RNA–Protein interactions for RNA: ENST00000554656.5

SHMT2-215, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-215ENST00000554656 HIVEP2P31629 2446 aa9.44□□□□□ -0.9
SHMT2-215ENST00000554656 A0A0J9YW62 118 aa9.44□□□□□ -0.9
SHMT2-215ENST00000554656 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.44□□□□□ -0.9
SHMT2-215ENST00000554656 EIF1AYO14602 144 aaKnown RBP9.44□□□□□ -0.9
SHMT2-215ENST00000554656 ARHGEF9O43307 516 aa9.44□□□□□ -0.9
SHMT2-215ENST00000554656 OIP5O43482 229 aa9.44□□□□□ -0.9
SHMT2-215ENST00000554656 CXCL13O43927 109 aa9.44□□□□□ -0.9
SHMT2-215ENST00000554656 SS18L1O75177 396 aaPredicted RBP9.44□□□□□ -0.9
SHMT2-215ENST00000554656 SOX30O94993 753 aa9.44□□□□□ -0.9
SHMT2-215ENST00000554656 KCNK2O95069 426 aa9.44□□□□□ -0.9
SHMT2-215ENST00000554656 BAG2O95816 211 aa9.44□□□□□ -0.9
SHMT2-215ENST00000554656 NGFRP08138 427 aa9.44□□□□□ -0.9
SHMT2-215ENST00000554656 RAP2AP10114 183 aa9.44□□□□□ -0.9
SHMT2-215ENST00000554656 FCGR2AP12318 317 aa9.44□□□□□ -0.9
SHMT2-215ENST00000554656 NID1P14543 1247 aa9.44□□□□□ -0.9
SHMT2-215ENST00000554656 ZNF17P17021 662 aa9.44□□□□□ -0.9
SHMT2-215ENST00000554656 IL11P20809 199 aa9.44□□□□□ -0.9
SHMT2-215ENST00000554656 SHC1P29353 583 aa9.44□□□□□ -0.9
SHMT2-215ENST00000554656 EIF1AXP47813 144 aaKnown RBP9.44□□□□□ -0.9
SHMT2-215ENST00000554656 DSTNP60981 165 aa9.44□□□□□ -0.9
SHMT2-215ENST00000554656 RPS3AP61247 264 aaKnown RBP9.44□□□□□ -0.9
SHMT2-215ENST00000554656 CHRNB3Q05901 458 aa9.44□□□□□ -0.9
SHMT2-215ENST00000554656 FGFBP1Q14512 234 aa9.44□□□□□ -0.9
SHMT2-215ENST00000554656 CD226Q15762 336 aa9.44□□□□□ -0.9
SHMT2-215ENST00000554656 ADRM1Q16186 407 aa9.44□□□□□ -0.9
SHMT2-215ENST00000554656 DUSP5Q16690 384 aa9.44□□□□□ -0.9
SHMT2-215ENST00000554656 SPDYE7PQ495Y7 208 aa9.44□□□□□ -0.9
SHMT2-215ENST00000554656 FAM98BQ52LJ0 330 aaKnown RBP9.44□□□□□ -0.9
SHMT2-215ENST00000554656 GCNT6Q5T4J0 391 aa9.44□□□□□ -0.9
SHMT2-215ENST00000554656 MFSD12Q6NUT3 480 aa9.44□□□□□ -0.9
SHMT2-215ENST00000554656 FIGNL1Q6PIW4 674 aa9.44□□□□□ -0.9
SHMT2-215ENST00000554656 PRSS57Q6UWY2 283 aa9.44□□□□□ -0.9
SHMT2-215ENST00000554656 C20orf204Q6ZNR8 217 aa9.44□□□□□ -0.9
SHMT2-215ENST00000554656 CCDC80Q76M96 950 aa9.44□□□□□ -0.9
SHMT2-215ENST00000554656 C6orf120Q7Z4R8 191 aa9.44□□□□□ -0.9
SHMT2-215ENST00000554656 C10orf111Q8N326 155 aa9.44□□□□□ -0.9
SHMT2-215ENST00000554656 GTPBP8Q8N3Z3 284 aaPredicted RBP9.44□□□□□ -0.9
SHMT2-215ENST00000554656 SLC16A11Q8NCK7 471 aa9.44□□□□□ -0.9
SHMT2-215ENST00000554656 NUP43Q8NFH3 380 aa9.44□□□□□ -0.9
SHMT2-215ENST00000554656 OR6K3Q8NGY3 331 aa9.44□□□□□ -0.9
SHMT2-215ENST00000554656 GPR151Q8TDV0 419 aa9.44□□□□□ -0.9
SHMT2-215ENST00000554656 PIGTQ969N2 578 aa9.44□□□□□ -0.9
SHMT2-215ENST00000554656 FAM162AQ96A26 154 aa9.44□□□□□ -0.9
SHMT2-215ENST00000554656 SLCO4A1Q96BD0 722 aa9.44□□□□□ -0.9
SHMT2-215ENST00000554656 C16orf58Q96GQ5 468 aa9.44□□□□□ -0.9
SHMT2-215ENST00000554656 SLC35G5Q96KT7 338 aa9.44□□□□□ -0.9
SHMT2-215ENST00000554656 TMEM185BQ9H7F4 350 aa9.44□□□□□ -0.9
SHMT2-215ENST00000554656 A4GALTQ9NPC4 353 aa9.44□□□□□ -0.9
SHMT2-215ENST00000554656 PLSCR4Q9NRQ2 329 aa9.44□□□□□ -0.9
SHMT2-215ENST00000554656 MED17Q9NVC6 651 aa9.44□□□□□ -0.9
SHMT2-215ENST00000554656 GPATCH2Q9NW75 528 aa9.44□□□□□ -0.9
SHMT2-215ENST00000554656 RIMS3Q9UJD0 308 aa9.44□□□□□ -0.9
SHMT2-215ENST00000554656 MRTO4Q9UKD2 239 aaKnown RBP9.44□□□□□ -0.9
SHMT2-215ENST00000554656 FAF1Q9UNN5 650 aaPredicted RBP9.44□□□□□ -0.9
SHMT2-215ENST00000554656 USP22Q9UPT9 525 aa9.44□□□□□ -0.9
SHMT2-215ENST00000554656 SONP18583 2426 aaKnown RBP9.44□□□□□ -0.9
SHMT2-215ENST00000554656 C7orf72A4D263 438 aa9.43□□□□□ -0.9
SHMT2-215ENST00000554656 TTC36A6NLP5 189 aa9.43□□□□□ -0.9
SHMT2-215ENST00000554656 KIAA1324LA8MWY0 1029 aaPredicted RBP9.43□□□□□ -0.9
SHMT2-215ENST00000554656 TNFSF11O14788 317 aa9.43□□□□□ -0.9
SHMT2-215ENST00000554656 SMAD7O15105 426 aaKnown RBP9.43□□□□□ -0.9
SHMT2-215ENST00000554656 ADAMDEC1O15204 470 aa9.43□□□□□ -0.9
SHMT2-215ENST00000554656 NDUFB5O43674 189 aa9.43□□□□□ -0.9
SHMT2-215ENST00000554656 AGR2O95994 175 aa9.43□□□□□ -0.9
SHMT2-215ENST00000554656 NCK1P16333 377 aa9.43□□□□□ -0.9
SHMT2-215ENST00000554656 FPR1P21462 350 aa9.43□□□□□ -0.9
SHMT2-215ENST00000554656 FASP25445 335 aa9.43□□□□□ -0.9
SHMT2-215ENST00000554656 AGTR1P30556 359 aa9.43□□□□□ -0.9
SHMT2-215ENST00000554656 KDELR2P33947 212 aa9.43□□□□□ -0.9
SHMT2-215ENST00000554656 CRATP43155 626 aa9.43□□□□□ -0.9
SHMT2-215ENST00000554656 PTH2RP49190 550 aa9.43□□□□□ -0.9
SHMT2-215ENST00000554656 PRIM2P49643 509 aa9.43□□□□□ -0.9
SHMT2-215ENST00000554656 CLK3P49761 638 aaKnown RBP9.43□□□□□ -0.9
SHMT2-215ENST00000554656 KHKP50053 298 aa9.43□□□□□ -0.9
SHMT2-215ENST00000554656 PRKAG1P54619 331 aa9.43□□□□□ -0.9
SHMT2-215ENST00000554656 PSMD4P55036 377 aaKnown RBP9.43□□□□□ -0.9
SHMT2-215ENST00000554656 GNA13Q14344 377 aa9.43□□□□□ -0.9
SHMT2-215ENST00000554656 SGCBQ16585 318 aa9.43□□□□□ -0.9
SHMT2-215ENST00000554656 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.43□□□□□ -0.9
SHMT2-215ENST00000554656 CCNJQ5T5M9 372 aa9.43□□□□□ -0.9
SHMT2-215ENST00000554656 PRAMEF8Q5VWM4 474 aa9.43□□□□□ -0.9
SHMT2-215ENST00000554656 PRAMEF7Q5VXH5 474 aa9.43□□□□□ -0.9
SHMT2-215ENST00000554656 PPP4R4Q6NUP7 873 aa9.43□□□□□ -0.9
SHMT2-215ENST00000554656 CBLL1Q75N03 491 aa9.43□□□□□ -0.9
SHMT2-215ENST00000554656 EIF3MQ7L2H7 374 aaKnown RBP9.43□□□□□ -0.9
SHMT2-215ENST00000554656 PATL1Q86TB9 770 aaKnown RBP9.43□□□□□ -0.9
SHMT2-215ENST00000554656 RNF130Q86XS8 419 aa9.43□□□□□ -0.9
SHMT2-215ENST00000554656 CDRT4Q8N9R6 151 aa9.43□□□□□ -0.9
SHMT2-215ENST00000554656 ZNF524Q96C55 264 aa9.43□□□□□ -0.9
SHMT2-215ENST00000554656 SH3YL1Q96HL8 342 aaPredicted RBP9.43□□□□□ -0.9
SHMT2-215ENST00000554656 GMPPAQ96IJ6 420 aaPredicted RBP9.43□□□□□ -0.9
SHMT2-215ENST00000554656 MS4A4EQ96PG1 132 aa9.43□□□□□ -0.9
SHMT2-215ENST00000554656 GSX2Q9BZM3 304 aa9.43□□□□□ -0.9
SHMT2-215ENST00000554656 PIF1Q9H611 641 aa9.43□□□□□ -0.9
SHMT2-215ENST00000554656 C8orf4Q9NR00 106 aa9.43□□□□□ -0.9
SHMT2-215ENST00000554656 ZCCHC3Q9NUD5 404 aaKnown RBP9.43□□□□□ -0.9
SHMT2-215ENST00000554656 ANGPT4Q9Y264 503 aa9.43□□□□□ -0.9
SHMT2-215ENST00000554656 SNX8Q9Y5X2 465 aa9.43□□□□□ -0.9
SHMT2-215ENST00000554656 A0A087WZY1 265 aa9.42□□□□□ -0.9
SHMT2-215ENST00000554656 NPIPA5A0A0B4J1W7 369 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms