RNA–Protein interactions for RNA: ENST00000555351.1

VRK1-204, Transcript of vaccinia related kinase 1, humanhuman

TSL 2

Gene VRK1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-204ENST00000555351 CLIC1O00299 241 aa10.49□□□□□ -0.73
VRK1-204ENST00000555351 AP3D1O14617 1153 aa10.49□□□□□ -0.73
VRK1-204ENST00000555351 ADAP00813 363 aa10.49□□□□□ -0.73
VRK1-204ENST00000555351 BCHEP06276 602 aa10.49□□□□□ -0.73
VRK1-204ENST00000555351 ETS2P15036 469 aa10.49□□□□□ -0.73
VRK1-204ENST00000555351 TACR3P29371 465 aa10.49□□□□□ -0.73
VRK1-204ENST00000555351 NKX6-1P78426 367 aaPredicted RBP10.49□□□□□ -0.73
VRK1-204ENST00000555351 FOXD4Q12950 439 aaPredicted RBP10.49□□□□□ -0.73
VRK1-204ENST00000555351 TTMPQ5BVD1 217 aa10.49□□□□□ -0.73
VRK1-204ENST00000555351 WBP2NLQ6ICG8 309 aa10.49□□□□□ -0.73
VRK1-204ENST00000555351 PAQR6Q6TCH4 344 aa10.49□□□□□ -0.73
VRK1-204ENST00000555351 DNAJC14Q6Y2X3 702 aaPredicted RBP10.49□□□□□ -0.73
VRK1-204ENST00000555351 ZNF611Q8N823 705 aa10.49□□□□□ -0.73
VRK1-204ENST00000555351 BBS10Q8TAM1 723 aa10.49□□□□□ -0.73
VRK1-204ENST00000555351 DYDC1Q8WWB3 177 aa10.49□□□□□ -0.73
VRK1-204ENST00000555351 TMEM19Q96HH6 336 aa10.49□□□□□ -0.73
VRK1-204ENST00000555351 HS3ST6Q96QI5 342 aa10.49□□□□□ -0.73
VRK1-204ENST00000555351 SIKE1Q9BRV8 207 aa10.49□□□□□ -0.73
VRK1-204ENST00000555351 NAA11Q9BSU3 229 aaPredicted RBP10.49□□□□□ -0.73
VRK1-204ENST00000555351 RABEP2Q9H5N1 569 aa10.49□□□□□ -0.73
VRK1-204ENST00000555351 ESRP2Q9H6T0 727 aaKnown RBP10.49□□□□□ -0.73
VRK1-204ENST00000555351 SLCO1B3Q9NPD5 702 aa10.49□□□□□ -0.73
VRK1-204ENST00000555351 INTS9Q9NV88 658 aaKnown RBP10.49□□□□□ -0.73
VRK1-204ENST00000555351 PARPBPQ9NWS1 579 aa10.49□□□□□ -0.73
VRK1-204ENST00000555351 ZNF443Q9Y2A4 671 aaPredicted RBP10.49□□□□□ -0.73
VRK1-204ENST00000555351 AKAP6Q13023 2319 aa10.49□□□□□ -0.73
VRK1-204ENST00000555351 SMPD2O60906 423 aa10.48□□□□□ -0.73
VRK1-204ENST00000555351 PGM3O95394 542 aa10.48□□□□□ -0.73
VRK1-204ENST00000555351 H2AFXP16104 143 aaPredicted RBP10.48□□□□□ -0.73
VRK1-204ENST00000555351 CXCR1P25024 350 aa10.48□□□□□ -0.73
VRK1-204ENST00000555351 ACAA2P42765 397 aaKnown RBP10.48□□□□□ -0.73
VRK1-204ENST00000555351 AQP5P55064 265 aa10.48□□□□□ -0.73
VRK1-204ENST00000555351 COPZ1P61923 177 aa10.48□□□□□ -0.73
VRK1-204ENST00000555351 TAB1Q15750 504 aa10.48□□□□□ -0.73
VRK1-204ENST00000555351 TIMM23BQ5SRD1 257 aa10.48□□□□□ -0.73
VRK1-204ENST00000555351 NCMAPQ5T1S8 102 aa10.48□□□□□ -0.73
VRK1-204ENST00000555351 FBXW9Q5XUX1 488 aa10.48□□□□□ -0.73
VRK1-204ENST00000555351 ZNF836Q6ZNA1 936 aa10.48□□□□□ -0.73
VRK1-204ENST00000555351 ZNF704Q6ZNC4 412 aaPredicted RBP10.48□□□□□ -0.73
VRK1-204ENST00000555351 BHLHA15Q7RTS1 189 aaPredicted RBP10.48□□□□□ -0.73
VRK1-204ENST00000555351 FUNDC1Q8IVP5 155 aa10.48□□□□□ -0.73
VRK1-204ENST00000555351 ZNF100Q8IYN0 542 aa10.48□□□□□ -0.73
VRK1-204ENST00000555351 CKAP2Q8WWK9 683 aa10.48□□□□□ -0.73
VRK1-204ENST00000555351 SPDL1Q96EA4 605 aa10.48□□□□□ -0.73
VRK1-204ENST00000555351 PLPPR2Q96GM1 343 aa10.48□□□□□ -0.73
VRK1-204ENST00000555351 MAGEB18Q96M61 343 aa10.48□□□□□ -0.73
VRK1-204ENST00000555351 ZNF300Q96RE9 604 aaPredicted RBP10.48□□□□□ -0.73
VRK1-204ENST00000555351 CCL19Q99731 98 aa10.48□□□□□ -0.73
VRK1-204ENST00000555351 SF3B5Q9BWJ5 86 aaKnown RBP10.48□□□□□ -0.73
VRK1-204ENST00000555351 GSX2Q9BZM3 304 aa10.48□□□□□ -0.73
VRK1-204ENST00000555351 OR11A1Q9GZK7 315 aa10.48□□□□□ -0.73
VRK1-204ENST00000555351 EVA1AQ9H8M9 152 aa10.48□□□□□ -0.73
VRK1-204ENST00000555351 UBTD1Q9HAC8 227 aa10.48□□□□□ -0.73
VRK1-204ENST00000555351 SLC52A3Q9NQ40 469 aa10.48□□□□□ -0.73
VRK1-204ENST00000555351 MALT1Q9UDY8 824 aa10.48□□□□□ -0.73
VRK1-204ENST00000555351 CORO2BQ9UQ03 480 aa10.48□□□□□ -0.73
VRK1-204ENST00000555351 NOSIPQ9Y314 301 aaKnown RBP10.48□□□□□ -0.73
VRK1-204ENST00000555351 TRBV5-3A0A0A0MS03 114 aa10.47□□□□□ -0.73
VRK1-204ENST00000555351 A8MVM7 634 aa10.47□□□□□ -0.73
VRK1-204ENST00000555351 HS3ST1O14792 307 aa10.47□□□□□ -0.73
VRK1-204ENST00000555351 MRPL33O75394 65 aaKnown RBP10.47□□□□□ -0.73
VRK1-204ENST00000555351 VAMP5O95183 116 aa10.47□□□□□ -0.73
VRK1-204ENST00000555351 GPIP06744 558 aa10.47□□□□□ -0.73
VRK1-204ENST00000555351 IDUAP35475 653 aa10.47□□□□□ -0.73
VRK1-204ENST00000555351 OR2B6P58173 313 aa10.47□□□□□ -0.73
VRK1-204ENST00000555351 SQLEQ14534 574 aa10.47□□□□□ -0.73
VRK1-204ENST00000555351 GTDC1Q4AE62 458 aa10.47□□□□□ -0.73
VRK1-204ENST00000555351 OR7E24Q6IFN5 339 aa10.47□□□□□ -0.73
VRK1-204ENST00000555351 SLC2A7Q6PXP3 512 aa10.47□□□□□ -0.73
VRK1-204ENST00000555351 SEZ6L2Q6UXD5 910 aa10.47□□□□□ -0.73
VRK1-204ENST00000555351 HMGN2P46Q86SG4 172 aa10.47□□□□□ -0.73
VRK1-204ENST00000555351 VRK2Q86Y07 508 aa10.47□□□□□ -0.73
VRK1-204ENST00000555351 WFDC8Q8IUA0 241 aa10.47□□□□□ -0.73
VRK1-204ENST00000555351 KRTAP1-3Q8IUG1 177 aa10.47□□□□□ -0.73
VRK1-204ENST00000555351 TSPEARQ8WU66 669 aa10.47□□□□□ -0.73
VRK1-204ENST00000555351 TMEM45BQ96B21 275 aa10.47□□□□□ -0.73
VRK1-204ENST00000555351 APH1AQ96BI3 265 aa10.47□□□□□ -0.73
VRK1-204ENST00000555351 MUCL1Q96DR8 90 aa10.47□□□□□ -0.73
VRK1-204ENST00000555351 AURKBQ96GD4 344 aaPredicted RBP10.47□□□□□ -0.73
VRK1-204ENST00000555351 EBF4Q9BQW3 602 aa10.47□□□□□ -0.73
VRK1-204ENST00000555351 TMEM38AQ9H6F2 299 aa10.47□□□□□ -0.73
VRK1-204ENST00000555351 C12orf10Q9HB07 376 aa10.47□□□□□ -0.73
VRK1-204ENST00000555351 MRGBPQ9NV56 204 aa10.47□□□□□ -0.73
VRK1-204ENST00000555351 ZNF701Q9NV72 531 aaPredicted RBP10.47□□□□□ -0.73
VRK1-204ENST00000555351 RLIMQ9NVW2 624 aa10.47□□□□□ -0.73
VRK1-204ENST00000555351 SLC25A37Q9NYZ2 338 aa10.47□□□□□ -0.73
VRK1-204ENST00000555351 CCDC167Q9P0B6 97 aa10.47□□□□□ -0.73
VRK1-204ENST00000555351 PRSS50Q9UI38 385 aa10.47□□□□□ -0.73
VRK1-204ENST00000555351 SLC9A8Q9Y2E8 581 aa10.47□□□□□ -0.73
VRK1-204ENST00000555351 RNF115Q9Y4L5 304 aa10.47□□□□□ -0.73
VRK1-204ENST00000555351 A0A1W2PP18 115 aa10.46□□□□□ -0.73
VRK1-204ENST00000555351 TMEM72A0PK05 275 aa10.46□□□□□ -0.73
VRK1-204ENST00000555351 LIPT2A6NK58 231 aa10.46□□□□□ -0.73
VRK1-204ENST00000555351 OR5H1A6NKK0 313 aa10.46□□□□□ -0.73
VRK1-204ENST00000555351 C5orf58C9J3I9 102 aa10.46□□□□□ -0.73
VRK1-204ENST00000555351 CD3EP07766 207 aa10.46□□□□□ -0.73
VRK1-204ENST00000555351 ARAFP10398 606 aa10.46□□□□□ -0.73
VRK1-204ENST00000555351 IMPDH2P12268 514 aa10.46□□□□□ -0.73
VRK1-204ENST00000555351 GPX2P18283 190 aa10.46□□□□□ -0.73
VRK1-204ENST00000555351 GGT1P19440 569 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms