RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 BOKQ9UMX3 212 aaPredicted RBP8.98□□□□□ -0.97
PSEN1-213ENST00000555386 PCNX1Q96RV3 2341 aa8.98□□□□□ -0.97
PSEN1-213ENST00000555386 CDK2AP1O14519 115 aa8.97□□□□□ -0.97
PSEN1-213ENST00000555386 FCMRO60667 390 aa8.97□□□□□ -0.97
PSEN1-213ENST00000555386 SERPINB7O75635 380 aa8.97□□□□□ -0.97
PSEN1-213ENST00000555386 MFN2O95140 757 aa8.97□□□□□ -0.97
PSEN1-213ENST00000555386 ADAP00813 363 aa8.97□□□□□ -0.97
PSEN1-213ENST00000555386 BCHEP06276 602 aa8.97□□□□□ -0.97
PSEN1-213ENST00000555386 CDK1P06493 297 aa8.97□□□□□ -0.97
PSEN1-213ENST00000555386 CELA3AP09093 270 aa8.97□□□□□ -0.97
PSEN1-213ENST00000555386 RFPL3SP0C7P2 107 aa8.97□□□□□ -0.97
PSEN1-213ENST00000555386 GABRB1P18505 474 aa8.97□□□□□ -0.97
PSEN1-213ENST00000555386 GDF1P27539 372 aa8.97□□□□□ -0.97
PSEN1-213ENST00000555386 MAGEA5P43359 124 aa8.97□□□□□ -0.97
PSEN1-213ENST00000555386 OR1E2P47887 323 aa8.97□□□□□ -0.97
PSEN1-213ENST00000555386 BMXP51813 675 aa8.97□□□□□ -0.97
PSEN1-213ENST00000555386 CDC42P60953 191 aa8.97□□□□□ -0.97
PSEN1-213ENST00000555386 HSF1Q00613 529 aa8.97□□□□□ -0.97
PSEN1-213ENST00000555386 MRPL49Q13405 166 aaKnown RBP8.97□□□□□ -0.97
PSEN1-213ENST00000555386 ZNF846Q147U1 533 aa8.97□□□□□ -0.97
PSEN1-213ENST00000555386 SPCS2Q15005 226 aa8.97□□□□□ -0.97
PSEN1-213ENST00000555386 DGUOKQ16854 277 aa8.97□□□□□ -0.97
PSEN1-213ENST00000555386 RPS26P11Q5JNZ5 115 aaPredicted RBP8.97□□□□□ -0.97
PSEN1-213ENST00000555386 PRAMEF8Q5VWM4 474 aa8.97□□□□□ -0.97
PSEN1-213ENST00000555386 PRAMEF7Q5VXH5 474 aa8.97□□□□□ -0.97
PSEN1-213ENST00000555386 RPUSD3Q6P087 351 aaKnown RBP8.97□□□□□ -0.97
PSEN1-213ENST00000555386 APOOLQ6UXV4 268 aa8.97□□□□□ -0.97
PSEN1-213ENST00000555386 LINC00471Q8N535 108 aa8.97□□□□□ -0.97
PSEN1-213ENST00000555386 TMEM251Q8N6I4 163 aa8.97□□□□□ -0.97
PSEN1-213ENST00000555386 OR1J4Q8NGS1 313 aa8.97□□□□□ -0.97
PSEN1-213ENST00000555386 NR4A3Q92570 626 aa8.97□□□□□ -0.97
PSEN1-213ENST00000555386 HOXB13Q92826 284 aaPredicted RBP8.97□□□□□ -0.97
PSEN1-213ENST00000555386 TMEM19Q96HH6 336 aa8.97□□□□□ -0.97
PSEN1-213ENST00000555386 SH3YL1Q96HL8 342 aaPredicted RBP8.97□□□□□ -0.97
PSEN1-213ENST00000555386 PLEKHA8Q96JA3 519 aa8.97□□□□□ -0.97
PSEN1-213ENST00000555386 COPS4Q9BT78 406 aa8.97□□□□□ -0.97
PSEN1-213ENST00000555386 G6PC3Q9BUM1 346 aa8.97□□□□□ -0.97
PSEN1-213ENST00000555386 SPATA5L1Q9BVQ7 753 aa8.97□□□□□ -0.97
PSEN1-213ENST00000555386 ANGPTL4Q9BY76 406 aa8.97□□□□□ -0.97
PSEN1-213ENST00000555386 RTN4RQ9BZR6 473 aa8.97□□□□□ -0.97
PSEN1-213ENST00000555386 WDR12Q9GZL7 423 aaKnown RBP8.97□□□□□ -0.97
PSEN1-213ENST00000555386 QRSL1Q9H0R6 528 aaKnown RBP8.97□□□□□ -0.97
PSEN1-213ENST00000555386 LDAHQ9H6V9 325 aa8.97□□□□□ -0.97
PSEN1-213ENST00000555386 ZFP64Q9NPA5 681 aa8.97□□□□□ -0.97
PSEN1-213ENST00000555386 RASSF1Q9NS23 344 aa8.97□□□□□ -0.97
PSEN1-213ENST00000555386 PPP4R1LQ9P1A2 415 aa8.97□□□□□ -0.97
PSEN1-213ENST00000555386 P2RX2Q9UBL9 471 aa8.97□□□□□ -0.97
PSEN1-213ENST00000555386 TMCC3Q9ULS5 477 aa8.97□□□□□ -0.97
PSEN1-213ENST00000555386 WDR45Q9Y484 360 aa8.97□□□□□ -0.97
PSEN1-213ENST00000555386 PCDHGB6Q9Y5F9 930 aa8.97□□□□□ -0.97
PSEN1-213ENST00000555386 HRH3Q9Y5N1 445 aa8.97□□□□□ -0.97
PSEN1-213ENST00000555386 DSPPQ9NZW4 1301 aa8.97□□□□□ -0.97
PSEN1-213ENST00000555386 PRAMEF27A3QJZ7 478 aa8.96□□□□□ -0.97
PSEN1-213ENST00000555386 LRRC3CA6NJW4 275 aa8.96□□□□□ -0.97
PSEN1-213ENST00000555386 M0R3G1 203 aa8.96□□□□□ -0.97
PSEN1-213ENST00000555386 ACOT7O00154 380 aa8.96□□□□□ -0.97
PSEN1-213ENST00000555386 FAAHO00519 579 aa8.96□□□□□ -0.97
PSEN1-213ENST00000555386 SCDO00767 359 aa8.96□□□□□ -0.97
PSEN1-213ENST00000555386 FADS1O60427 444 aa8.96□□□□□ -0.97
PSEN1-213ENST00000555386 STX11O75558 287 aa8.96□□□□□ -0.97
PSEN1-213ENST00000555386 CYP7B1O75881 506 aa8.96□□□□□ -0.97
PSEN1-213ENST00000555386 SNX4O95219 450 aa8.96□□□□□ -0.97
PSEN1-213ENST00000555386 FADS2O95864 444 aaKnown RBP8.96□□□□□ -0.97
PSEN1-213ENST00000555386 AGR2O95994 175 aa8.96□□□□□ -0.97
PSEN1-213ENST00000555386 TNFRSF1BP20333 461 aa8.96□□□□□ -0.97
PSEN1-213ENST00000555386 PSMB9P28065 219 aa8.96□□□□□ -0.97
PSEN1-213ENST00000555386 UGT2B10P36537 528 aa8.96□□□□□ -0.97
PSEN1-213ENST00000555386 PTGDSP41222 190 aa8.96□□□□□ -0.97
PSEN1-213ENST00000555386 MAP2K4P45985 399 aa8.96□□□□□ -0.97
PSEN1-213ENST00000555386 KCNJ5P48544 419 aa8.96□□□□□ -0.97
PSEN1-213ENST00000555386 TUBA1BP68363 451 aa8.96□□□□□ -0.97
PSEN1-213ENST00000555386 PSPHP78330 225 aa8.96□□□□□ -0.97
PSEN1-213ENST00000555386 CHRNEQ04844 493 aa8.96□□□□□ -0.97
PSEN1-213ENST00000555386 FUT5Q11128 374 aa8.96□□□□□ -0.97
PSEN1-213ENST00000555386 FOXO1Q12778 655 aa8.96□□□□□ -0.97
PSEN1-213ENST00000555386 INAQ16352 499 aa8.96□□□□□ -0.97
PSEN1-213ENST00000555386 SMN1Q16637 294 aaKnown RBP8.96□□□□□ -0.97
PSEN1-213ENST00000555386 NDUFAF6Q330K2 333 aa8.96□□□□□ -0.97
PSEN1-213ENST00000555386 ARHGAP11BQ3KRB8 267 aa8.96□□□□□ -0.97
PSEN1-213ENST00000555386 EXOSC6Q5RKV6 272 aaKnown RBP8.96□□□□□ -0.97
PSEN1-213ENST00000555386 ZNF770Q6IQ21 691 aaPredicted RBP8.96□□□□□ -0.97
PSEN1-213ENST00000555386 SLC30A6Q6NXT4 461 aa8.96□□□□□ -0.97
PSEN1-213ENST00000555386 GFRALQ6UXV0 394 aa8.96□□□□□ -0.97
PSEN1-213ENST00000555386 AHSA2Q719I0 299 aa8.96□□□□□ -0.97
PSEN1-213ENST00000555386 TUBA1AQ71U36 451 aa8.96□□□□□ -0.97
PSEN1-213ENST00000555386 SLC22A16Q86VW1 577 aa8.96□□□□□ -0.97
PSEN1-213ENST00000555386 KRT73Q86Y46 540 aa8.96□□□□□ -0.97
PSEN1-213ENST00000555386 ZFP62Q8NB50 900 aaPredicted RBP8.96□□□□□ -0.97
PSEN1-213ENST00000555386 DRAXINQ8NBI3 349 aaPredicted RBP8.96□□□□□ -0.97
PSEN1-213ENST00000555386 POGLUT1Q8NBL1 392 aa8.96□□□□□ -0.97
PSEN1-213ENST00000555386 OR4K17Q8NGC6 315 aa8.96□□□□□ -0.97
PSEN1-213ENST00000555386 BBS10Q8TAM1 723 aa8.96□□□□□ -0.97
PSEN1-213ENST00000555386 PHOSPHO1Q8TCT1 267 aa8.96□□□□□ -0.97
PSEN1-213ENST00000555386 DUSP19Q8WTR2 217 aa8.96□□□□□ -0.97
PSEN1-213ENST00000555386 SLC38A4Q969I6 547 aa8.96□□□□□ -0.97
PSEN1-213ENST00000555386 ARSGQ96EG1 525 aa8.96□□□□□ -0.97
PSEN1-213ENST00000555386 ALPK1Q96QP1 1244 aa8.96□□□□□ -0.97
PSEN1-213ENST00000555386 SECISBP2Q96T21 854 aaKnown RBP8.96□□□□□ -0.97
PSEN1-213ENST00000555386 NIPSNAP1Q9BPW8 284 aa8.96□□□□□ -0.97
PSEN1-213ENST00000555386 DSN1Q9H410 356 aa8.96□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms