RNA–Protein interactions for RNA: ENST00000554975.5

SHMT2-216, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-216ENST00000554975 MGLLQ99685 303 aa10.18□□□□□ -0.78
SHMT2-216ENST00000554975 RHNO1Q9BSD3 238 aa10.18□□□□□ -0.78
SHMT2-216ENST00000554975 MROQ9BYG7 248 aa10.18□□□□□ -0.78
SHMT2-216ENST00000554975 SLIRPQ9GZT3 109 aaKnown RBP10.18□□□□□ -0.78
SHMT2-216ENST00000554975 PIGUQ9H490 435 aa10.18□□□□□ -0.78
SHMT2-216ENST00000554975 MTHFD2LQ9H903 347 aaPredicted RBP10.18□□□□□ -0.78
SHMT2-216ENST00000554975 ZNF304Q9HCX3 659 aa10.18□□□□□ -0.78
SHMT2-216ENST00000554975 ISYNA1Q9NPH2 558 aa10.18□□□□□ -0.78
SHMT2-216ENST00000554975 ABI3Q9P2A4 366 aa10.18□□□□□ -0.78
SHMT2-216ENST00000554975 TESQ9UGI8 421 aaKnown RBP10.18□□□□□ -0.78
SHMT2-216ENST00000554975 DAPK2Q9UIK4 370 aa10.18□□□□□ -0.78
SHMT2-216ENST00000554975 DIMT1Q9UNQ2 313 aaKnown RBP10.18□□□□□ -0.78
SHMT2-216ENST00000554975 MRPS33Q9Y291 106 aaKnown RBP10.18□□□□□ -0.78
SHMT2-216ENST00000554975 ZNF443Q9Y2A4 671 aaPredicted RBP10.18□□□□□ -0.78
SHMT2-216ENST00000554975 SLC22A7Q9Y694 548 aa10.18□□□□□ -0.78
SHMT2-216ENST00000554975 PRAMEF27A3QJZ7 478 aa10.17□□□□□ -0.78
SHMT2-216ENST00000554975 FITM1A5D6W6 292 aa10.17□□□□□ -0.78
SHMT2-216ENST00000554975 GLOD5A6NK44 160 aa10.17□□□□□ -0.78
SHMT2-216ENST00000554975 M0R082 166 aa10.17□□□□□ -0.78
SHMT2-216ENST00000554975 PGRMC2O15173 223 aa10.17□□□□□ -0.78
SHMT2-216ENST00000554975 CYP7B1O75881 506 aa10.17□□□□□ -0.78
SHMT2-216ENST00000554975 SULT1C4O75897 302 aa10.17□□□□□ -0.78
SHMT2-216ENST00000554975 SOX14O95416 240 aa10.17□□□□□ -0.78
SHMT2-216ENST00000554975 ATP1B1P05026 303 aa10.17□□□□□ -0.78
SHMT2-216ENST00000554975 HMGN1P05114 100 aa10.17□□□□□ -0.78
SHMT2-216ENST00000554975 SCG5P05408 212 aa10.17□□□□□ -0.78
SHMT2-216ENST00000554975 GADD45AP24522 165 aa10.17□□□□□ -0.78
SHMT2-216ENST00000554975 PSMA1P25786 263 aaKnown RBP10.17□□□□□ -0.78
SHMT2-216ENST00000554975 IDUAP35475 653 aa10.17□□□□□ -0.78
SHMT2-216ENST00000554975 CAPZA2P47755 286 aa10.17□□□□□ -0.78
SHMT2-216ENST00000554975 MAN2A2P49641 1150 aa10.17□□□□□ -0.78
SHMT2-216ENST00000554975 PPP5CP53041 499 aa10.17□□□□□ -0.78
SHMT2-216ENST00000554975 RAB38P57729 211 aa10.17□□□□□ -0.78
SHMT2-216ENST00000554975 PRKCDQ05655 676 aa10.17□□□□□ -0.78
SHMT2-216ENST00000554975 RAB40BQ12829 278 aa10.17□□□□□ -0.78
SHMT2-216ENST00000554975 DUSP8Q13202 625 aa10.17□□□□□ -0.78
SHMT2-216ENST00000554975 MED22Q15528 200 aa10.17□□□□□ -0.78
SHMT2-216ENST00000554975 ZNF181Q2M3W8 571 aa10.17□□□□□ -0.78
SHMT2-216ENST00000554975 FAM180BQ6P0A1 224 aa10.17□□□□□ -0.78
SHMT2-216ENST00000554975 OVCH1Q7RTY7 1134 aa10.17□□□□□ -0.78
SHMT2-216ENST00000554975 TGIF2LYQ8IUE0 185 aa10.17□□□□□ -0.78
SHMT2-216ENST00000554975 ZNF619Q8N2I2 560 aa10.17□□□□□ -0.78
SHMT2-216ENST00000554975 CENPSQ8N2Z9 138 aa10.17□□□□□ -0.78
SHMT2-216ENST00000554975 MFSD4AQ8N468 514 aa10.17□□□□□ -0.78
SHMT2-216ENST00000554975 C7orf57Q8NEG2 295 aa10.17□□□□□ -0.78
SHMT2-216ENST00000554975 OR6T1Q8NGN1 323 aa10.17□□□□□ -0.78
SHMT2-216ENST00000554975 ZCCHC10Q8TBK6 192 aa10.17□□□□□ -0.78
SHMT2-216ENST00000554975 TMEM163Q8TC26 289 aa10.17□□□□□ -0.78
SHMT2-216ENST00000554975 BRIX1Q8TDN6 353 aaKnown RBP10.17□□□□□ -0.78
SHMT2-216ENST00000554975 OIT3Q8WWZ8 545 aa10.17□□□□□ -0.78
SHMT2-216ENST00000554975 SLC35B4Q969S0 331 aa10.17□□□□□ -0.78
SHMT2-216ENST00000554975 ITPKCQ96DU7 683 aa10.17□□□□□ -0.78
SHMT2-216ENST00000554975 COQ7Q99807 217 aa10.17□□□□□ -0.78
SHMT2-216ENST00000554975 TSSK6Q9BXA6 273 aa10.17□□□□□ -0.78
SHMT2-216ENST00000554975 NXF2Q9GZY0 626 aaKnown RBP10.17□□□□□ -0.78
SHMT2-216ENST00000554975 ZNF160Q9HCG1 818 aa10.17□□□□□ -0.78
SHMT2-216ENST00000554975 EQTNQ9NQ60 294 aa10.17□□□□□ -0.78
SHMT2-216ENST00000554975 MRPS18AQ9NVS2 196 aaKnown RBP10.17□□□□□ -0.78
SHMT2-216ENST00000554975 CTSFQ9UBX1 484 aa10.17□□□□□ -0.78
SHMT2-216ENST00000554975 AASSQ9UDR5 926 aa10.17□□□□□ -0.78
SHMT2-216ENST00000554975 C19orf53Q9UNZ5 99 aaPredicted RBP10.17□□□□□ -0.78
SHMT2-216ENST00000554975 HRNRQ86YZ3 2850 aaPredicted RBP10.17□□□□□ -0.78
SHMT2-216ENST00000554975 hCG_2014768A0A024R1R8 64 aa10.16□□□□□ -0.78
SHMT2-216ENST00000554975 A0A075B6Q4 140 aa10.16□□□□□ -0.78
SHMT2-216ENST00000554975 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.16□□□□□ -0.78
SHMT2-216ENST00000554975 TRAV17A0A0B4J275 112 aa10.16□□□□□ -0.78
SHMT2-216ENST00000554975 TMEM129A0AVI4 362 aa10.16□□□□□ -0.78
SHMT2-216ENST00000554975 J3QRK9 145 aa10.16□□□□□ -0.78
SHMT2-216ENST00000554975 P2RX6O15547 441 aa10.16□□□□□ -0.78
SHMT2-216ENST00000554975 CHST10O43529 356 aa10.16□□□□□ -0.78
SHMT2-216ENST00000554975 PLOD3O60568 738 aa10.16□□□□□ -0.78
SHMT2-216ENST00000554975 ENTPD6O75354 484 aa10.16□□□□□ -0.78
SHMT2-216ENST00000554975 STX11O75558 287 aa10.16□□□□□ -0.78
SHMT2-216ENST00000554975 PRKRAO75569 313 aaKnown RBP10.16□□□□□ -0.78
SHMT2-216ENST00000554975 CELA2AP08217 269 aa10.16□□□□□ -0.78
SHMT2-216ENST00000554975 ACP2P11117 423 aa10.16□□□□□ -0.78
SHMT2-216ENST00000554975 KLK2P20151 261 aa10.16□□□□□ -0.78
SHMT2-216ENST00000554975 NR4A1P22736 598 aa10.16□□□□□ -0.78
SHMT2-216ENST00000554975 DEFA1P59665 94 aa10.16□□□□□ -0.78
SHMT2-216ENST00000554975 DEFA3P59666 94 aa10.16□□□□□ -0.78
SHMT2-216ENST00000554975 LSM3P62310 102 aaKnown RBP10.16□□□□□ -0.78
SHMT2-216ENST00000554975 CDK5Q00535 292 aa10.16□□□□□ -0.78
SHMT2-216ENST00000554975 PIN1Q13526 163 aaPredicted RBP10.16□□□□□ -0.78
SHMT2-216ENST00000554975 SPHARQ15513 63 aa10.16□□□□□ -0.78
SHMT2-216ENST00000554975 ZNHIT3Q15649 155 aaPredicted RBP10.16□□□□□ -0.78
SHMT2-216ENST00000554975 TSTQ16762 297 aaKnown RBP10.16□□□□□ -0.78
SHMT2-216ENST00000554975 PRTGQ2VWP7 1150 aa10.16□□□□□ -0.78
SHMT2-216ENST00000554975 FRRS1Q6ZNA5 592 aa10.16□□□□□ -0.78
SHMT2-216ENST00000554975 GID4Q8IVV7 300 aa10.16□□□□□ -0.78
SHMT2-216ENST00000554975 RNF113BQ8IZP6 322 aaKnown RBP10.16□□□□□ -0.78
SHMT2-216ENST00000554975 SIRT6Q8N6T7 355 aa10.16□□□□□ -0.78
SHMT2-216ENST00000554975 TCEANCQ8N8B7 351 aa10.16□□□□□ -0.78
SHMT2-216ENST00000554975 COX18Q8N8Q8 333 aa10.16□□□□□ -0.78
SHMT2-216ENST00000554975 OR52L1Q8NGH7 329 aa10.16□□□□□ -0.78
SHMT2-216ENST00000554975 OR4D11Q8NGI4 311 aa10.16□□□□□ -0.78
SHMT2-216ENST00000554975 UBE2FQ969M7 185 aa10.16□□□□□ -0.78
SHMT2-216ENST00000554975 NACC2Q96BF6 587 aa10.16□□□□□ -0.78
SHMT2-216ENST00000554975 C8orf44Q96CB5 159 aa10.16□□□□□ -0.78
SHMT2-216ENST00000554975 MMABQ96EY8 250 aaPredicted RBP10.16□□□□□ -0.78
SHMT2-216ENST00000554975 GIMAP5Q96F15 307 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms