RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 SULT2B1O00204 365 aa11.01□□□□□ -0.65
SYNE2-214ENST00000554928 SYT5O00445 386 aa11.01□□□□□ -0.65
SYNE2-214ENST00000554928 SERPINB7O75635 380 aa11.01□□□□□ -0.65
SYNE2-214ENST00000554928 LGI1O95970 557 aa11.01□□□□□ -0.65
SYNE2-214ENST00000554928 THY1P04216 161 aa11.01□□□□□ -0.65
SYNE2-214ENST00000554928 COX6B1P14854 86 aa11.01□□□□□ -0.65
SYNE2-214ENST00000554928 PRDX6P30041 224 aa11.01□□□□□ -0.65
SYNE2-214ENST00000554928 AGTR1P30556 359 aa11.01□□□□□ -0.65
SYNE2-214ENST00000554928 GSK3BP49841 420 aa11.01□□□□□ -0.65
SYNE2-214ENST00000554928 RGS8P57771 180 aaPredicted RBP11.01□□□□□ -0.65
SYNE2-214ENST00000554928 OR2B6P58173 313 aa11.01□□□□□ -0.65
SYNE2-214ENST00000554928 RAC3P60763 192 aa11.01□□□□□ -0.65
SYNE2-214ENST00000554928 PSME3P61289 254 aa11.01□□□□□ -0.65
SYNE2-214ENST00000554928 EGR4Q05215 589 aa11.01□□□□□ -0.65
SYNE2-214ENST00000554928 NRF1Q16656 503 aa11.01□□□□□ -0.65
SYNE2-214ENST00000554928 ZSWIM7Q19AV6 140 aa11.01□□□□□ -0.65
SYNE2-214ENST00000554928 FBXL19-AS1Q494R0 122 aa11.01□□□□□ -0.65
SYNE2-214ENST00000554928 OR2A2Q6IF42 318 aa11.01□□□□□ -0.65
SYNE2-214ENST00000554928 HACD2Q6Y1H2 254 aa11.01□□□□□ -0.65
SYNE2-214ENST00000554928 FAM214BQ7L5A3 538 aa11.01□□□□□ -0.65
SYNE2-214ENST00000554928 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.01□□□□□ -0.65
SYNE2-214ENST00000554928 CCDC103Q8IW40 242 aa11.01□□□□□ -0.65
SYNE2-214ENST00000554928 TUSC5Q8IXB3 177 aa11.01□□□□□ -0.65
SYNE2-214ENST00000554928 DMRTC2Q8IXT2 367 aaPredicted RBP11.01□□□□□ -0.65
SYNE2-214ENST00000554928 MICU2Q8IYU8 434 aa11.01□□□□□ -0.65
SYNE2-214ENST00000554928 FITM2Q8N6M3 262 aa11.01□□□□□ -0.65
SYNE2-214ENST00000554928 ZNF610Q8N9Z0 462 aa11.01□□□□□ -0.65
SYNE2-214ENST00000554928 OR2T12Q8NG77 320 aa11.01□□□□□ -0.65
SYNE2-214ENST00000554928 OR6T1Q8NGN1 323 aa11.01□□□□□ -0.65
SYNE2-214ENST00000554928 SLC25A43Q8WUT9 341 aaPredicted RBP11.01□□□□□ -0.65
SYNE2-214ENST00000554928 RNASE6Q93091 150 aaKnown RBP11.01□□□□□ -0.65
SYNE2-214ENST00000554928 SH3GL1Q99961 368 aa11.01□□□□□ -0.65
SYNE2-214ENST00000554928 SPOCK3Q9BQ16 436 aa11.01□□□□□ -0.65
SYNE2-214ENST00000554928 RBM24Q9BX46 236 aaKnown RBP11.01□□□□□ -0.65
SYNE2-214ENST00000554928 C12orf49Q9H741 205 aa11.01□□□□□ -0.65
SYNE2-214ENST00000554928 EFCAB1Q9HAE3 211 aa11.01□□□□□ -0.65
SYNE2-214ENST00000554928 PAQR5Q9NXK6 330 aaPredicted RBP11.01□□□□□ -0.65
SYNE2-214ENST00000554928 GALNT8Q9NY28 637 aa11.01□□□□□ -0.65
SYNE2-214ENST00000554928 KLHL13Q9P2N7 655 aa11.01□□□□□ -0.65
SYNE2-214ENST00000554928 PKDREJQ9NTG1 2253 aa11□□□□□ -0.65
SYNE2-214ENST00000554928 PRORSD1PA6NEY8 169 aa11□□□□□ -0.65
SYNE2-214ENST00000554928 ZNF208O43345 1280 aa11□□□□□ -0.65
SYNE2-214ENST00000554928 HNRNPRO43390 633 aaKnown RBP11□□□□□ -0.65
SYNE2-214ENST00000554928 NPIPB7O75200 414 aa11□□□□□ -0.65
SYNE2-214ENST00000554928 LYPD3O95274 346 aa11□□□□□ -0.65
SYNE2-214ENST00000554928 PMS2P2O95744 297 aa11□□□□□ -0.65
SYNE2-214ENST00000554928 FAM107AO95990 144 aa11□□□□□ -0.65
SYNE2-214ENST00000554928 CRHP06850 196 aa11□□□□□ -0.65
SYNE2-214ENST00000554928 FCGR2AP12318 317 aa11□□□□□ -0.65
SYNE2-214ENST00000554928 UQCRBP14927 111 aa11□□□□□ -0.65
SYNE2-214ENST00000554928 NCK1P16333 377 aa11□□□□□ -0.65
SYNE2-214ENST00000554928 FPR1P21462 350 aa11□□□□□ -0.65
SYNE2-214ENST00000554928 FUT4P22083 530 aa11□□□□□ -0.65
SYNE2-214ENST00000554928 CXCR1P25024 350 aa11□□□□□ -0.65
SYNE2-214ENST00000554928 CCKARP32238 428 aa11□□□□□ -0.65
SYNE2-214ENST00000554928 NTF4P34130 210 aa11□□□□□ -0.65
SYNE2-214ENST00000554928 CPOXP36551 454 aa11□□□□□ -0.65
SYNE2-214ENST00000554928 HTR3AP46098 478 aa11□□□□□ -0.65
SYNE2-214ENST00000554928 COPZ1P61923 177 aa11□□□□□ -0.65
SYNE2-214ENST00000554928 FAM27E3Q08E93 113 aa11□□□□□ -0.65
SYNE2-214ENST00000554928 CEACAM7Q14002 265 aa11□□□□□ -0.65
SYNE2-214ENST00000554928 OR1Q1Q15612 314 aa11□□□□□ -0.65
SYNE2-214ENST00000554928 LRRC23Q53EV4 343 aaPredicted RBP11□□□□□ -0.65
SYNE2-214ENST00000554928 ABLIM2Q6H8Q1 611 aa11□□□□□ -0.65
SYNE2-214ENST00000554928 PATL1Q86TB9 770 aaKnown RBP11□□□□□ -0.65
SYNE2-214ENST00000554928 RNF148Q8N7C7 305 aa11□□□□□ -0.65
SYNE2-214ENST00000554928 ANKS4BQ8N8V4 417 aa11□□□□□ -0.65
SYNE2-214ENST00000554928 OR52E4Q8NGH9 312 aa11□□□□□ -0.65
SYNE2-214ENST00000554928 SLC35B4Q969S0 331 aa11□□□□□ -0.65
SYNE2-214ENST00000554928 CMTM5Q96DZ9 223 aa11□□□□□ -0.65
SYNE2-214ENST00000554928 GMPPAQ96IJ6 420 aaPredicted RBP11□□□□□ -0.65
SYNE2-214ENST00000554928 PSD2Q9BQI7 771 aa11□□□□□ -0.65
SYNE2-214ENST00000554928 PTDSS2Q9BVG9 487 aa11□□□□□ -0.65
SYNE2-214ENST00000554928 ARMC7Q9H6L4 198 aa11□□□□□ -0.65
SYNE2-214ENST00000554928 ABCD2Q9UBJ2 740 aa11□□□□□ -0.65
SYNE2-214ENST00000554928 SEC14L4Q9UDX3 406 aa11□□□□□ -0.65
SYNE2-214ENST00000554928 HDGFL3Q9Y3E1 203 aa11□□□□□ -0.65
SYNE2-214ENST00000554928 SPIN1Q9Y657 262 aaPredicted RBP11□□□□□ -0.65
SYNE2-214ENST00000554928 A0A0B4J2E0 115 aa10.99□□□□□ -0.65
SYNE2-214ENST00000554928 A0A1B0GX12 115 aa10.99□□□□□ -0.65
SYNE2-214ENST00000554928 ELOVL7A1L3X0 281 aa10.99□□□□□ -0.65
SYNE2-214ENST00000554928 LIPT2A6NK58 231 aa10.99□□□□□ -0.65
SYNE2-214ENST00000554928 CPSF4LA6NMK7 179 aaKnown RBP10.99□□□□□ -0.65
SYNE2-214ENST00000554928 ZNF716A6NP11 495 aa10.99□□□□□ -0.65
SYNE2-214ENST00000554928 CYTIPO60759 359 aa10.99□□□□□ -0.65
SYNE2-214ENST00000554928 PLGP00747 810 aaPredicted RBP10.99□□□□□ -0.65
SYNE2-214ENST00000554928 KDELR2P33947 212 aa10.99□□□□□ -0.65
SYNE2-214ENST00000554928 CDH12P55289 794 aa10.99□□□□□ -0.65
SYNE2-214ENST00000554928 KRTAP10-9P60411 292 aa10.99□□□□□ -0.65
SYNE2-214ENST00000554928 SLC25A3Q00325 362 aa10.99□□□□□ -0.65
SYNE2-214ENST00000554928 VEZF1Q14119 521 aa10.99□□□□□ -0.65
SYNE2-214ENST00000554928 OR7A5Q15622 319 aa10.99□□□□□ -0.65
SYNE2-214ENST00000554928 CYBRD1Q53TN4 286 aa10.99□□□□□ -0.65
SYNE2-214ENST00000554928 INTS11Q5TA45 600 aaKnown RBP10.99□□□□□ -0.65
SYNE2-214ENST00000554928 FAM91A1Q658Y4 838 aa10.99□□□□□ -0.65
SYNE2-214ENST00000554928 ERICH5Q6P6B1 374 aa10.99□□□□□ -0.65
SYNE2-214ENST00000554928 C6orf89Q6UWU4 347 aa10.99□□□□□ -0.65
SYNE2-214ENST00000554928 THSD4Q6ZMP0 1018 aa10.99□□□□□ -0.65
SYNE2-214ENST00000554928 WDR88Q6ZMY6 472 aa10.99□□□□□ -0.65
SYNE2-214ENST00000554928 C22orf34Q6ZV56 151 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms