RNA–Protein interactions for RNA: ENST00000554731.1

RDH11-207, Transcript of retinol dehydrogenase 11, humanhuman

TSL 3

Gene RDH11, Length 888 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-207ENST00000554731 PARPBPQ9NWS1 579 aa10.95□□□□□ -0.66
RDH11-207ENST00000554731 ASIC5Q9NY37 505 aa10.95□□□□□ -0.66
RDH11-207ENST00000554731 NOP53Q9NZM5 478 aaKnown RBP10.95□□□□□ -0.66
RDH11-207ENST00000554731 TMEM181Q9P2C4 612 aa10.95□□□□□ -0.66
RDH11-207ENST00000554731 UPB1Q9UBR1 384 aa10.95□□□□□ -0.66
RDH11-207ENST00000554731 DCTN4Q9UJW0 460 aa10.95□□□□□ -0.66
RDH11-207ENST00000554731 TRAPPC4Q9Y296 219 aa10.95□□□□□ -0.66
RDH11-207ENST00000554731 SLC9A8Q9Y2E8 581 aa10.95□□□□□ -0.66
RDH11-207ENST00000554731 AMDHD2Q9Y303 409 aa10.95□□□□□ -0.66
RDH11-207ENST00000554731 ATP23Q9Y6H3 246 aa10.95□□□□□ -0.66
RDH11-207ENST00000554731 NBEAL1Q6ZS30 2694 aa10.95□□□□□ -0.66
RDH11-207ENST00000554731 PDLIM1O00151 329 aa10.94□□□□□ -0.66
RDH11-207ENST00000554731 LMX1BO60663 402 aa10.94□□□□□ -0.66
RDH11-207ENST00000554731 EIF1BO60739 113 aaKnown RBP10.94□□□□□ -0.66
RDH11-207ENST00000554731 BCAS1O75363 584 aaPredicted RBP10.94□□□□□ -0.66
RDH11-207ENST00000554731 SPAG7O75391 227 aa10.94□□□□□ -0.66
RDH11-207ENST00000554731 IGHV4-31P0DP07 118 aa10.94□□□□□ -0.66
RDH11-207ENST00000554731 ZNF16P17020 682 aaPredicted RBP10.94□□□□□ -0.66
RDH11-207ENST00000554731 CCNA2P20248 432 aa10.94□□□□□ -0.66
RDH11-207ENST00000554731 APOBEC3AP31941 199 aaPredicted RBP10.94□□□□□ -0.66
RDH11-207ENST00000554731 ARRB2P32121 409 aa10.94□□□□□ -0.66
RDH11-207ENST00000554731 HTR3AP46098 478 aa10.94□□□□□ -0.66
RDH11-207ENST00000554731 SLC35A1P78382 337 aa10.94□□□□□ -0.66
RDH11-207ENST00000554731 KCNJ10P78508 379 aa10.94□□□□□ -0.66
RDH11-207ENST00000554731 LSM11P83369 360 aaKnown RBP eCLIP10.94□□□□□ -0.66
RDH11-207ENST00000554731 SMU1Q2TAY7 513 aa10.94□□□□□ -0.66
RDH11-207ENST00000554731 C1QTNF12Q5T7M4 302 aa10.94□□□□□ -0.66
RDH11-207ENST00000554731 C9orf135Q5VTT2 229 aa10.94□□□□□ -0.66
RDH11-207ENST00000554731 EMBQ6PCB8 327 aa10.94□□□□□ -0.66
RDH11-207ENST00000554731 RIBC1Q8N443 379 aaPredicted RBP10.94□□□□□ -0.66
RDH11-207ENST00000554731 C1orf162Q8NEQ5 155 aaPredicted RBP10.94□□□□□ -0.66
RDH11-207ENST00000554731 OR8J2Q8NGG1 315 aa10.94□□□□□ -0.66
RDH11-207ENST00000554731 RAB8BQ92930 207 aa10.94□□□□□ -0.66
RDH11-207ENST00000554731 SAP130Q9H0E3 1048 aa10.94□□□□□ -0.66
RDH11-207ENST00000554731 EXOSC3Q9NQT5 275 aaKnown RBP10.94□□□□□ -0.66
RDH11-207ENST00000554731 SLC17A5Q9NRA2 495 aa10.94□□□□□ -0.66
RDH11-207ENST00000554731 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.94□□□□□ -0.66
RDH11-207ENST00000554731 YLPM1P49750 1951 aaKnown RBP10.94□□□□□ -0.66
RDH11-207ENST00000554731 TMED7-TICAM2A0A0A6YYA0 188 aa10.93□□□□□ -0.66
RDH11-207ENST00000554731 CPSF4O95639 269 aaKnown RBP10.93□□□□□ -0.66
RDH11-207ENST00000554731 UQCRC2P22695 453 aa10.93□□□□□ -0.66
RDH11-207ENST00000554731 THBS2P35442 1172 aa10.93□□□□□ -0.66
RDH11-207ENST00000554731 IDH2P48735 452 aaKnown RBP10.93□□□□□ -0.66
RDH11-207ENST00000554731 GZMKP49863 264 aa10.93□□□□□ -0.66
RDH11-207ENST00000554731 KHKP50053 298 aa10.93□□□□□ -0.66
RDH11-207ENST00000554731 PHC1P78364 1004 aa10.93□□□□□ -0.66
RDH11-207ENST00000554731 HPCAP84074 193 aa10.93□□□□□ -0.66
RDH11-207ENST00000554731 H3F3AP84243 136 aa10.93□□□□□ -0.66
RDH11-207ENST00000554731 KRTAP24-1Q3LI83 254 aa10.93□□□□□ -0.66
RDH11-207ENST00000554731 ANXA8L1Q5VT79 327 aa10.93□□□□□ -0.66
RDH11-207ENST00000554731 AP1ARQ63HQ0 302 aa10.93□□□□□ -0.66
RDH11-207ENST00000554731 KLHL24Q6TFL4 600 aa10.93□□□□□ -0.66
RDH11-207ENST00000554731 FRRS1Q6ZNA5 592 aa10.93□□□□□ -0.66
RDH11-207ENST00000554731 VPS37AQ8NEZ2 397 aa10.93□□□□□ -0.66
RDH11-207ENST00000554731 TCP10LQ8TDR4 215 aa10.93□□□□□ -0.66
RDH11-207ENST00000554731 PMM1Q92871 262 aa10.93□□□□□ -0.66
RDH11-207ENST00000554731 ROPN1LQ96C74 230 aa10.93□□□□□ -0.66
RDH11-207ENST00000554731 DDIT4LQ96D03 193 aa10.93□□□□□ -0.66
RDH11-207ENST00000554731 ZG16BQ96DA0 208 aa10.93□□□□□ -0.66
RDH11-207ENST00000554731 ZIM3Q96PE6 472 aa10.93□□□□□ -0.66
RDH11-207ENST00000554731 NAA11Q9BSU3 229 aaPredicted RBP10.93□□□□□ -0.66
RDH11-207ENST00000554731 DPY30Q9C005 99 aa10.93□□□□□ -0.66
RDH11-207ENST00000554731 SLC7A10Q9NS82 523 aa10.93□□□□□ -0.66
RDH11-207ENST00000554731 TMED7Q9Y3B3 224 aa10.93□□□□□ -0.66
RDH11-207ENST00000554731 FLVCR1Q9Y5Y0 555 aa10.93□□□□□ -0.66
RDH11-207ENST00000554731 FKBP7Q9Y680 259 aa10.93□□□□□ -0.66
RDH11-207ENST00000554731 CUBNO60494 3623 aa10.93□□□□□ -0.66
RDH11-207ENST00000554731 MALRD1Q5VYJ5 2156 aa10.93□□□□□ -0.66
RDH11-207ENST00000554731 ARFGEF3Q5TH69 2177 aa10.92□□□□□ -0.66
RDH11-207ENST00000554731 PRSS51A0A1B0GVH4 220 aa10.92□□□□□ -0.66
RDH11-207ENST00000554731 CLDN24A6NM45 220 aa10.92□□□□□ -0.66
RDH11-207ENST00000554731 ATP6V1G2-DDX39BF2Z307 99 aa10.92□□□□□ -0.66
RDH11-207ENST00000554731 ZNF208O43345 1280 aa10.92□□□□□ -0.66
RDH11-207ENST00000554731 LY6HO94772 140 aa10.92□□□□□ -0.66
RDH11-207ENST00000554731 WNT11O96014 354 aa10.92□□□□□ -0.66
RDH11-207ENST00000554731 BPGMP07738 259 aa10.92□□□□□ -0.66
RDH11-207ENST00000554731 NUDT17P0C025 328 aa10.92□□□□□ -0.66
RDH11-207ENST00000554731 SRD5A1P18405 259 aa10.92□□□□□ -0.66
RDH11-207ENST00000554731 MPGP29372 298 aa10.92□□□□□ -0.66
RDH11-207ENST00000554731 CHI3L1P36222 383 aaPredicted RBP10.92□□□□□ -0.66
RDH11-207ENST00000554731 PDLIM4P50479 330 aa10.92□□□□□ -0.66
RDH11-207ENST00000554731 POLR2HP52434 150 aaKnown RBP10.92□□□□□ -0.66
RDH11-207ENST00000554731 PRPS1P60891 318 aa10.92□□□□□ -0.66
RDH11-207ENST00000554731 SLC25A3Q00325 362 aa10.92□□□□□ -0.66
RDH11-207ENST00000554731 FUT5Q11128 374 aa10.92□□□□□ -0.66
RDH11-207ENST00000554731 SLC17A1Q14916 467 aa10.92□□□□□ -0.66
RDH11-207ENST00000554731 GPAT3Q53EU6 434 aa10.92□□□□□ -0.66
RDH11-207ENST00000554731 TSPO2Q5TGU0 170 aa10.92□□□□□ -0.66
RDH11-207ENST00000554731 SAXO2Q658L1 398 aa10.92□□□□□ -0.66
RDH11-207ENST00000554731 FAM166AQ6J272 317 aa10.92□□□□□ -0.66
RDH11-207ENST00000554731 HMGN2P46Q86SG4 172 aa10.92□□□□□ -0.66
RDH11-207ENST00000554731 ANKRD46Q86W74 232 aa10.92□□□□□ -0.66
RDH11-207ENST00000554731 CMIPQ8IY22 773 aa10.92□□□□□ -0.66
RDH11-207ENST00000554731 CNOT9Q92600 299 aaKnown RBP10.92□□□□□ -0.66
RDH11-207ENST00000554731 FBXO17Q96EF6 278 aa10.92□□□□□ -0.66
RDH11-207ENST00000554731 NEURL3Q96EH8 262 aa10.92□□□□□ -0.66
RDH11-207ENST00000554731 LGALS13Q9UHV8 139 aa10.92□□□□□ -0.66
RDH11-207ENST00000554731 KCNS2Q9ULS6 477 aa10.92□□□□□ -0.66
RDH11-207ENST00000554731 TMEM72A0PK05 275 aa10.91□□□□□ -0.66
RDH11-207ENST00000554731 NDUFS8O00217 210 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms