RNA–Protein interactions for RNA: ENST00000553508.5

PCNX1-205, Transcript of pecanex 1, humanhuman

TSL 3

Gene PCNX1, Length 645 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-205ENST00000553508 EHFQ9NZC4 300 aa4.21□□□□□ -1.74
PCNX1-205ENST00000553508 EXOSC1Q9Y3B2 195 aaKnown RBP4.21□□□□□ -1.74
PCNX1-205ENST00000553508 L3MBTL1Q9Y468 752 aa4.21□□□□□ -1.74
PCNX1-205ENST00000553508 ARID1AO14497 2285 aa4.21□□□□□ -1.74
PCNX1-205ENST00000553508 ACACBO00763 2458 aa4.21□□□□□ -1.74
PCNX1-205ENST00000553508 ANKRD11Q6UB99 2663 aaPredicted RBP4.21□□□□□ -1.74
PCNX1-205ENST00000553508 XIRP2A4UGR9 3374 aa4.21□□□□□ -1.74
PCNX1-205ENST00000553508 DHRS7CA6NNS2 312 aa4.2□□□□□ -1.74
PCNX1-205ENST00000553508 CPLX1O14810 134 aa4.2□□□□□ -1.74
PCNX1-205ENST00000553508 PPIHO43447 177 aaKnown RBP4.2□□□□□ -1.74
PCNX1-205ENST00000553508 CCNE2O96020 404 aa4.2□□□□□ -1.74
PCNX1-205ENST00000553508 SLC35G4P0C7Q5 338 aa4.2□□□□□ -1.74
PCNX1-205ENST00000553508 ZCCHC18P0CG32 403 aa4.2□□□□□ -1.74
PCNX1-205ENST00000553508 PSMA5P28066 241 aa4.2□□□□□ -1.74
PCNX1-205ENST00000553508 GPC3P51654 580 aa4.2□□□□□ -1.74
PCNX1-205ENST00000553508 HERVK_113P63132 956 aa4.2□□□□□ -1.74
PCNX1-205ENST00000553508 ERVK-8P63133 956 aa4.2□□□□□ -1.74
PCNX1-205ENST00000553508 ARF5P84085 180 aa4.2□□□□□ -1.74
PCNX1-205ENST00000553508 PLOD1Q02809 727 aaPredicted RBP4.2□□□□□ -1.74
PCNX1-205ENST00000553508 TWF2Q6IBS0 349 aaKnown RBP4.2□□□□□ -1.74
PCNX1-205ENST00000553508 FAM228AQ86W67 206 aa4.2□□□□□ -1.74
PCNX1-205ENST00000553508 ECHDC2Q86YB7 292 aa4.2□□□□□ -1.74
PCNX1-205ENST00000553508 CCDC36Q8IYA8 594 aa4.2□□□□□ -1.74
PCNX1-205ENST00000553508 ARFGAP2Q8N6H7 521 aa4.2□□□□□ -1.74
PCNX1-205ENST00000553508 MRPL43Q8N983 215 aaKnown RBP4.2□□□□□ -1.74
PCNX1-205ENST00000553508 ERVK-6Q9BXR3 956 aa4.2□□□□□ -1.74
PCNX1-205ENST00000553508 PRMT8Q9NR22 394 aaPredicted RBP4.2□□□□□ -1.74
PCNX1-205ENST00000553508 PPIAL4AQ9Y536 164 aa4.2□□□□□ -1.74
PCNX1-205ENST00000553508 KIAA1671Q9BY89 1806 aa4.2□□□□□ -1.74
PCNX1-205ENST00000553508 TPRP12270 2363 aaKnown RBP4.19□□□□□ -1.74
PCNX1-205ENST00000553508 ATG2AQ2TAZ0 1938 aa4.19□□□□□ -1.74
PCNX1-205ENST00000553508 IGLV3-22A0A075B6J6 115 aa4.19□□□□□ -1.74
PCNX1-205ENST00000553508 CHMP2AO43633 222 aa4.19□□□□□ -1.74
PCNX1-205ENST00000553508 MMP23AO75900 390 aa4.19□□□□□ -1.74
PCNX1-205ENST00000553508 SLC6A8P48029 635 aa4.19□□□□□ -1.74
PCNX1-205ENST00000553508 ZNF45Q02386 682 aa4.19□□□□□ -1.74
PCNX1-205ENST00000553508 ZP4Q12836 540 aa4.19□□□□□ -1.74
PCNX1-205ENST00000553508 LASP1Q14847 261 aaKnown RBP4.19□□□□□ -1.74
PCNX1-205ENST00000553508 OR5M10Q6IEU7 315 aa4.19□□□□□ -1.74
PCNX1-205ENST00000553508 GALNT17Q6IS24 598 aa4.19□□□□□ -1.74
PCNX1-205ENST00000553508 BLOC1S2Q6QNY1 142 aa4.19□□□□□ -1.74
PCNX1-205ENST00000553508 BTNL3Q6UXE8 466 aa4.19□□□□□ -1.74
PCNX1-205ENST00000553508 CENPQQ7L2Z9 268 aaPredicted RBP4.19□□□□□ -1.74
PCNX1-205ENST00000553508 CATSPER4Q7RTX7 472 aa4.19□□□□□ -1.74
PCNX1-205ENST00000553508 MIER3Q7Z3K6 550 aa4.19□□□□□ -1.74
PCNX1-205ENST00000553508 Q8N9L7 120 aa4.19□□□□□ -1.74
PCNX1-205ENST00000553508 CNNM3Q8NE01 707 aa4.19□□□□□ -1.74
PCNX1-205ENST00000553508 VN1R2Q8NFZ6 395 aa4.19□□□□□ -1.74
PCNX1-205ENST00000553508 CCDC43Q96MW1 224 aaKnown RBP4.19□□□□□ -1.74
PCNX1-205ENST00000553508 CWH43Q9H720 699 aa4.19□□□□□ -1.74
PCNX1-205ENST00000553508 GDAP2Q9NXN4 497 aa4.19□□□□□ -1.74
PCNX1-205ENST00000553508 PIN4Q9Y237 131 aaKnown RBP4.19□□□□□ -1.74
PCNX1-205ENST00000553508 MYH9P35579 1960 aaKnown RBP4.19□□□□□ -1.74
PCNX1-205ENST00000553508 PLXNA4Q9HCM2 1894 aa4.19□□□□□ -1.74
PCNX1-205ENST00000553508 CHD6Q8TD26 2715 aa4.19□□□□□ -1.74
PCNX1-205ENST00000553508 ARHGAP21Q5T5U3 1957 aa4.18□□□□□ -1.74
PCNX1-205ENST00000553508 NID2Q14112 1375 aa4.18□□□□□ -1.74
PCNX1-205ENST00000553508 TTC26A0AVF1 554 aa4.18□□□□□ -1.74
PCNX1-205ENST00000553508 HIDE1A8MVS5 230 aa4.18□□□□□ -1.74
PCNX1-205ENST00000553508 TBL1XO60907 577 aa4.18□□□□□ -1.74
PCNX1-205ENST00000553508 ERLIN2O94905 339 aa4.18□□□□□ -1.74
PCNX1-205ENST00000553508 DEXIO95424 95 aa4.18□□□□□ -1.74
PCNX1-205ENST00000553508 JCHAINP01591 159 aa4.18□□□□□ -1.74
PCNX1-205ENST00000553508 HPNP05981 417 aa4.18□□□□□ -1.74
PCNX1-205ENST00000553508 GCFC2P16383 781 aaKnown RBP4.18□□□□□ -1.74
PCNX1-205ENST00000553508 VDAC1P21796 283 aa4.18□□□□□ -1.74
PCNX1-205ENST00000553508 GABRR1P24046 479 aa4.18□□□□□ -1.74
PCNX1-205ENST00000553508 PSMC5P62195 406 aa4.18□□□□□ -1.74
PCNX1-205ENST00000553508 MYBPC1Q00872 1141 aa4.18□□□□□ -1.74
PCNX1-205ENST00000553508 ACTN3Q08043 901 aaPredicted RBP4.18□□□□□ -1.74
PCNX1-205ENST00000553508 TFDP1Q14186 410 aa4.18□□□□□ -1.74
PCNX1-205ENST00000553508 ELAVL3Q14576 367 aaKnown RBP4.18□□□□□ -1.74
PCNX1-205ENST00000553508 KARSQ15046 597 aaKnown RBP4.18□□□□□ -1.74
PCNX1-205ENST00000553508 TEX44Q53QW1 395 aa4.18□□□□□ -1.74
PCNX1-205ENST00000553508 CLLU1OSQ5K130 101 aa4.18□□□□□ -1.74
PCNX1-205ENST00000553508 Q6P435 159 aa4.18□□□□□ -1.74
PCNX1-205ENST00000553508 LEG1Q6P5S2 330 aa4.18□□□□□ -1.74
PCNX1-205ENST00000553508 SLC39A4Q6P5W5 647 aa4.18□□□□□ -1.74
PCNX1-205ENST00000553508 ZNF562Q6V9R5 426 aa4.18□□□□□ -1.74
PCNX1-205ENST00000553508 OTUD6AQ7L8S5 288 aa4.18□□□□□ -1.74
PCNX1-205ENST00000553508 NET1Q7Z628 596 aaPredicted RBP4.18□□□□□ -1.74
PCNX1-205ENST00000553508 CCNYQ8ND76 341 aa4.18□□□□□ -1.74
PCNX1-205ENST00000553508 NEK11Q8NG66 645 aa4.18□□□□□ -1.74
PCNX1-205ENST00000553508 ANKRD49Q8WVL7 239 aa4.18□□□□□ -1.74
PCNX1-205ENST00000553508 NEIL2Q969S2 332 aa4.18□□□□□ -1.74
PCNX1-205ENST00000553508 HAVCR1Q96D42 359 aa4.18□□□□□ -1.74
PCNX1-205ENST00000553508 CABS1Q96KC9 395 aa4.18□□□□□ -1.74
PCNX1-205ENST00000553508 TCEANC2Q96MN5 208 aa4.18□□□□□ -1.74
PCNX1-205ENST00000553508 TMEM175Q9BSA9 504 aa4.18□□□□□ -1.74
PCNX1-205ENST00000553508 NANOGQ9H9S0 305 aa4.18□□□□□ -1.74
PCNX1-205ENST00000553508 BCAP29Q9UHQ4 241 aa4.18□□□□□ -1.74
PCNX1-205ENST00000553508 LOXHD1Q8IVV2 1947 aa4.18□□□□□ -1.74
PCNX1-205ENST00000553508 SPTBN2O15020 2390 aa4.18□□□□□ -1.74
PCNX1-205ENST00000553508 KMT2EQ8IZD2 1858 aa4.18□□□□□ -1.74
PCNX1-205ENST00000553508 TRBV2A0A0J9YWF9 115 aa4.17□□□□□ -1.74
PCNX1-205ENST00000553508 SAGE2PA6NJ88 616 aa4.17□□□□□ -1.74
PCNX1-205ENST00000553508 CASKO14936 926 aa4.17□□□□□ -1.74
PCNX1-205ENST00000553508 MSH4O15457 936 aa4.17□□□□□ -1.74
PCNX1-205ENST00000553508 LYPLA1O75608 230 aaPredicted RBP4.17□□□□□ -1.74
PCNX1-205ENST00000553508 SCRG1O75711 98 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 129.7 ms