RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 KDM4EB2RXH2 506 aaPredicted RBP5.46□□□□□ -1.54
VPS33B-203ENST00000554264 HNRNPCL2B2RXH8 293 aa5.46□□□□□ -1.54
VPS33B-203ENST00000554264 HNRNPCL3B7ZW38 293 aa5.46□□□□□ -1.54
VPS33B-203ENST00000554264 CASKO14936 926 aa5.46□□□□□ -1.54
VPS33B-203ENST00000554264 BET1O15155 118 aa5.46□□□□□ -1.54
VPS33B-203ENST00000554264 KLK10O43240 276 aa5.46□□□□□ -1.54
VPS33B-203ENST00000554264 PRAMEF10O60809 474 aa5.46□□□□□ -1.54
VPS33B-203ENST00000554264 PRAF2O60831 178 aa5.46□□□□□ -1.54
VPS33B-203ENST00000554264 STX11O75558 287 aa5.46□□□□□ -1.54
VPS33B-203ENST00000554264 AGR2O95994 175 aa5.46□□□□□ -1.54
VPS33B-203ENST00000554264 IFNA7P01567 189 aa5.46□□□□□ -1.54
VPS33B-203ENST00000554264 HBQ1P09105 142 aa5.46□□□□□ -1.54
VPS33B-203ENST00000554264 HNRNPCL4P0DMR1 293 aa5.46□□□□□ -1.54
VPS33B-203ENST00000554264 SRCP12931 536 aa5.46□□□□□ -1.54
VPS33B-203ENST00000554264 ARSBP15848 533 aa5.46□□□□□ -1.54
VPS33B-203ENST00000554264 ZNF8P17098 575 aaPredicted RBP5.46□□□□□ -1.54
VPS33B-203ENST00000554264 CD22P20273 847 aa5.46□□□□□ -1.54
VPS33B-203ENST00000554264 LHCGRP22888 699 aa5.46□□□□□ -1.54
VPS33B-203ENST00000554264 POU1F1P28069 291 aa5.46□□□□□ -1.54
VPS33B-203ENST00000554264 IMPA1P29218 277 aa5.46□□□□□ -1.54
VPS33B-203ENST00000554264 NNMTP40261 264 aa5.46□□□□□ -1.54
VPS33B-203ENST00000554264 OR3A3P47888 321 aa5.46□□□□□ -1.54
VPS33B-203ENST00000554264 MTNR1AP48039 350 aa5.46□□□□□ -1.54
VPS33B-203ENST00000554264 EVX1P49640 407 aa5.46□□□□□ -1.54
VPS33B-203ENST00000554264 NXPH1P58417 271 aa5.46□□□□□ -1.54
VPS33B-203ENST00000554264 ST8SIA6P61647 398 aa5.46□□□□□ -1.54
VPS33B-203ENST00000554264 RPS13P62277 151 aaKnown RBP5.46□□□□□ -1.54
VPS33B-203ENST00000554264 EFNB1P98172 346 aa5.46□□□□□ -1.54
VPS33B-203ENST00000554264 TAP2Q03519 686 aa5.46□□□□□ -1.54
VPS33B-203ENST00000554264 TSPAN31Q12999 210 aa5.46□□□□□ -1.54
VPS33B-203ENST00000554264 SLAMF1Q13291 335 aa5.46□□□□□ -1.54
VPS33B-203ENST00000554264 DDX39BQ13838 428 aaKnown RBP5.46□□□□□ -1.54
VPS33B-203ENST00000554264 NFE2L1Q14494 772 aa5.46□□□□□ -1.54
VPS33B-203ENST00000554264 BAK1Q16611 211 aa5.46□□□□□ -1.54
VPS33B-203ENST00000554264 ZXDCQ2QGD7 858 aaPredicted RBP5.46□□□□□ -1.54
VPS33B-203ENST00000554264 SYT14P1Q58G82 188 aa5.46□□□□□ -1.54
VPS33B-203ENST00000554264 HENMT1Q5T8I9 393 aaKnown RBP5.46□□□□□ -1.54
VPS33B-203ENST00000554264 LIPKQ5VXJ0 399 aa5.46□□□□□ -1.54
VPS33B-203ENST00000554264 CEACAM20Q6UY09 585 aa5.46□□□□□ -1.54
VPS33B-203ENST00000554264 RASSF6Q6ZTQ3 369 aa5.46□□□□□ -1.54
VPS33B-203ENST00000554264 DPPA4Q7L190 304 aa5.46□□□□□ -1.54
VPS33B-203ENST00000554264 ADIPOR2Q86V24 386 aa5.46□□□□□ -1.54
VPS33B-203ENST00000554264 NUDT13Q86X67 352 aa5.46□□□□□ -1.54
VPS33B-203ENST00000554264 GPALPP1Q8IXQ4 340 aa5.46□□□□□ -1.54
VPS33B-203ENST00000554264 ELMOD2Q8IZ81 293 aa5.46□□□□□ -1.54
VPS33B-203ENST00000554264 TBC1D19Q8N5T2 526 aa5.46□□□□□ -1.54
VPS33B-203ENST00000554264 ZNF366Q8N895 744 aa5.46□□□□□ -1.54
VPS33B-203ENST00000554264 TCEANCQ8N8B7 351 aa5.46□□□□□ -1.54
VPS33B-203ENST00000554264 SPERTQ8NA61 448 aa5.46□□□□□ -1.54
VPS33B-203ENST00000554264 POGLUT1Q8NBL1 392 aa5.46□□□□□ -1.54
VPS33B-203ENST00000554264 OR52I1Q8NGK6 324 aa5.46□□□□□ -1.54
VPS33B-203ENST00000554264 OR9A1PQ8NGU1 263 aa5.46□□□□□ -1.54
VPS33B-203ENST00000554264 SUN3Q8TAQ9 357 aa5.46□□□□□ -1.54
VPS33B-203ENST00000554264 ZNF480Q8WV37 535 aa5.46□□□□□ -1.54
VPS33B-203ENST00000554264 ASB13Q8WXK3 278 aa5.46□□□□□ -1.54
VPS33B-203ENST00000554264 HGDQ93099 445 aa5.46□□□□□ -1.54
VPS33B-203ENST00000554264 MAL2Q969L2 176 aa5.46□□□□□ -1.54
VPS33B-203ENST00000554264 C1GALT1C1Q96EU7 318 aa5.46□□□□□ -1.54
VPS33B-203ENST00000554264 MRPL48Q96GC5 212 aaKnown RBP5.46□□□□□ -1.54
VPS33B-203ENST00000554264 LINC00615Q96LM1 132 aaPredicted RBP5.46□□□□□ -1.54
VPS33B-203ENST00000554264 IL4I1Q96RQ9 567 aa5.46□□□□□ -1.54
VPS33B-203ENST00000554264 AIF1LQ9BQI0 150 aa5.46□□□□□ -1.54
VPS33B-203ENST00000554264 TTYH2Q9BSA4 534 aa5.46□□□□□ -1.54
VPS33B-203ENST00000554264 MRI1Q9BV20 369 aa5.46□□□□□ -1.54
VPS33B-203ENST00000554264 KATNB1Q9BVA0 655 aa5.46□□□□□ -1.54
VPS33B-203ENST00000554264 FAIM2Q9BWQ8 316 aa5.46□□□□□ -1.54
VPS33B-203ENST00000554264 PINK1Q9BXM7 581 aa5.46□□□□□ -1.54
VPS33B-203ENST00000554264 ZNF717Q9BY31 904 aaPredicted RBP5.46□□□□□ -1.54
VPS33B-203ENST00000554264 ATG10Q9H0Y0 220 aa5.46□□□□□ -1.54
VPS33B-203ENST00000554264 FN3KQ9H479 309 aa5.46□□□□□ -1.54
VPS33B-203ENST00000554264 PPP1R3EQ9H7J1 279 aa5.46□□□□□ -1.54
VPS33B-203ENST00000554264 CACYBPQ9HB71 228 aaKnown RBP5.46□□□□□ -1.54
VPS33B-203ENST00000554264 RANGRFQ9HD47 186 aaPredicted RBP5.46□□□□□ -1.54
VPS33B-203ENST00000554264 TMEM184CQ9NVA4 438 aa5.46□□□□□ -1.54
VPS33B-203ENST00000554264 MCUBQ9NWR8 336 aa5.46□□□□□ -1.54
VPS33B-203ENST00000554264 KLHL28Q9NXS3 571 aa5.46□□□□□ -1.54
VPS33B-203ENST00000554264 AASSQ9UDR5 926 aa5.46□□□□□ -1.54
VPS33B-203ENST00000554264 IL17BQ9UHF5 180 aa5.46□□□□□ -1.54
VPS33B-203ENST00000554264 NUFIP1Q9UHK0 495 aaKnown RBP5.46□□□□□ -1.54
VPS33B-203ENST00000554264 SLC13A4Q9UKG4 626 aa5.46□□□□□ -1.54
VPS33B-203ENST00000554264 GPR34Q9UPC5 381 aa5.46□□□□□ -1.54
VPS33B-203ENST00000554264 NUBP2Q9Y5Y2 271 aa5.46□□□□□ -1.54
VPS33B-203ENST00000554264 AUP1Q9Y679 476 aa5.46□□□□□ -1.54
VPS33B-203ENST00000554264 NAV2Q8IVL1 2488 aa5.46□□□□□ -1.54
VPS33B-203ENST00000554264 COL6A6A6NMZ7 2263 aa5.45□□□□□ -1.54
VPS33B-203ENST00000554264 TRBV4-1A0A0J9YWV2 114 aa5.45□□□□□ -1.54
VPS33B-203ENST00000554264 A0A1B0GW55 424 aa5.45□□□□□ -1.54
VPS33B-203ENST00000554264 C7orf66A4D0T2 115 aa5.45□□□□□ -1.54
VPS33B-203ENST00000554264 NAP1L6A6NFF2 107 aa5.45□□□□□ -1.54
VPS33B-203ENST00000554264 A8MU76 341 aa5.45□□□□□ -1.54
VPS33B-203ENST00000554264 C10orf142B7Z368 130 aa5.45□□□□□ -1.54
VPS33B-203ENST00000554264 INMT-MINDY4F8WBC2 141 aa5.45□□□□□ -1.54
VPS33B-203ENST00000554264 PYCARD-AS1I3L0S3 204 aa5.45□□□□□ -1.54
VPS33B-203ENST00000554264 YY2O15391 372 aa5.45□□□□□ -1.54
VPS33B-203ENST00000554264 PLA2G10O15496 165 aa5.45□□□□□ -1.54
VPS33B-203ENST00000554264 UBXN7O94888 489 aa5.45□□□□□ -1.54
VPS33B-203ENST00000554264 C1orf105O95561 183 aa5.45□□□□□ -1.54
VPS33B-203ENST00000554264 SLC16A8O95907 504 aa5.45□□□□□ -1.54
VPS33B-203ENST00000554264 SOD1P00441 154 aa5.45□□□□□ -1.54
VPS33B-203ENST00000554264 SERPINA3P01011 423 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms