RNA–Protein interactions for RNA: ENST00000553617.5

TDP1-207, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 876 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-207ENST00000553617 OTUB2Q96DC9 234 aa3.2□□□□□ -1.9
TDP1-207ENST00000553617 PLEKHA8Q96JA3 519 aa3.2□□□□□ -1.9
TDP1-207ENST00000553617 AKR1E2Q96JD6 320 aa3.2□□□□□ -1.9
TDP1-207ENST00000553617 SERAC1Q96JX3 654 aa3.2□□□□□ -1.9
TDP1-207ENST00000553617 TMEM246Q9BRR3 403 aa3.2□□□□□ -1.9
TDP1-207ENST00000553617 ANGPTL4Q9BY76 406 aa3.2□□□□□ -1.9
TDP1-207ENST00000553617 PARD6GQ9BYG4 376 aaPredicted RBP3.2□□□□□ -1.9
TDP1-207ENST00000553617 GSDMCQ9BYG8 508 aa3.2□□□□□ -1.9
TDP1-207ENST00000553617 SLC25A51Q9H1U9 297 aa3.2□□□□□ -1.9
TDP1-207ENST00000553617 GOLPH3Q9H4A6 298 aa3.2□□□□□ -1.9
TDP1-207ENST00000553617 ASB8Q9H765 288 aa3.2□□□□□ -1.9
TDP1-207ENST00000553617 ZNF696Q9H7X3 374 aa3.2□□□□□ -1.9
TDP1-207ENST00000553617 ANKRA2Q9H9E1 313 aa3.2□□□□□ -1.9
TDP1-207ENST00000553617 POLD4Q9HCU8 107 aa3.2□□□□□ -1.9
TDP1-207ENST00000553617 CCNB1IP1Q9NPC3 277 aa3.2□□□□□ -1.9
TDP1-207ENST00000553617 RRAGDQ9NQL2 400 aaPredicted RBP3.2□□□□□ -1.9
TDP1-207ENST00000553617 TXLNGQ9NUQ3 528 aa3.2□□□□□ -1.9
TDP1-207ENST00000553617 DCAF13Q9NV06 445 aaKnown RBP3.2□□□□□ -1.9
TDP1-207ENST00000553617 ZNF446Q9NWS9 450 aa3.2□□□□□ -1.9
TDP1-207ENST00000553617 DUS2Q9NX74 493 aaKnown RBP3.2□□□□□ -1.9
TDP1-207ENST00000553617 MS4A12Q9NXJ0 267 aa3.2□□□□□ -1.9
TDP1-207ENST00000553617 EIF3KQ9UBQ5 218 aaKnown RBP3.2□□□□□ -1.9
TDP1-207ENST00000553617 CIDEBQ9UHD4 219 aa3.2□□□□□ -1.9
TDP1-207ENST00000553617 CDH9Q9ULB4 789 aa3.2□□□□□ -1.9
TDP1-207ENST00000553617 EIF3LQ9Y262 564 aaKnown RBP3.2□□□□□ -1.9
TDP1-207ENST00000553617 MRPS28Q9Y2Q9 187 aaKnown RBP3.2□□□□□ -1.9
TDP1-207ENST00000553617 DHRS7Q9Y394 339 aa3.2□□□□□ -1.9
TDP1-207ENST00000553617 EXOSC1Q9Y3B2 195 aaKnown RBP3.2□□□□□ -1.9
TDP1-207ENST00000553617 SLCO1B1Q9Y6L6 691 aa3.2□□□□□ -1.9
TDP1-207ENST00000553617 SCRIBQ14160 1630 aa3.19□□□□□ -1.9
TDP1-207ENST00000553617 IGHV4-30-2A0A087WSY4 118 aa3.19□□□□□ -1.9
TDP1-207ENST00000553617 A0A0A6YYH2 397 aa3.19□□□□□ -1.9
TDP1-207ENST00000553617 A0A0J9YVX5 310 aa3.19□□□□□ -1.9
TDP1-207ENST00000553617 RAB19A4D1S5 217 aa3.19□□□□□ -1.9
TDP1-207ENST00000553617 SMCO2A6NFE2 343 aa3.19□□□□□ -1.9
TDP1-207ENST00000553617 A6NJ64 397 aa3.19□□□□□ -1.9
TDP1-207ENST00000553617 ARGFXA6NJG6 315 aa3.19□□□□□ -1.9
TDP1-207ENST00000553617 C9JVG2 144 aa3.19□□□□□ -1.9
TDP1-207ENST00000553617 H0YJX3 145 aa3.19□□□□□ -1.9
TDP1-207ENST00000553617 KDELR3O43731 214 aa3.19□□□□□ -1.9
TDP1-207ENST00000553617 LCMT2O60294 686 aaKnown RBP3.19□□□□□ -1.9
TDP1-207ENST00000553617 SNAP91O60641 907 aa3.19□□□□□ -1.9
TDP1-207ENST00000553617 ZNF432O94892 652 aa3.19□□□□□ -1.9
TDP1-207ENST00000553617 IGLV1-44P01699 117 aa3.19□□□□□ -1.9
TDP1-207ENST00000553617 STSP08842 583 aa3.19□□□□□ -1.9
TDP1-207ENST00000553617 OR9G9P0C7N8 305 aa3.19□□□□□ -1.9
TDP1-207ENST00000553617 TPSB2P20231 275 aa3.19□□□□□ -1.9
TDP1-207ENST00000553617 PCMT1P22061 227 aa3.19□□□□□ -1.9
TDP1-207ENST00000553617 UQCRC2P22695 453 aa3.19□□□□□ -1.9
TDP1-207ENST00000553617 S100A1P23297 94 aa3.19□□□□□ -1.9
TDP1-207ENST00000553617 PSMB6P28072 239 aa3.19□□□□□ -1.9
TDP1-207ENST00000553617 IL12BP29460 328 aa3.19□□□□□ -1.9
TDP1-207ENST00000553617 SLC1A4P43007 532 aa3.19□□□□□ -1.9
TDP1-207ENST00000553617 CSNK1DP48730 415 aa3.19□□□□□ -1.9
TDP1-207ENST00000553617 SERPINB9P50453 376 aa3.19□□□□□ -1.9
TDP1-207ENST00000553617 RGS8P57771 180 aaPredicted RBP3.19□□□□□ -1.9
TDP1-207ENST00000553617 SEC61GP60059 68 aa3.19□□□□□ -1.9
TDP1-207ENST00000553617 UBE2G2P60604 165 aa3.19□□□□□ -1.9
TDP1-207ENST00000553617 FKBP3Q00688 224 aaKnown RBP3.19□□□□□ -1.9
TDP1-207ENST00000553617 IL9RQ01113 521 aa3.19□□□□□ -1.9
TDP1-207ENST00000553617 TMEM187Q14656 261 aa3.19□□□□□ -1.9
TDP1-207ENST00000553617 SPCS2Q15005 226 aa3.19□□□□□ -1.9
TDP1-207ENST00000553617 TPSAB1Q15661 275 aa3.19□□□□□ -1.9
TDP1-207ENST00000553617 CCL14Q16627 93 aa3.19□□□□□ -1.9
TDP1-207ENST00000553617 SLC5A12Q1EHB4 618 aa3.19□□□□□ -1.9
TDP1-207ENST00000553617 CYBRD1Q53TN4 286 aa3.19□□□□□ -1.9
TDP1-207ENST00000553617 MUC21Q5SSG8 566 aa3.19□□□□□ -1.9
TDP1-207ENST00000553617 AGAP7PQ5VUJ5 663 aa3.19□□□□□ -1.9
TDP1-207ENST00000553617 MFSD14CQ5VZR4 134 aa3.19□□□□□ -1.9
TDP1-207ENST00000553617 BSPRYQ5W0U4 402 aa3.19□□□□□ -1.9
TDP1-207ENST00000553617 DPY19L4Q7Z388 723 aa3.19□□□□□ -1.9
TDP1-207ENST00000553617 SLC51BQ86UW2 128 aa3.19□□□□□ -1.9
TDP1-207ENST00000553617 ZNF683Q8IZ20 524 aa3.19□□□□□ -1.9
TDP1-207ENST00000553617 CLEC4FQ8N1N0 589 aa3.19□□□□□ -1.9
TDP1-207ENST00000553617 FBXL13Q8NEE6 735 aa3.19□□□□□ -1.9
TDP1-207ENST00000553617 OR10H4Q8NGA5 316 aa3.19□□□□□ -1.9
TDP1-207ENST00000553617 OR1B1Q8NGR6 318 aa3.19□□□□□ -1.9
TDP1-207ENST00000553617 ARNTL2Q8WYA1 636 aa3.19□□□□□ -1.9
TDP1-207ENST00000553617 FAM3CQ92520 227 aa3.19□□□□□ -1.9
TDP1-207ENST00000553617 ART4Q93070 314 aa3.19□□□□□ -1.9
TDP1-207ENST00000553617 CERS2Q96G23 380 aa3.19□□□□□ -1.9
TDP1-207ENST00000553617 TECTBQ96PL2 329 aa3.19□□□□□ -1.9
TDP1-207ENST00000553617 LGMNQ99538 433 aa3.19□□□□□ -1.9
TDP1-207ENST00000553617 SYT15Q9BQS2 421 aa3.19□□□□□ -1.9
TDP1-207ENST00000553617 TMEM175Q9BSA9 504 aa3.19□□□□□ -1.9
TDP1-207ENST00000553617 CCDC28BQ9BUN5 200 aa3.19□□□□□ -1.9
TDP1-207ENST00000553617 HINT2Q9BX68 163 aa3.19□□□□□ -1.9
TDP1-207ENST00000553617 RAB1BQ9H0U4 201 aa3.19□□□□□ -1.9
TDP1-207ENST00000553617 LIME1Q9H400 295 aa3.19□□□□□ -1.9
TDP1-207ENST00000553617 RHOJQ9H4E5 214 aa3.19□□□□□ -1.9
TDP1-207ENST00000553617 TRIM45Q9H8W5 580 aaPredicted RBP3.19□□□□□ -1.9
TDP1-207ENST00000553617 CSNK1G1Q9HCP0 422 aa3.19□□□□□ -1.9
TDP1-207ENST00000553617 C12orf4Q9NQ89 552 aa3.19□□□□□ -1.9
TDP1-207ENST00000553617 ZNF302Q9NR11 478 aa3.19□□□□□ -1.9
TDP1-207ENST00000553617 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.19□□□□□ -1.9
TDP1-207ENST00000553617 ELOVL2Q9NXB9 296 aa3.19□□□□□ -1.9
TDP1-207ENST00000553617 SLC2A8Q9NY64 477 aa3.19□□□□□ -1.9
TDP1-207ENST00000553617 WARS2Q9UGM6 360 aaKnown RBP3.19□□□□□ -1.9
TDP1-207ENST00000553617 CA5BQ9Y2D0 317 aa3.19□□□□□ -1.9
TDP1-207ENST00000553617 GSTK1Q9Y2Q3 226 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms