RNA–Protein interactions for RNA: ENST00000554365.1

SPTLC2-202, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 2

Gene SPTLC2, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-202ENST00000554365 SMPD2O60906 423 aa12.59□□□□□ -0.39
SPTLC2-202ENST00000554365 SMNDC1O75940 238 aaKnown RBP eCLIP12.59□□□□□ -0.39
SPTLC2-202ENST00000554365 ZNF682O95780 498 aa12.59□□□□□ -0.39
SPTLC2-202ENST00000554365 IFNA14P01570 189 aa12.59□□□□□ -0.39
SPTLC2-202ENST00000554365 TNFRSF1BP20333 461 aa12.59□□□□□ -0.39
SPTLC2-202ENST00000554365 CD226Q15762 336 aa12.59□□□□□ -0.39
SPTLC2-202ENST00000554365 NRF1Q16656 503 aa12.59□□□□□ -0.39
SPTLC2-202ENST00000554365 IQCCQ4KMZ1 466 aa12.59□□□□□ -0.39
SPTLC2-202ENST00000554365 LIN52Q52LA3 116 aa12.59□□□□□ -0.39
SPTLC2-202ENST00000554365 ZNF311Q5JNZ3 666 aa12.59□□□□□ -0.39
SPTLC2-202ENST00000554365 MRPL2Q5T653 305 aaKnown RBP12.59□□□□□ -0.39
SPTLC2-202ENST00000554365 RNF220Q5VTB9 566 aa12.59□□□□□ -0.39
SPTLC2-202ENST00000554365 TSEN54Q7Z6J9 526 aaKnown RBP12.59□□□□□ -0.39
SPTLC2-202ENST00000554365 ADGRE4PQ86SQ3 457 aa12.59□□□□□ -0.39
SPTLC2-202ENST00000554365 GRAMD2AQ8IUY3 354 aa12.59□□□□□ -0.39
SPTLC2-202ENST00000554365 CIARTQ8N365 385 aaPredicted RBP12.59□□□□□ -0.39
SPTLC2-202ENST00000554365 FAM71CQ8NEG0 241 aa12.59□□□□□ -0.39
SPTLC2-202ENST00000554365 OR4D11Q8NGI4 311 aa12.59□□□□□ -0.39
SPTLC2-202ENST00000554365 CANT1Q8WVQ1 401 aa12.59□□□□□ -0.39
SPTLC2-202ENST00000554365 PYURFQ96I23 114 aa12.59□□□□□ -0.39
SPTLC2-202ENST00000554365 ARHGDIGQ99819 225 aa12.59□□□□□ -0.39
SPTLC2-202ENST00000554365 SPATA5L1Q9BVQ7 753 aa12.59□□□□□ -0.39
SPTLC2-202ENST00000554365 OR2B2Q9GZK3 357 aa12.59□□□□□ -0.39
SPTLC2-202ENST00000554365 HOXD1Q9GZZ0 328 aa12.59□□□□□ -0.39
SPTLC2-202ENST00000554365 RLIMQ9NVW2 624 aa12.59□□□□□ -0.39
SPTLC2-202ENST00000554365 ADPRHL2Q9NX46 363 aa12.59□□□□□ -0.39
SPTLC2-202ENST00000554365 TAS2R10Q9NYW0 307 aa12.59□□□□□ -0.39
SPTLC2-202ENST00000554365 SAMD4AQ9UPU9 718 aaKnown RBP12.59□□□□□ -0.39
SPTLC2-202ENST00000554365 DTNAQ9Y4J8 743 aa12.59□□□□□ -0.39
SPTLC2-202ENST00000554365 HEATR5AQ86XA9 2040 aa12.59□□□□□ -0.39
SPTLC2-202ENST00000554365 A0A1W2PQD3 144 aa12.58□□□□□ -0.4
SPTLC2-202ENST00000554365 DHRS12A0PJE2 317 aa12.58□□□□□ -0.4
SPTLC2-202ENST00000554365 CDHR4A6H8M9 788 aa12.58□□□□□ -0.4
SPTLC2-202ENST00000554365 SERINC4A6NH21 518 aa12.58□□□□□ -0.4
SPTLC2-202ENST00000554365 B4DXG7 233 aa12.58□□□□□ -0.4
SPTLC2-202ENST00000554365 H3BNX3 289 aa12.58□□□□□ -0.4
SPTLC2-202ENST00000554365 SMAD7O15105 426 aaKnown RBP12.58□□□□□ -0.4
SPTLC2-202ENST00000554365 STAMBPO95630 424 aa12.58□□□□□ -0.4
SPTLC2-202ENST00000554365 LGI1O95970 557 aa12.58□□□□□ -0.4
SPTLC2-202ENST00000554365 GPIP06744 558 aa12.58□□□□□ -0.4
SPTLC2-202ENST00000554365 FESP07332 822 aa12.58□□□□□ -0.4
SPTLC2-202ENST00000554365 IL7RP16871 459 aa12.58□□□□□ -0.4
SPTLC2-202ENST00000554365 TCEA1P23193 301 aaKnown RBP12.58□□□□□ -0.4
SPTLC2-202ENST00000554365 PCSK6P29122 969 aa12.58□□□□□ -0.4
SPTLC2-202ENST00000554365 EVI2BP34910 448 aa12.58□□□□□ -0.4
SPTLC2-202ENST00000554365 GFRA1P56159 465 aa12.58□□□□□ -0.4
SPTLC2-202ENST00000554365 SNTA1Q13424 505 aa12.58□□□□□ -0.4
SPTLC2-202ENST00000554365 NPTX1Q15818 432 aa12.58□□□□□ -0.4
SPTLC2-202ENST00000554365 TMEM81Q6P7N7 255 aa12.58□□□□□ -0.4
SPTLC2-202ENST00000554365 P4HA3Q7Z4N8 544 aa12.58□□□□□ -0.4
SPTLC2-202ENST00000554365 WDSUB1Q8N9V3 476 aa12.58□□□□□ -0.4
SPTLC2-202ENST00000554365 PAPD5Q8NDF8 572 aaKnown RBP12.58□□□□□ -0.4
SPTLC2-202ENST00000554365 CNOT9Q92600 299 aaKnown RBP12.58□□□□□ -0.4
SPTLC2-202ENST00000554365 TPD52L3Q96J77 140 aa12.58□□□□□ -0.4
SPTLC2-202ENST00000554365 COX4I2Q96KJ9 171 aa12.58□□□□□ -0.4
SPTLC2-202ENST00000554365 C7orf34Q96L11 122 aa12.58□□□□□ -0.4
SPTLC2-202ENST00000554365 Q96MF0 132 aa12.58□□□□□ -0.4
SPTLC2-202ENST00000554365 KLHDC3Q9BQ90 382 aa12.58□□□□□ -0.4
SPTLC2-202ENST00000554365 KLHL28Q9NXS3 571 aa12.58□□□□□ -0.4
SPTLC2-202ENST00000554365 CLCF1Q9UBD9 225 aa12.58□□□□□ -0.4
SPTLC2-202ENST00000554365 ABCG2Q9UNQ0 655 aa12.58□□□□□ -0.4
SPTLC2-202ENST00000554365 TESMINQ9Y4I5 508 aa12.58□□□□□ -0.4
SPTLC2-202ENST00000554365 A0A1W2PNV4 684 aa12.57□□□□□ -0.4
SPTLC2-202ENST00000554365 ADAM11O75078 769 aa12.57□□□□□ -0.4
SPTLC2-202ENST00000554365 UMPSP11172 480 aa12.57□□□□□ -0.4
SPTLC2-202ENST00000554365 CHMP24386 653 aa12.57□□□□□ -0.4
SPTLC2-202ENST00000554365 SLC7A1P30825 629 aa12.57□□□□□ -0.4
SPTLC2-202ENST00000554365 MAGEA2P43356 314 aa12.57□□□□□ -0.4
SPTLC2-202ENST00000554365 LHX2P50458 406 aa12.57□□□□□ -0.4
SPTLC2-202ENST00000554365 FAM27E3Q08E93 113 aa12.57□□□□□ -0.4
SPTLC2-202ENST00000554365 LARS2Q15031 903 aaKnown RBP12.57□□□□□ -0.4
SPTLC2-202ENST00000554365 NDUFAF6Q330K2 333 aa12.57□□□□□ -0.4
SPTLC2-202ENST00000554365 IFI44LQ53G44 452 aa12.57□□□□□ -0.4
SPTLC2-202ENST00000554365 EEF1A1P5Q5VTE0 462 aa12.57□□□□□ -0.4
SPTLC2-202ENST00000554365 AAGABQ6PD74 315 aa12.57□□□□□ -0.4
SPTLC2-202ENST00000554365 MARCH3Q86UD3 253 aa12.57□□□□□ -0.4
SPTLC2-202ENST00000554365 PRIMA1Q86XR5 153 aa12.57□□□□□ -0.4
SPTLC2-202ENST00000554365 PLCZ1Q86YW0 608 aa12.57□□□□□ -0.4
SPTLC2-202ENST00000554365 RBM45Q8IUH3 476 aaKnown RBP12.57□□□□□ -0.4
SPTLC2-202ENST00000554365 CMIPQ8IY22 773 aa12.57□□□□□ -0.4
SPTLC2-202ENST00000554365 LRRC75A-AS1Q8N1F1 130 aa12.57□□□□□ -0.4
SPTLC2-202ENST00000554365 ZNF614Q8N883 585 aa12.57□□□□□ -0.4
SPTLC2-202ENST00000554365 CNEP1R1Q8N9A8 125 aa12.57□□□□□ -0.4
SPTLC2-202ENST00000554365 GATSQ8NAP1 163 aa12.57□□□□□ -0.4
SPTLC2-202ENST00000554365 SLC26A7Q8TE54 656 aa12.57□□□□□ -0.4
SPTLC2-202ENST00000554365 RASSF5Q8WWW0 418 aa12.57□□□□□ -0.4
SPTLC2-202ENST00000554365 PYDC1Q8WXC3 89 aa12.57□□□□□ -0.4
SPTLC2-202ENST00000554365 PIGTQ969N2 578 aa12.57□□□□□ -0.4
SPTLC2-202ENST00000554365 TMCO6Q96DC7 493 aa12.57□□□□□ -0.4
SPTLC2-202ENST00000554365 PIK3IP1Q96FE7 263 aa12.57□□□□□ -0.4
SPTLC2-202ENST00000554365 SLC47A1Q96FL8 570 aa12.57□□□□□ -0.4
SPTLC2-202ENST00000554365 RSRC1Q96IZ7 334 aaKnown RBP12.57□□□□□ -0.4
SPTLC2-202ENST00000554365 SFXN2Q96NB2 322 aa12.57□□□□□ -0.4
SPTLC2-202ENST00000554365 UCN2Q96RP3 112 aa12.57□□□□□ -0.4
SPTLC2-202ENST00000554365 SEPHS2Q99611 448 aa12.57□□□□□ -0.4
SPTLC2-202ENST00000554365 MAGIXQ9H6Y5 334 aa12.57□□□□□ -0.4
SPTLC2-202ENST00000554365 UBTD1Q9HAC8 227 aa12.57□□□□□ -0.4
SPTLC2-202ENST00000554365 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.57□□□□□ -0.4
SPTLC2-202ENST00000554365 DKKL1Q9UK85 242 aa12.57□□□□□ -0.4
SPTLC2-202ENST00000554365 FBXL2Q9UKC9 423 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms