RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 OR2AG1Q9H205 316 aa1.87□□□□□ -2.11
SRP54-204ENST00000553923 PPA2Q9H2U2 334 aa1.87□□□□□ -2.11
SRP54-204ENST00000553923 GAL3ST2Q9H3Q3 398 aa1.87□□□□□ -2.11
SRP54-204ENST00000553923 LIME1Q9H400 295 aa1.87□□□□□ -2.11
SRP54-204ENST00000553923 FNDC4Q9H6D8 234 aaPredicted RBP1.87□□□□□ -2.11
SRP54-204ENST00000553923 TDRD3Q9H7E2 651 aaKnown RBP1.87□□□□□ -2.11
SRP54-204ENST00000553923 UGT1A10Q9HAW8 530 aa1.87□□□□□ -2.11
SRP54-204ENST00000553923 ELL3Q9HB65 397 aaPredicted RBP1.87□□□□□ -2.11
SRP54-204ENST00000553923 BEX1Q9HBH7 125 aa1.87□□□□□ -2.11
SRP54-204ENST00000553923 SPACA1Q9HBV2 294 aa1.87□□□□□ -2.11
SRP54-204ENST00000553923 LYRM4Q9HD34 91 aa1.87□□□□□ -2.11
SRP54-204ENST00000553923 NT5MQ9NPB1 228 aa1.87□□□□□ -2.11
SRP54-204ENST00000553923 INPP5EQ9NRR6 644 aa1.87□□□□□ -2.11
SRP54-204ENST00000553923 LYARQ9NX58 379 aaKnown RBP1.87□□□□□ -2.11
SRP54-204ENST00000553923 RCOR3Q9P2K3 495 aaPredicted RBP1.87□□□□□ -2.11
SRP54-204ENST00000553923 MBD2Q9UBB5 411 aa1.87□□□□□ -2.11
SRP54-204ENST00000553923 KLK11Q9UBX7 282 aa1.87□□□□□ -2.11
SRP54-204ENST00000553923 CYTH4Q9UIA0 394 aa1.87□□□□□ -2.11
SRP54-204ENST00000553923 NUP50Q9UKX7 468 aa1.87□□□□□ -2.11
SRP54-204ENST00000553923 RNF24Q9Y225 148 aa1.87□□□□□ -2.11
SRP54-204ENST00000553923 EIF3LQ9Y262 564 aaKnown RBP1.87□□□□□ -2.11
SRP54-204ENST00000553923 C15orf41Q9Y2V0 281 aa1.87□□□□□ -2.11
SRP54-204ENST00000553923 DHRS7Q9Y394 339 aa1.87□□□□□ -2.11
SRP54-204ENST00000553923 AK6Q9Y3D8 172 aaKnown RBP1.87□□□□□ -2.11
SRP54-204ENST00000553923 PEX16Q9Y5Y5 336 aa1.87□□□□□ -2.11
SRP54-204ENST00000553923 KPTNQ9Y664 436 aa1.87□□□□□ -2.11
SRP54-204ENST00000553923 FRMPD4Q14CM0 1322 aa1.87□□□□□ -2.11
SRP54-204ENST00000553923 SALL1Q9NSC2 1324 aa1.87□□□□□ -2.11
SRP54-204ENST00000553923 INSRP06213 1382 aa1.86□□□□□ -2.11
SRP54-204ENST00000553923 TMEM94Q12767 1356 aa1.86□□□□□ -2.11
SRP54-204ENST00000553923 SPATA31D1Q6ZQQ2 1576 aa1.86□□□□□ -2.11
SRP54-204ENST00000553923 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP1.86□□□□□ -2.11
SRP54-204ENST00000553923 A0A1W2PR80 420 aa1.86□□□□□ -2.11
SRP54-204ENST00000553923 MEX3AA1L020 520 aaKnown RBP1.86□□□□□ -2.11
SRP54-204ENST00000553923 TRABD2BA6NFA1 517 aa1.86□□□□□ -2.11
SRP54-204ENST00000553923 FRG2CA6NGY1 282 aa1.86□□□□□ -2.11
SRP54-204ENST00000553923 LRRIQ3A6PVS8 624 aaPredicted RBP1.86□□□□□ -2.11
SRP54-204ENST00000553923 H3BMQ9 156 aa1.86□□□□□ -2.11
SRP54-204ENST00000553923 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP1.86□□□□□ -2.11
SRP54-204ENST00000553923 RAB29O14966 203 aa1.86□□□□□ -2.11
SRP54-204ENST00000553923 TAPBPO15533 448 aa1.86□□□□□ -2.11
SRP54-204ENST00000553923 ZNF749O43361 778 aa1.86□□□□□ -2.11
SRP54-204ENST00000553923 BCL2L11O43521 198 aa1.86□□□□□ -2.11
SRP54-204ENST00000553923 PFKFB2O60825 505 aa1.86□□□□□ -2.11
SRP54-204ENST00000553923 TOXO94900 526 aa1.86□□□□□ -2.11
SRP54-204ENST00000553923 OR2F2O95006 317 aa1.86□□□□□ -2.11
SRP54-204ENST00000553923 SCELO95171 688 aa1.86□□□□□ -2.11
SRP54-204ENST00000553923 OXSR1O95747 527 aaPredicted RBP1.86□□□□□ -2.11
SRP54-204ENST00000553923 AP2A1O95782 977 aa1.86□□□□□ -2.11
SRP54-204ENST00000553923 TMEM50AO95807 157 aa1.86□□□□□ -2.11
SRP54-204ENST00000553923 JCHAINP01591 159 aa1.86□□□□□ -2.11
SRP54-204ENST00000553923 PLEKP08567 350 aaPredicted RBP1.86□□□□□ -2.11
SRP54-204ENST00000553923 OR9G9P0C7N8 305 aa1.86□□□□□ -2.11
SRP54-204ENST00000553923 UBCP0CG48 685 aaKnown RBP1.86□□□□□ -2.11
SRP54-204ENST00000553923 RNH1P13489 461 aaKnown RBP1.86□□□□□ -2.11
SRP54-204ENST00000553923 HSD17B1P14061 328 aa1.86□□□□□ -2.11
SRP54-204ENST00000553923 ABOP16442 354 aa1.86□□□□□ -2.11
SRP54-204ENST00000553923 ZNF3P17036 446 aa1.86□□□□□ -2.11
SRP54-204ENST00000553923 CAPN2P17655 700 aa1.86□□□□□ -2.11
SRP54-204ENST00000553923 POLR2EP19388 210 aaKnown RBP1.86□□□□□ -2.11
SRP54-204ENST00000553923 AOC1P19801 751 aa1.86□□□□□ -2.11
SRP54-204ENST00000553923 CCNOP22674 350 aa1.86□□□□□ -2.11
SRP54-204ENST00000553923 STOMP27105 288 aa1.86□□□□□ -2.11
SRP54-204ENST00000553923 DCKP27707 260 aa1.86□□□□□ -2.11
SRP54-204ENST00000553923 LCN1P31025 176 aa1.86□□□□□ -2.11
SRP54-204ENST00000553923 RPL9P32969 192 aaKnown RBP1.86□□□□□ -2.11
SRP54-204ENST00000553923 CD80P33681 288 aa1.86□□□□□ -2.11
SRP54-204ENST00000553923 RPL4P36578 427 aaKnown RBP1.86□□□□□ -2.11
SRP54-204ENST00000553923 HTR2BP41595 481 aa1.86□□□□□ -2.11
SRP54-204ENST00000553923 CRYBB2P43320 205 aa1.86□□□□□ -2.11
SRP54-204ENST00000553923 GPR4P46093 362 aa1.86□□□□□ -2.11
SRP54-204ENST00000553923 ZFP36L2P47974 494 aaKnown RBP1.86□□□□□ -2.11
SRP54-204ENST00000553923 PGFP49763 221 aa1.86□□□□□ -2.11
SRP54-204ENST00000553923 EMDP50402 254 aa1.86□□□□□ -2.11
SRP54-204ENST00000553923 DUSP3P51452 185 aaPredicted RBP1.86□□□□□ -2.11
SRP54-204ENST00000553923 MAP3K7CLP57077 242 aa1.86□□□□□ -2.11
SRP54-204ENST00000553923 RPS6P62753 249 aaKnown RBP1.86□□□□□ -2.11
SRP54-204ENST00000553923 IRX3P78415 501 aaPredicted RBP1.86□□□□□ -2.11
SRP54-204ENST00000553923 MS4A2Q01362 244 aa1.86□□□□□ -2.11
SRP54-204ENST00000553923 DHODHQ02127 395 aa1.86□□□□□ -2.11
SRP54-204ENST00000553923 PAX5Q02548 391 aa1.86□□□□□ -2.11
SRP54-204ENST00000553923 ZNF177Q13360 481 aaPredicted RBP1.86□□□□□ -2.11
SRP54-204ENST00000553923 MAB21L1Q13394 359 aa1.86□□□□□ -2.11
SRP54-204ENST00000553923 VGLL4Q14135 290 aa1.86□□□□□ -2.11
SRP54-204ENST00000553923 SLC15A2Q16348 729 aa1.86□□□□□ -2.11
SRP54-204ENST00000553923 SLC5A12Q1EHB4 618 aa1.86□□□□□ -2.11
SRP54-204ENST00000553923 TEX44Q53QW1 395 aa1.86□□□□□ -2.11
SRP54-204ENST00000553923 C2CD6Q53TS8 623 aa1.86□□□□□ -2.11
SRP54-204ENST00000553923 SOHLH1Q5JUK2 328 aa1.86□□□□□ -2.11
SRP54-204ENST00000553923 PPM1LQ5SGD2 360 aa1.86□□□□□ -2.11
SRP54-204ENST00000553923 CCDC122Q5T0U0 273 aa1.86□□□□□ -2.11
SRP54-204ENST00000553923 C9orf135Q5VTT2 229 aa1.86□□□□□ -2.11
SRP54-204ENST00000553923 TTC23LQ6PF05 361 aa1.86□□□□□ -2.11
SRP54-204ENST00000553923 ATRAIDQ6UW56 229 aa1.86□□□□□ -2.11
SRP54-204ENST00000553923 GPRIN3Q6ZVF9 776 aa1.86□□□□□ -2.11
SRP54-204ENST00000553923 SLC16A14Q7RTX9 510 aa1.86□□□□□ -2.11
SRP54-204ENST00000553923 KCNMB4Q86W47 210 aa1.86□□□□□ -2.11
SRP54-204ENST00000553923 SPATA24Q86W54 205 aa1.86□□□□□ -2.11
SRP54-204ENST00000553923 TRIM69Q86WT6 500 aa1.86□□□□□ -2.11
SRP54-204ENST00000553923 HOGA1Q86XE5 327 aa1.86□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms