RNA–Protein interactions for RNA: ENST00000555252.5

MTHFD1-210, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 1 (best)

Gene MTHFD1, Length 2,053 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-210ENST00000555252 DRD5P21918 477 aa9.87□□□□□ -0.83
MTHFD1-210ENST00000555252 MAT2AP31153 395 aaKnown RBP9.87□□□□□ -0.83
MTHFD1-210ENST00000555252 TNFRSF4P43489 277 aa9.87□□□□□ -0.83
MTHFD1-210ENST00000555252 HOXA1P49639 335 aaPredicted RBP9.87□□□□□ -0.83
MTHFD1-210ENST00000555252 VEGFCP49767 419 aa9.87□□□□□ -0.83
MTHFD1-210ENST00000555252 PRKAG1P54619 331 aa9.87□□□□□ -0.83
MTHFD1-210ENST00000555252 GMFBP60983 142 aa9.87□□□□□ -0.83
MTHFD1-210ENST00000555252 MLLT1Q03111 559 aaPredicted RBP9.87□□□□□ -0.83
MTHFD1-210ENST00000555252 ILF3Q12906 894 aaKnown RBP eCLIP9.87□□□□□ -0.83
MTHFD1-210ENST00000555252 IL10RAQ13651 578 aa9.87□□□□□ -0.83
MTHFD1-210ENST00000555252 FGL2Q14314 439 aa9.87□□□□□ -0.83
MTHFD1-210ENST00000555252 LASP1Q14847 261 aaKnown RBP9.87□□□□□ -0.83
MTHFD1-210ENST00000555252 MPPED2Q15777 294 aa9.87□□□□□ -0.83
MTHFD1-210ENST00000555252 ZNF425Q6IV72 752 aa9.87□□□□□ -0.83
MTHFD1-210ENST00000555252 GSG1LQ6UXU4 331 aa9.87□□□□□ -0.83
MTHFD1-210ENST00000555252 TMUB2Q71RG4 321 aa9.87□□□□□ -0.83
MTHFD1-210ENST00000555252 NRROSQ86YC3 692 aa9.87□□□□□ -0.83
MTHFD1-210ENST00000555252 CDH26Q8IXH8 852 aa9.87□□□□□ -0.83
MTHFD1-210ENST00000555252 NRMQ8IXM6 262 aa9.87□□□□□ -0.83
MTHFD1-210ENST00000555252 CCDC116Q8IYX3 515 aa9.87□□□□□ -0.83
MTHFD1-210ENST00000555252 SAMD14Q8IZD0 417 aaPredicted RBP9.87□□□□□ -0.83
MTHFD1-210ENST00000555252 TMEM99Q8N816 258 aa9.87□□□□□ -0.83
MTHFD1-210ENST00000555252 DTX3Q8N9I9 347 aa9.87□□□□□ -0.83
MTHFD1-210ENST00000555252 NUP43Q8NFH3 380 aa9.87□□□□□ -0.83
MTHFD1-210ENST00000555252 GANCQ8TET4 914 aa9.87□□□□□ -0.83
MTHFD1-210ENST00000555252 THAP4Q8WY91 577 aa9.87□□□□□ -0.83
MTHFD1-210ENST00000555252 KISS1RQ969F8 398 aaPredicted RBP9.87□□□□□ -0.83
MTHFD1-210ENST00000555252 FAM131CQ96AQ9 280 aa9.87□□□□□ -0.83
MTHFD1-210ENST00000555252 SCARF2Q96GP6 870 aaPredicted RBP9.87□□□□□ -0.83
MTHFD1-210ENST00000555252 APOOQ9BUR5 198 aa9.87□□□□□ -0.83
MTHFD1-210ENST00000555252 SLC17A9Q9BYT1 436 aa9.87□□□□□ -0.83
MTHFD1-210ENST00000555252 IFT22Q9H7X7 185 aa9.87□□□□□ -0.83
MTHFD1-210ENST00000555252 FBRSQ9HAH7 460 aa9.87□□□□□ -0.83
MTHFD1-210ENST00000555252 CMC2Q9NRP2 79 aa9.87□□□□□ -0.83
MTHFD1-210ENST00000555252 ZMAT5Q9UDW3 170 aaKnown RBP9.87□□□□□ -0.83
MTHFD1-210ENST00000555252 ATG4BQ9Y4P1 393 aa9.87□□□□□ -0.83
MTHFD1-210ENST00000555252 TP53BP1Q12888 1972 aaPredicted RBP9.87□□□□□ -0.83
MTHFD1-210ENST00000555252 A0A1B0GVC2 190 aa9.87□□□□□ -0.83
MTHFD1-210ENST00000555252 ANKRD20A5PA0PJZ0 165 aa9.87□□□□□ -0.83
MTHFD1-210ENST00000555252 A6NIN4 97 aa9.87□□□□□ -0.83
MTHFD1-210ENST00000555252 DUXAA6NLW8 204 aa9.87□□□□□ -0.83
MTHFD1-210ENST00000555252 PLRG1O43660 514 aaKnown RBP9.87□□□□□ -0.83
MTHFD1-210ENST00000555252 SDC3O75056 442 aa9.87□□□□□ -0.83
MTHFD1-210ENST00000555252 RAB40ALP0C0E4 278 aa9.87□□□□□ -0.83
MTHFD1-210ENST00000555252 BMP7P18075 431 aa9.87□□□□□ -0.83
MTHFD1-210ENST00000555252 MAOBP27338 520 aa9.87□□□□□ -0.83
MTHFD1-210ENST00000555252 WASP42768 502 aa9.87□□□□□ -0.83
MTHFD1-210ENST00000555252 ERVK-21P61565 698 aa9.87□□□□□ -0.83
MTHFD1-210ENST00000555252 SCRN3Q0VDG4 424 aa9.87□□□□□ -0.83
MTHFD1-210ENST00000555252 PLBD1Q6P4A8 553 aa9.87□□□□□ -0.83
MTHFD1-210ENST00000555252 SYS1Q8N2H4 156 aa9.87□□□□□ -0.83
MTHFD1-210ENST00000555252 BMPERQ8N8U9 685 aa9.87□□□□□ -0.83
MTHFD1-210ENST00000555252 OR10H4Q8NGA5 316 aa9.87□□□□□ -0.83
MTHFD1-210ENST00000555252 OR6K3Q8NGY3 331 aa9.87□□□□□ -0.83
MTHFD1-210ENST00000555252 OR1S1Q8NH92 325 aa9.87□□□□□ -0.83
MTHFD1-210ENST00000555252 THEM6Q8WUY1 208 aa9.87□□□□□ -0.83
MTHFD1-210ENST00000555252 FCAMRQ8WWV6 532 aa9.87□□□□□ -0.83
MTHFD1-210ENST00000555252 RAB40AQ8WXH6 277 aa9.87□□□□□ -0.83
MTHFD1-210ENST00000555252 ASB12Q8WXK4 309 aa9.87□□□□□ -0.83
MTHFD1-210ENST00000555252 CNOT9Q92600 299 aaKnown RBP9.87□□□□□ -0.83
MTHFD1-210ENST00000555252 NSMAFQ92636 917 aa9.87□□□□□ -0.83
MTHFD1-210ENST00000555252 GAL3ST3Q96A11 431 aa9.87□□□□□ -0.83
MTHFD1-210ENST00000555252 CNRIP1Q96F85 164 aaPredicted RBP9.87□□□□□ -0.83
MTHFD1-210ENST00000555252 SLC41A3Q96GZ6 507 aa9.87□□□□□ -0.83
MTHFD1-210ENST00000555252 SAMD8Q96LT4 415 aa9.87□□□□□ -0.83
MTHFD1-210ENST00000555252 LRFN5Q96NI6 719 aa9.87□□□□□ -0.83
MTHFD1-210ENST00000555252 OR7D2Q96RA2 312 aa9.87□□□□□ -0.83
MTHFD1-210ENST00000555252 CDCA3Q99618 268 aaPredicted RBP9.87□□□□□ -0.83
MTHFD1-210ENST00000555252 NPAS1Q99742 590 aa9.87□□□□□ -0.83
MTHFD1-210ENST00000555252 LMAN2LQ9H0V9 348 aa9.87□□□□□ -0.83
MTHFD1-210ENST00000555252 SLC38A1Q9H2H9 487 aa9.87□□□□□ -0.83
MTHFD1-210ENST00000555252 CACYBPQ9HB71 228 aaKnown RBP9.87□□□□□ -0.83
MTHFD1-210ENST00000555252 NOX3Q9HBY0 568 aa9.87□□□□□ -0.83
MTHFD1-210ENST00000555252 ZDHHC4Q9NPG8 344 aa9.87□□□□□ -0.83
MTHFD1-210ENST00000555252 PRDM9Q9NQV7 894 aa9.87□□□□□ -0.83
MTHFD1-210ENST00000555252 SLC39A1Q9NY26 324 aa9.87□□□□□ -0.83
MTHFD1-210ENST00000555252 ZMIZ1Q9ULJ6 1067 aa9.87□□□□□ -0.83
MTHFD1-210ENST00000555252 COPS3Q9UNS2 423 aa9.87□□□□□ -0.83
MTHFD1-210ENST00000555252 RCE1Q9Y256 329 aa9.87□□□□□ -0.83
MTHFD1-210ENST00000555252 A0A1W2PQU0 124 aa9.86□□□□□ -0.83
MTHFD1-210ENST00000555252 UBE2QL1A1L167 161 aa9.86□□□□□ -0.83
MTHFD1-210ENST00000555252 UNC119BA6NIH7 251 aa9.86□□□□□ -0.83
MTHFD1-210ENST00000555252 ZNF879B4DU55 563 aa9.86□□□□□ -0.83
MTHFD1-210ENST00000555252 DNASE2O00115 360 aaPredicted RBP9.86□□□□□ -0.83
MTHFD1-210ENST00000555252 BHLHE40O14503 412 aa9.86□□□□□ -0.83
MTHFD1-210ENST00000555252 ARPC1BO15143 372 aaKnown RBP9.86□□□□□ -0.83
MTHFD1-210ENST00000555252 PPM1DO15297 605 aa9.86□□□□□ -0.83
MTHFD1-210ENST00000555252 GMDSO60547 372 aa9.86□□□□□ -0.83
MTHFD1-210ENST00000555252 RNGTTO60942 597 aaKnown RBP9.86□□□□□ -0.83
MTHFD1-210ENST00000555252 NDUFB6O95139 128 aa9.86□□□□□ -0.83
MTHFD1-210ENST00000555252 RCBTB2O95199 551 aa9.86□□□□□ -0.83
MTHFD1-210ENST00000555252 HPP00738 406 aa9.86□□□□□ -0.83
MTHFD1-210ENST00000555252 SBK2P0C263 348 aa9.86□□□□□ -0.83
MTHFD1-210ENST00000555252 SNRPBP14678 240 aaKnown RBP9.86□□□□□ -0.83
MTHFD1-210ENST00000555252 GPR4P46093 362 aa9.86□□□□□ -0.83
MTHFD1-210ENST00000555252 RGS8P57771 180 aaPredicted RBP9.86□□□□□ -0.83
MTHFD1-210ENST00000555252 RPS15AP62244 130 aaKnown RBP9.86□□□□□ -0.83
MTHFD1-210ENST00000555252 ACTA2P62736 377 aa9.86□□□□□ -0.83
MTHFD1-210ENST00000555252 ACTG2P63267 376 aa9.86□□□□□ -0.83
MTHFD1-210ENST00000555252 SLC3A1Q07837 685 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms