ 0.31
FOXN3-211ENST00000555855 AGR3Q8TD06 166 aa17■□□□□ 0.31
FOXN3-211ENST00000555855 XAGE5Q8WWM1 108 aa17■□□□□ 0.31
FOXN3-211ENST00000555855 OIT3Q8WWZ8 545 aa17■□□□□ 0.31
FOXN3-211ENST00000555855 PMM1Q92871 262 aa17■□□□□ 0.31
FOXN3-211ENST00000555855 MSI2Q96DH6 328 aaKnown RBP17■□□□□ 0.31
FOXN3-211ENST00000555855 VRK1Q99986 396 aaPredicted RBP17■□□□□ 0.31
FOXN3-211ENST00000555855 ZNF350Q9GZX5 532 aa17■□□□□ 0.31
FOXN3-211ENST00000555855 MYOZ1Q9NP98 299 aaPredicted RBP17■□□□□ 0.31
FOXN3-211ENST00000555855 SLC9A8Q9Y2E8 581 aa17■□□□□ 0.31
FOXN3-211ENST00000555855 LOC390937A0A1W2PQ73 354 aa16.99■□□□□ 0.31
FOXN3-211ENST00000555855 PDLIM1O00151 329 aa16.99■□□□□ 0.31
FOXN3-211ENST00000555855 KIAA0513O60268 411 aa16.99■□□□□ 0.31
FOXN3-211ENST00000555855 HTR3AP46098 478 aa16.99■□□□□ 0.31
FOXN3-211ENST00000555855 SNRPD2P62316 118 aaKnown RBP16.99■□□□□ 0.31
FOXN3-211ENST00000555855 SLC35A1P78382 337 aa16.99■□□□□ 0.31
FOXN3-211ENST00000555855 SWI5Q1ZZU3 235 aa16.99■□□□□ 0.31
FOXN3-211ENST00000555855 OLIG3Q7RTU3 272 aa16.99■□□□□ 0.31
FOXN3-211ENST00000555855 RIMKLAQ8IXN7 391 aa16.99■□□□□ 0.31
FOXN3-211ENST00000555855 ARFGAP2Q8N6H7 521 aa16.99■□□□□ 0.31
FOXN3-211ENST00000555855 DDIT4LQ96D03 193 aa16.99■□□□□ 0.31
FOXN3-211ENST00000555855 FOXN4Q96NZ1 517 aa16.99■□□□□ 0.31
FOXN3-211ENST00000555855 KCNS3Q9BQ31 491 aa16.99■□□□□ 0.31
FOXN3-211ENST00000555855 PRR14Q9BWN1 585 aa16.99■□□□□ 0.31
FOXN3-211ENST00000555855 OR11A1Q9GZK7 315 aa16.99■□□□□ 0.31
FOXN3-211ENST00000555855 OR51I1Q9H343 314 aa16.99■□□□□ 0.31
FOXN3-211ENST00000555855 POLE3Q9NRF9 147 aa16.99■□□□□ 0.31
FOXN3-211ENST00000555855 SLC7A10Q9NS82 523 aa16.99■□□□□ 0.31
FOXN3-211ENST00000555855 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.99■□□□□ 0.31
FOXN3-211ENST00000555855 MOKQ9UQ07 419 aa16.99■□□□□ 0.31
FOXN3-211ENST00000555855 WDR45Q9Y484 360 aa16.99■□□□□ 0.31
FOXN3-211ENST00000555855 CENPVL1A0A0U1RR11 272 aa16.98■□□□□ 0.31
FOXN3-211ENST00000555855 RNF103-CHMP3A0A140T963 221 aa16.98■□□□□ 0.31
FOXN3-211ENST00000555855 ATP6V1G2-DDX39BF2Z307 99 aa16.98■□□□□ 0.31
FOXN3-211ENST00000555855 SHBGP04278 402 aa16.98■□□□□ 0.31
FOXN3-211ENST00000555855 OR12D1P0DN82 309 aa16.98■□□□□ 0.31
FOXN3-211ENST00000555855 MPGP29372 298 aa16.98■□□□□ 0.31
FOXN3-211ENST00000555855 ALDH3A1P30838 453 aa16.98■□□□□ 0.31
FOXN3-211ENST00000555855 IDH2P48735 452 aaKnown RBP16.98■□□□□ 0.31
FOXN3-211ENST00000555855 H3F3AP84243 136 aa16.98■□□□□ 0.31
FOXN3-211ENST00000555855 MAD2L1Q13257 205 aaPredicted RBP16.98■□□□□ 0.31
FOXN3-211ENST00000555855 MAPK14Q16539 360 aa16.98■□□□□ 0.31
FOXN3-211ENST00000555855 MST1LQ2TV78 715 aa16.98■□□□□ 0.31
FOXN3-211ENST00000555855 XKR7Q5GH72 579 aa16.98■□□□□ 0.31
FOXN3-211ENST00000555855 TSPO2Q5TGU0 170 aa16.98■□□□□ 0.31
FOXN3-211ENST00000555855 UBLCP1Q8WVY7 318 aaPredicted RBP16.98■□□□□ 0.31
FOXN3-211ENST00000555855 TUBGCP3Q96CW5 907 aa16.98■□□□□ 0.31
FOXN3-211ENST00000555855 C3orf30Q96M34 536 aa16.98■□□□□ 0.31
FOXN3-211ENST00000555855 SERHL2Q9H4I8 314 aa16.98■□□□□ 0.31
FOXN3-211ENST00000555855 FLVCR1Q9Y5Y0 555 aa16.98■□□□□ 0.31
FOXN3-211ENST00000555855 PGRP06401 933 aa16.97■□□□□ 0.31
FOXN3-211ENST00000555855 GUSBP08236 651 aa16.97■□□□□ 0.31
FOXN3-211ENST00000555855 CDH2P19022 906 aaPredicted RBP16.97■□□□□ 0.31
FOXN3-211ENST00000555855 PAX7P23759 505 aa16.97■□□□□ 0.31
FOXN3-211ENST00000555855 SERPINF1P36955 418 aa16.97■□□□□ 0.31
FOXN3-211ENST00000555855 KCNJ10P78508 379 aa16.97■□□□□ 0.31
FOXN3-211ENST00000555855 SLC46A3Q7Z3Q1 461 aa16.97■□□□□ 0.31
FOXN3-211ENST00000555855 ABHD12BQ7Z5M8 362 aaPredicted RBP16.97■□□□□ 0.31
FOXN3-211ENST00000555855 CLEC4FQ8N1N0 589 aa16.97■□□□□ 0.31
FOXN3-211ENST00000555855 FAM71CQ8NEG0 241 aa16.97■□□□□ 0.31
FOXN3-211ENST00000555855 SORCS2Q96PQ0 1159 aa16.97■□□□□ 0.31
FOXN3-211ENST00000555855 EXOSC3Q9NQT5 275 aaKnown RBP16.97■□□□□ 0.31
FOXN3-211ENST00000555855 TMED7-TICAM2A0A0A6YYA0 188 aa16.96■□□□□ 0.31
FOXN3-211ENST00000555855 B9A039 149 aa16.96■□□□□ 0.31
FOXN3-211ENST00000555855 G6PDP11413 515 aa16.96■□□□□ 0.31
FOXN3-211ENST00000555855 CLDN8P56748 225 aa16.96■□□□□ 0.31
FOXN3-211ENST00000555855 SLC17A1Q14916 467 aa16.96■□□□□ 0.31
FOXN3-211ENST00000555855 OR4F3Q6IEY1 312 aa16.96■□□□□ 0.31
FOXN3-211ENST00000555855 TYW3Q6IPR3 259 aaKnown RBP16.96■□□□□ 0.31
FOXN3-211ENST00000555855 CLECL1Q8IZS7 167 aa16.96■□□□□ 0.31
FOXN3-211ENST00000555855 VPS37AQ8NEZ2 397 aa16.96■□□□□ 0.31
FOXN3-211ENST00000555855 OR4A15Q8NGL6 344 aa16.96■□□□□ 0.31
FOXN3-211ENST00000555855 MIPOL1Q8TD10 442 aa16.96■□□□□ 0.31
FOXN3-211ENST00000555855 ROPN1LQ96C74 230 aa16.96■□□□□ 0.31
FOXN3-211ENST00000555855 RHOXF2Q9BQY4 288 aa16.96■□□□□ 0.31
FOXN3-211ENST00000555855 SAP130Q9H0E3 1048 aa16.96■□□□□ 0.31
FOXN3-211ENST00000555855 OBP2BQ9NPH6 170 aa16.96■□□□□ 0.31
FOXN3-211ENST00000555855 TMED7Q9Y3B3 224 aa16.96■□□□□ 0.31
FOXN3-211ENST00000555855 IGHV4-61A0A0C4DH41 118 aa16.95■□□□□ 0.3
FOXN3-211ENST00000555855 VSTM5A8MXK1 200 aa16.95■□□□□ 0.3
FOXN3-211ENST00000555855 RNASET2O00584 256 aaKnown RBP16.95■□□□□ 0.3
FOXN3-211ENST00000555855 KLF11O14901 512 aa16.95■□□□□ 0.3
FOXN3-211ENST00000555855 ZNF208O43345 1280 aa16.95■□□□□ 0.3
FOXN3-211ENST00000555855 SKAP2O75563 359 aaPredicted RBP16.95■□□□□ 0.3
FOXN3-211ENST00000555855 KRT33AO76009 404 aa16.95■□□□□ 0.3
FOXN3-211ENST00000555855 CPSF4O95639 269 aaKnown RBP16.95■□□□□ 0.3
FOXN3-211ENST00000555855 ZNF23P17027 643 aa16.95■□□□□ 0.3
FOXN3-211ENST00000555855 UQCRC2P22695 453 aa16.95■□□□□ 0.3
FOXN3-211ENST00000555855 POLR2HP52434 150 aaKnown RBP16.95■□□□□ 0.3
FOXN3-211ENST00000555855 MAP2K6P52564 334 aa16.95■□□□□ 0.3
FOXN3-211ENST00000555855 HPCAP84074 193 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms